data_7R5L
#
_model_server_result.job_id            9MZ3gBokhj-YTvzle8Mi1w 
_model_server_result.datetime_utc      '2024-11-25 12:55:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7r5l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    7R5L 
#
_exptl.entry_id    7R5L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              125.129 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,6-dimethyl-2~{H}-1,2,4-triazin-5-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7R5L 
_cell.length_a            76.24 
_cell.length_b            76.24 
_cell.length_c            115.84 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7R5L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    'P 65 2 (x,y,z+1/12)' 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C5 H7 N3 O' 
_chem_comp.formula_weight    125.129 
_chem_comp.id                I4S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,6-dimethyl-2~{H}-1,2,4-triazin-5-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C09 C05 I4S sing 152 n n 
N04 C05 I4S sing 153 n n 
N04 N03 I4S sing 154 n n 
C05 N06 I4S doub 155 n n 
N03 C02 I4S doub 156 n n 
N06 C07 I4S sing 157 n n 
C02 C07 I4S sing 158 n n 
C02 C01 I4S sing 159 n n 
C07 O08 I4S doub 160 n n 
C01 H1 I4S sing 161 n n 
C01 H2 I4S sing 162 n n 
C01 H3 I4S sing 163 n n 
C09 H4 I4S sing 164 n n 
C09 H5 I4S sing 165 n n 
C09 H6 I4S sing 166 n n 
N04 H7 I4S sing 167 n n 
#
_atom_sites.entry_id                     7R5L 
_atom_sites.fract_transf_matrix[1][1]    0.013116 
_atom_sites.fract_transf_matrix[1][2]    0.007573 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015146 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008633 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 I4S A 1 601 601 I4S LIG . 
C 3 SO4 A 1 602 602 SO4 SO4 . 
D 3 SO4 A 1 603 603 SO4 SO4 . 
E 3 SO4 A 1 604 2 SO4 SO4 . 
F 3 SO4 A 1 605 3 SO4 SO4 . 
G 3 SO4 A 1 606 4 SO4 SO4 . 
H 4 HOH A 1 701 60 HOH HOH . 
H 4 HOH A 2 702 91 HOH HOH . 
H 4 HOH A 3 703 135 HOH HOH . 
H 4 HOH A 4 704 69 HOH HOH . 
H 4 HOH A 5 705 121 HOH HOH . 
H 4 HOH A 6 706 106 HOH HOH . 
H 4 HOH A 7 707 126 HOH HOH . 
H 4 HOH A 8 708 111 HOH HOH . 
H 4 HOH A 9 709 144 HOH HOH . 
H 4 HOH A 10 710 61 HOH HOH . 
H 4 HOH A 11 711 71 HOH HOH . 
H 4 HOH A 12 712 80 HOH HOH . 
H 4 HOH A 13 713 53 HOH HOH . 
H 4 HOH A 14 714 11 HOH HOH . 
H 4 HOH A 15 715 5 HOH HOH . 
H 4 HOH A 16 716 83 HOH HOH . 
H 4 HOH A 17 717 15 HOH HOH . 
H 4 HOH A 18 718 33 HOH HOH . 
H 4 HOH A 19 719 77 HOH HOH . 
H 4 HOH A 20 720 32 HOH HOH . 
H 4 HOH A 21 721 41 HOH HOH . 
H 4 HOH A 22 722 136 HOH HOH . 
H 4 HOH A 23 723 12 HOH HOH . 
H 4 HOH A 24 724 82 HOH HOH . 
H 4 HOH A 25 725 65 HOH HOH . 
H 4 HOH A 26 726 105 HOH HOH . 
H 4 HOH A 27 727 29 HOH HOH . 
H 4 HOH A 28 728 14 HOH HOH . 
H 4 HOH A 29 729 40 HOH HOH . 
H 4 HOH A 30 730 143 HOH HOH . 
H 4 HOH A 31 731 4 HOH HOH . 
H 4 HOH A 32 732 123 HOH HOH . 
H 4 HOH A 33 733 108 HOH HOH . 
H 4 HOH A 34 734 63 HOH HOH . 
H 4 HOH A 35 735 7 HOH HOH . 
H 4 HOH A 36 736 13 HOH HOH . 
H 4 HOH A 37 737 125 HOH HOH . 
H 4 HOH A 38 738 49 HOH HOH . 
H 4 HOH A 39 739 139 HOH HOH . 
H 4 HOH A 40 740 54 HOH HOH . 
H 4 HOH A 41 741 133 HOH HOH . 
H 4 HOH A 42 742 26 HOH HOH . 
H 4 HOH A 43 743 58 HOH HOH . 
H 4 HOH A 44 744 30 HOH HOH . 
H 4 HOH A 45 745 6 HOH HOH . 
H 4 HOH A 46 746 59 HOH HOH . 
H 4 HOH A 47 747 52 HOH HOH . 
H 4 HOH A 48 748 112 HOH HOH . 
H 4 HOH A 49 749 43 HOH HOH . 
H 4 HOH A 50 750 66 HOH HOH . 
H 4 HOH A 51 751 19 HOH HOH . 
H 4 HOH A 52 752 55 HOH HOH . 
H 4 HOH A 53 753 36 HOH HOH . 
H 4 HOH A 54 754 28 HOH HOH . 
H 4 HOH A 55 755 21 HOH HOH . 
H 4 HOH A 56 756 56 HOH HOH . 
H 4 HOH A 57 757 44 HOH HOH . 
H 4 HOH A 58 758 47 HOH HOH . 
H 4 HOH A 59 759 1 HOH HOH . 
H 4 HOH A 60 760 20 HOH HOH . 
H 4 HOH A 61 761 130 HOH HOH . 
H 4 HOH A 62 762 78 HOH HOH . 
H 4 HOH A 63 763 38 HOH HOH . 
H 4 HOH A 64 764 2 HOH HOH . 
H 4 HOH A 65 765 93 HOH HOH . 
H 4 HOH A 66 766 35 HOH HOH . 
H 4 HOH A 67 767 34 HOH HOH . 
H 4 HOH A 68 768 8 HOH HOH . 
H 4 HOH A 69 769 96 HOH HOH . 
H 4 HOH A 70 770 142 HOH HOH . 
H 4 HOH A 71 771 113 HOH HOH . 
H 4 HOH A 72 772 3 HOH HOH . 
H 4 HOH A 73 773 116 HOH HOH . 
H 4 HOH A 74 774 23 HOH HOH . 
H 4 HOH A 75 775 85 HOH HOH . 
H 4 HOH A 76 776 25 HOH HOH . 
H 4 HOH A 77 777 48 HOH HOH . 
H 4 HOH A 78 778 45 HOH HOH . 
H 4 HOH A 79 779 68 HOH HOH . 
H 4 HOH A 80 780 27 HOH HOH . 
H 4 HOH A 81 781 64 HOH HOH . 
H 4 HOH A 82 782 24 HOH HOH . 
H 4 HOH A 83 783 22 HOH HOH . 
H 4 HOH A 84 784 16 HOH HOH . 
H 4 HOH A 85 785 104 HOH HOH . 
H 4 HOH A 86 786 99 HOH HOH . 
H 4 HOH A 87 787 72 HOH HOH . 
H 4 HOH A 88 788 132 HOH HOH . 
H 4 HOH A 89 789 57 HOH HOH . 
H 4 HOH A 90 790 70 HOH HOH . 
H 4 HOH A 91 791 92 HOH HOH . 
H 4 HOH A 92 792 10 HOH HOH . 
H 4 HOH A 93 793 37 HOH HOH . 
H 4 HOH A 94 794 51 HOH HOH . 
H 4 HOH A 95 795 88 HOH HOH . 
H 4 HOH A 96 796 79 HOH HOH . 
H 4 HOH A 97 797 42 HOH HOH . 
H 4 HOH A 98 798 122 HOH HOH . 
H 4 HOH A 99 799 74 HOH HOH . 
H 4 HOH A 100 800 75 HOH HOH . 
H 4 HOH A 101 801 89 HOH HOH . 
H 4 HOH A 102 802 9 HOH HOH . 
H 4 HOH A 103 803 110 HOH HOH . 
H 4 HOH A 104 804 31 HOH HOH . 
H 4 HOH A 105 805 103 HOH HOH . 
H 4 HOH A 106 806 67 HOH HOH . 
H 4 HOH A 107 807 18 HOH HOH . 
H 4 HOH A 108 808 138 HOH HOH . 
H 4 HOH A 109 809 50 HOH HOH . 
H 4 HOH A 110 810 119 HOH HOH . 
H 4 HOH A 111 811 86 HOH HOH . 
H 4 HOH A 112 812 137 HOH HOH . 
H 4 HOH A 113 813 101 HOH HOH . 
H 4 HOH A 114 814 109 HOH HOH . 
H 4 HOH A 115 815 39 HOH HOH . 
H 4 HOH A 116 816 134 HOH HOH . 
H 4 HOH A 117 817 95 HOH HOH . 
H 4 HOH A 118 818 84 HOH HOH . 
H 4 HOH A 119 819 114 HOH HOH . 
H 4 HOH A 120 820 73 HOH HOH . 
H 4 HOH A 121 821 98 HOH HOH . 
H 4 HOH A 122 822 62 HOH HOH . 
H 4 HOH A 123 823 87 HOH HOH . 
H 4 HOH A 124 824 90 HOH HOH . 
H 4 HOH A 125 825 102 HOH HOH . 
H 4 HOH A 126 826 127 HOH HOH . 
H 4 HOH A 127 827 129 HOH HOH . 
H 4 HOH A 128 828 107 HOH HOH . 
H 4 HOH A 129 829 141 HOH HOH . 
H 4 HOH A 130 830 140 HOH HOH . 
H 4 HOH A 131 831 46 HOH HOH . 
H 4 HOH A 132 832 94 HOH HOH . 
H 4 HOH A 133 833 97 HOH HOH . 
H 4 HOH A 134 834 115 HOH HOH . 
H 4 HOH A 135 835 120 HOH HOH . 
H 4 HOH A 136 836 117 HOH HOH . 
H 4 HOH A 137 837 128 HOH HOH . 
H 4 HOH A 138 838 118 HOH HOH . 
H 4 HOH A 139 839 131 HOH HOH . 
H 4 HOH A 140 840 124 HOH HOH . 
H 4 HOH A 141 841 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 I4S . . . B 2 -11.615 -28.358 7.09 1 15.46 ? C01 I4S 601 A 1 
HETATM 2 C C02 I4S . . . B 2 -13.008 -27.79 6.872 1 18.35 ? C02 I4S 601 A 1 
HETATM 3 C C05 I4S . . . B 2 -15.618 -26.591 6.434 1 15.69 ? C05 I4S 601 A 1 
HETATM 4 C C07 I4S . . . B 2 -14.269 -28.598 7.033 1 15.98 ? C07 I4S 601 A 1 
HETATM 5 C C09 I4S . . . B 2 -16.947 -25.889 6.187 1 17.14 ? C09 I4S 601 A 1 
HETATM 6 N N03 I4S . . . B 2 -13.101 -26.412 6.495 1 17.27 ? N03 I4S 601 A 1 
HETATM 7 N N04 I4S . . . B 2 -14.381 -25.83 6.279 1 16.53 ? N04 I4S 601 A 1 
HETATM 8 N N06 I4S . . . B 2 -15.542 -27.994 6.809 1 16.35 ? N06 I4S 601 A 1 
HETATM 9 O O08 I4S . . . B 2 -14.232 -29.744 7.35 1 17.69 ? O08 I4S 601 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           9 
#