data_7R61 # _model_server_result.job_id 7iTPfsOaXJ7V3gQDy4cCDA _model_server_result.datetime_utc '2024-11-15 03:19:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r61 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 7R61 # _exptl.entry_id 7R61 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7R61 _cell.length_a 70.646 _cell.length_b 104.076 _cell.length_c 38.09 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R61 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 92 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 481 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C30 _struct_conn.ptnr2_label_comp_id 2IJ _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 2IJ _struct_conn.ptnr2_auth_seq_id 701 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.696 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 141 n n S C1 DMS sing 142 n n S C2 DMS sing 143 n n C1 H11 DMS sing 144 n n C1 H12 DMS sing 145 n n C1 H13 DMS sing 146 n n C2 H21 DMS sing 147 n n C2 H22 DMS sing 148 n n C2 H23 DMS sing 149 n n # _atom_sites.entry_id 7R61 _atom_sites.fract_transf_matrix[1][1] 0.014155 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009608 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026254 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2IJ A 1 701 0 2IJ INH . C 3 DMS A 1 702 1 DMS DMS . D 3 DMS A 1 703 2 DMS DMS . E 4 HOH A 1 801 89 HOH HOH . E 4 HOH A 2 802 105 HOH HOH . E 4 HOH A 3 803 64 HOH HOH . E 4 HOH A 4 804 9 HOH HOH . E 4 HOH A 5 805 67 HOH HOH . E 4 HOH A 6 806 92 HOH HOH . E 4 HOH A 7 807 44 HOH HOH . E 4 HOH A 8 808 15 HOH HOH . E 4 HOH A 9 809 43 HOH HOH . E 4 HOH A 10 810 58 HOH HOH . E 4 HOH A 11 811 93 HOH HOH . E 4 HOH A 12 812 63 HOH HOH . E 4 HOH A 13 813 54 HOH HOH . E 4 HOH A 14 814 46 HOH HOH . E 4 HOH A 15 815 70 HOH HOH . E 4 HOH A 16 816 33 HOH HOH . E 4 HOH A 17 817 84 HOH HOH . E 4 HOH A 18 818 88 HOH HOH . E 4 HOH A 19 819 37 HOH HOH . E 4 HOH A 20 820 55 HOH HOH . E 4 HOH A 21 821 16 HOH HOH . E 4 HOH A 22 822 79 HOH HOH . E 4 HOH A 23 823 90 HOH HOH . E 4 HOH A 24 824 24 HOH HOH . E 4 HOH A 25 825 73 HOH HOH . E 4 HOH A 26 826 91 HOH HOH . E 4 HOH A 27 827 66 HOH HOH . E 4 HOH A 28 828 42 HOH HOH . E 4 HOH A 29 829 5 HOH HOH . E 4 HOH A 30 830 77 HOH HOH . E 4 HOH A 31 831 11 HOH HOH . E 4 HOH A 32 832 41 HOH HOH . E 4 HOH A 33 833 78 HOH HOH . E 4 HOH A 34 834 48 HOH HOH . E 4 HOH A 35 835 4 HOH HOH . E 4 HOH A 36 836 25 HOH HOH . E 4 HOH A 37 837 95 HOH HOH . E 4 HOH A 38 838 22 HOH HOH . E 4 HOH A 39 839 8 HOH HOH . E 4 HOH A 40 840 47 HOH HOH . E 4 HOH A 41 841 36 HOH HOH . E 4 HOH A 42 842 76 HOH HOH . E 4 HOH A 43 843 6 HOH HOH . E 4 HOH A 44 844 49 HOH HOH . E 4 HOH A 45 845 23 HOH HOH . E 4 HOH A 46 846 7 HOH HOH . E 4 HOH A 47 847 1 HOH HOH . E 4 HOH A 48 848 56 HOH HOH . E 4 HOH A 49 849 102 HOH HOH . E 4 HOH A 50 850 101 HOH HOH . E 4 HOH A 51 851 19 HOH HOH . E 4 HOH A 52 852 51 HOH HOH . E 4 HOH A 53 853 98 HOH HOH . E 4 HOH A 54 854 86 HOH HOH . E 4 HOH A 55 855 52 HOH HOH . E 4 HOH A 56 856 3 HOH HOH . E 4 HOH A 57 857 18 HOH HOH . E 4 HOH A 58 858 53 HOH HOH . E 4 HOH A 59 859 57 HOH HOH . E 4 HOH A 60 860 74 HOH HOH . E 4 HOH A 61 861 59 HOH HOH . E 4 HOH A 62 862 2 HOH HOH . E 4 HOH A 63 863 40 HOH HOH . E 4 HOH A 64 864 75 HOH HOH . E 4 HOH A 65 865 97 HOH HOH . E 4 HOH A 66 866 104 HOH HOH . E 4 HOH A 67 867 28 HOH HOH . E 4 HOH A 68 868 30 HOH HOH . E 4 HOH A 69 869 65 HOH HOH . E 4 HOH A 70 870 94 HOH HOH . E 4 HOH A 71 871 61 HOH HOH . E 4 HOH A 72 872 26 HOH HOH . E 4 HOH A 73 873 68 HOH HOH . E 4 HOH A 74 874 38 HOH HOH . E 4 HOH A 75 875 50 HOH HOH . E 4 HOH A 76 876 14 HOH HOH . E 4 HOH A 77 877 21 HOH HOH . E 4 HOH A 78 878 96 HOH HOH . E 4 HOH A 79 879 39 HOH HOH . E 4 HOH A 80 880 45 HOH HOH . E 4 HOH A 81 881 100 HOH HOH . E 4 HOH A 82 882 20 HOH HOH . E 4 HOH A 83 883 13 HOH HOH . E 4 HOH A 84 884 35 HOH HOH . E 4 HOH A 85 885 12 HOH HOH . E 4 HOH A 86 886 17 HOH HOH . E 4 HOH A 87 887 32 HOH HOH . E 4 HOH A 88 888 85 HOH HOH . E 4 HOH A 89 889 71 HOH HOH . E 4 HOH A 90 890 10 HOH HOH . E 4 HOH A 91 891 29 HOH HOH . E 4 HOH A 92 892 31 HOH HOH . E 4 HOH A 93 893 80 HOH HOH . E 4 HOH A 94 894 69 HOH HOH . E 4 HOH A 95 895 83 HOH HOH . E 4 HOH A 96 896 81 HOH HOH . E 4 HOH A 97 897 62 HOH HOH . E 4 HOH A 98 898 27 HOH HOH . E 4 HOH A 99 899 99 HOH HOH . E 4 HOH A 100 900 82 HOH HOH . E 4 HOH A 101 901 103 HOH HOH . E 4 HOH A 102 902 72 HOH HOH . E 4 HOH A 103 903 34 HOH HOH . E 4 HOH A 104 904 60 HOH HOH . E 4 HOH A 105 905 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 22.715 33.832 -4.807 1 41.97 ? S DMS 703 A 1 HETATM 2 O O DMS . . . D 3 23.416 32.481 -4.791 1 34.91 ? O DMS 703 A 1 HETATM 3 C C1 DMS . . . D 3 22.249 34.279 -6.429 1 40.23 ? C1 DMS 703 A 1 HETATM 4 C C2 DMS . . . D 3 21.111 33.943 -4.208 1 28.59 ? C2 DMS 703 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #