data_7R5B # _model_server_result.job_id KkPBbzJvehmZYIS7pE29pA _model_server_result.datetime_utc '2024-10-19 03:41:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r5b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7R5B # _exptl.entry_id 7R5B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7R5B _cell.length_a 37.688 _cell.length_b 44.253 _cell.length_c 78.191 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R5B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 300 n n O1 H1 P6G sing 301 n n C2 C3 P6G sing 302 n n C2 H21 P6G sing 303 n n C2 H22 P6G sing 304 n n C3 O4 P6G sing 305 n n C3 H31 P6G sing 306 n n C3 H32 P6G sing 307 n n O4 C5 P6G sing 308 n n C5 C6 P6G sing 309 n n C5 H51 P6G sing 310 n n C5 H52 P6G sing 311 n n C6 O7 P6G sing 312 n n C6 H61 P6G sing 313 n n C6 H62 P6G sing 314 n n O7 C8 P6G sing 315 n n C8 C9 P6G sing 316 n n C8 H81 P6G sing 317 n n C8 H82 P6G sing 318 n n C9 O10 P6G sing 319 n n C9 H91 P6G sing 320 n n C9 H92 P6G sing 321 n n O10 C11 P6G sing 322 n n C11 C12 P6G sing 323 n n C11 H111 P6G sing 324 n n C11 H112 P6G sing 325 n n C12 O13 P6G sing 326 n n C12 H121 P6G sing 327 n n C12 H122 P6G sing 328 n n O13 C14 P6G sing 329 n n C14 C15 P6G sing 330 n n C14 H141 P6G sing 331 n n C14 H142 P6G sing 332 n n C15 O16 P6G sing 333 n n C15 H151 P6G sing 334 n n C15 H152 P6G sing 335 n n O16 C17 P6G sing 336 n n C17 C18 P6G sing 337 n n C17 H171 P6G sing 338 n n C17 H172 P6G sing 339 n n C18 O19 P6G sing 340 n n C18 H181 P6G sing 341 n n C18 H182 P6G sing 342 n n O19 H19 P6G sing 343 n n # _atom_sites.entry_id 7R5B _atom_sites.fract_transf_matrix[1][1] 0.026534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022597 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012789 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 I5K A 1 201 201 I5K MP2 . C 3 BU3 A 1 202 202 BU3 BU3 . D 4 DMS A 1 203 203 DMS DMS . E 5 P6G A 1 204 204 P6G PG6 . F 6 HOH A 1 301 101 HOH HOH . F 6 HOH A 2 302 36 HOH HOH . F 6 HOH A 3 303 55 HOH HOH . F 6 HOH A 4 304 43 HOH HOH . F 6 HOH A 5 305 27 HOH HOH . F 6 HOH A 6 306 82 HOH HOH . F 6 HOH A 7 307 57 HOH HOH . F 6 HOH A 8 308 122 HOH HOH . F 6 HOH A 9 309 1 HOH HOH . F 6 HOH A 10 310 12 HOH HOH . F 6 HOH A 11 311 22 HOH HOH . F 6 HOH A 12 312 49 HOH HOH . F 6 HOH A 13 313 40 HOH HOH . F 6 HOH A 14 314 65 HOH HOH . F 6 HOH A 15 315 15 HOH HOH . F 6 HOH A 16 316 11 HOH HOH . F 6 HOH A 17 317 61 HOH HOH . F 6 HOH A 18 318 120 HOH HOH . F 6 HOH A 19 319 48 HOH HOH . F 6 HOH A 20 320 4 HOH HOH . F 6 HOH A 21 321 53 HOH HOH . F 6 HOH A 22 322 114 HOH HOH . F 6 HOH A 23 323 2 HOH HOH . F 6 HOH A 24 324 113 HOH HOH . F 6 HOH A 25 325 58 HOH HOH . F 6 HOH A 26 326 90 HOH HOH . F 6 HOH A 27 327 20 HOH HOH . F 6 HOH A 28 328 91 HOH HOH . F 6 HOH A 29 329 69 HOH HOH . F 6 HOH A 30 330 16 HOH HOH . F 6 HOH A 31 331 41 HOH HOH . F 6 HOH A 32 332 33 HOH HOH . F 6 HOH A 33 333 62 HOH HOH . F 6 HOH A 34 334 77 HOH HOH . F 6 HOH A 35 335 3 HOH HOH . F 6 HOH A 36 336 74 HOH HOH . F 6 HOH A 37 337 45 HOH HOH . F 6 HOH A 38 338 44 HOH HOH . F 6 HOH A 39 339 70 HOH HOH . F 6 HOH A 40 340 7 HOH HOH . F 6 HOH A 41 341 32 HOH HOH . F 6 HOH A 42 342 5 HOH HOH . F 6 HOH A 43 343 39 HOH HOH . F 6 HOH A 44 344 100 HOH HOH . F 6 HOH A 45 345 103 HOH HOH . F 6 HOH A 46 346 84 HOH HOH . F 6 HOH A 47 347 13 HOH HOH . F 6 HOH A 48 348 29 HOH HOH . F 6 HOH A 49 349 83 HOH HOH . F 6 HOH A 50 350 51 HOH HOH . F 6 HOH A 51 351 68 HOH HOH . F 6 HOH A 52 352 102 HOH HOH . F 6 HOH A 53 353 66 HOH HOH . F 6 HOH A 54 354 37 HOH HOH . F 6 HOH A 55 355 52 HOH HOH . F 6 HOH A 56 356 28 HOH HOH . F 6 HOH A 57 357 17 HOH HOH . F 6 HOH A 58 358 105 HOH HOH . F 6 HOH A 59 359 26 HOH HOH . F 6 HOH A 60 360 10 HOH HOH . F 6 HOH A 61 361 31 HOH HOH . F 6 HOH A 62 362 80 HOH HOH . F 6 HOH A 63 363 115 HOH HOH . F 6 HOH A 64 364 97 HOH HOH . F 6 HOH A 65 365 76 HOH HOH . F 6 HOH A 66 366 25 HOH HOH . F 6 HOH A 67 367 21 HOH HOH . F 6 HOH A 68 368 19 HOH HOH . F 6 HOH A 69 369 92 HOH HOH . F 6 HOH A 70 370 18 HOH HOH . F 6 HOH A 71 371 23 HOH HOH . F 6 HOH A 72 372 56 HOH HOH . F 6 HOH A 73 373 34 HOH HOH . F 6 HOH A 74 374 108 HOH HOH . F 6 HOH A 75 375 35 HOH HOH . F 6 HOH A 76 376 60 HOH HOH . F 6 HOH A 77 377 86 HOH HOH . F 6 HOH A 78 378 46 HOH HOH . F 6 HOH A 79 379 14 HOH HOH . F 6 HOH A 80 380 8 HOH HOH . F 6 HOH A 81 381 109 HOH HOH . F 6 HOH A 82 382 116 HOH HOH . F 6 HOH A 83 383 94 HOH HOH . F 6 HOH A 84 384 73 HOH HOH . F 6 HOH A 85 385 85 HOH HOH . F 6 HOH A 86 386 47 HOH HOH . F 6 HOH A 87 387 95 HOH HOH . F 6 HOH A 88 388 30 HOH HOH . F 6 HOH A 89 389 112 HOH HOH . F 6 HOH A 90 390 24 HOH HOH . F 6 HOH A 91 391 107 HOH HOH . F 6 HOH A 92 392 87 HOH HOH . F 6 HOH A 93 393 63 HOH HOH . F 6 HOH A 94 394 121 HOH HOH . F 6 HOH A 95 395 50 HOH HOH . F 6 HOH A 96 396 38 HOH HOH . F 6 HOH A 97 397 81 HOH HOH . F 6 HOH A 98 398 119 HOH HOH . F 6 HOH A 99 399 75 HOH HOH . F 6 HOH A 100 400 99 HOH HOH . F 6 HOH A 101 401 79 HOH HOH . F 6 HOH A 102 402 72 HOH HOH . F 6 HOH A 103 403 64 HOH HOH . F 6 HOH A 104 404 93 HOH HOH . F 6 HOH A 105 405 106 HOH HOH . F 6 HOH A 106 406 42 HOH HOH . F 6 HOH A 107 407 59 HOH HOH . F 6 HOH A 108 408 54 HOH HOH . F 6 HOH A 109 409 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . E 5 0.207 -13.719 5.3 0.78 51.59 ? O1 P6G 204 A 1 HETATM 2 C C2 P6G . . . E 5 -0.509 -13.946 4.092 0.78 37.21 ? C2 P6G 204 A 1 HETATM 3 C C3 P6G . . . E 5 -0.363 -15.353 3.609 0.78 46.07 ? C3 P6G 204 A 1 HETATM 4 O O4 P6G . . . E 5 -1.261 -16.198 4.309 0.78 54.72 ? O4 P6G 204 A 1 HETATM 5 C C5 P6G . . . E 5 -0.883 -16.413 5.658 0.78 44.43 ? C5 P6G 204 A 1 HETATM 6 C C6 P6G . . . E 5 -1.188 -17.815 6.036 0.78 45.03 ? C6 P6G 204 A 1 HETATM 7 O O7 P6G . . . E 5 -2.524 -18.134 5.689 0.78 40.79 ? O7 P6G 204 A 1 HETATM 8 C C8 P6G . . . E 5 -2.854 -19.467 6.036 0.78 36.25 ? C8 P6G 204 A 1 HETATM 9 C C9 P6G . . . E 5 -4.259 -19.764 5.653 0.78 46.63 ? C9 P6G 204 A 1 HETATM 10 O O10 P6G . . . E 5 -4.428 -19.591 4.257 0.78 53.84 ? O10 P6G 204 A 1 HETATM 11 C C11 P6G . . . E 5 -5.3 -20.563 3.699 0.78 47.09 ? C11 P6G 204 A 1 HETATM 12 C C12 P6G . . . E 5 -6.138 -19.967 2.622 0.78 50.19 ? C12 P6G 204 A 1 HETATM 13 O O13 P6G . . . E 5 -5.375 -19.054 1.851 0.78 46.45 ? O13 P6G 204 A 1 HETATM 14 C C14 P6G . . . E 5 -5.698 -19.088 0.471 0.78 38.46 ? C14 P6G 204 A 1 HETATM 15 C C15 P6G . . . E 5 -5.669 -17.706 -0.083 0.78 45.37 ? C15 P6G 204 A 1 HETATM 16 O O16 P6G . . . E 5 -4.561 -16.995 0.442 0.78 42.82 ? O16 P6G 204 A 1 HETATM 17 C C17 P6G . . . E 5 -3.546 -16.744 -0.511 0.78 38.87 ? C17 P6G 204 A 1 HETATM 18 C C18 P6G . . . E 5 -2.956 -15.397 -0.242 0.78 36.08 ? C18 P6G 204 A 1 HETATM 19 O O19 P6G . . . E 5 -2.517 -15.289 1.098 0.78 41.83 ? O19 P6G 204 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #