data_7R89 # _model_server_result.job_id rQKumyTj5y_QyWXgAPEJbg _model_server_result.datetime_utc '2024-12-26 10:26:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r89 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":901}' # _entry.id 7R89 # _exptl.entry_id 7R89 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 396.648 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ERGOSTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7R89 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R89 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 587 A CYS 587 1_555 A SG CYS 600 A CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 C SG CYS 41 C CYS 41 1_555 C SG CYS 117 C CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 D SG CYS 43 D CYS 43 1_555 D SG CYS 108 D CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C28 H44 O' _chem_comp.formula_weight 396.648 _chem_comp.id ERG _chem_comp.mon_nstd_flag . _chem_comp.name ERGOSTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ERG sing 83 n n C1 C10 ERG sing 84 n n C1 H11 ERG sing 85 n n C1 H12 ERG sing 86 n n C2 C3 ERG sing 87 n n C2 H21 ERG sing 88 n n C2 H22A ERG sing 89 n n C3 C4 ERG sing 90 n n C3 O1 ERG sing 91 n n C3 H3 ERG sing 92 n n C4 C5 ERG sing 93 n n C4 H41 ERG sing 94 n n C4 H42 ERG sing 95 n n C5 C6 ERG doub 96 n n C5 C10 ERG sing 97 n n C6 C7 ERG sing 98 n n C6 H6 ERG sing 99 n n C7 C8 ERG doub 100 n n C7 H7 ERG sing 101 n n C8 C9 ERG sing 102 n n C8 C14 ERG sing 103 n n C9 C10 ERG sing 104 n n C9 C11 ERG sing 105 n n C9 H9 ERG sing 106 n n C10 C19 ERG sing 107 n n C11 C12 ERG sing 108 n n C11 H111 ERG sing 109 n n C11 H112 ERG sing 110 n n C12 C13 ERG sing 111 n n C12 H121 ERG sing 112 n n C12 H122 ERG sing 113 n n C13 C14 ERG sing 114 n n C13 C17 ERG sing 115 n n C13 C18 ERG sing 116 n n C14 C15 ERG sing 117 n n C14 H14 ERG sing 118 n n C15 C16 ERG sing 119 n n C15 H151 ERG sing 120 n n C15 H152 ERG sing 121 n n C16 C17 ERG sing 122 n n C16 H161 ERG sing 123 n n C16 H162 ERG sing 124 n n C17 C20 ERG sing 125 n n C17 H17 ERG sing 126 n n C18 H181 ERG sing 127 n n C18 H182 ERG sing 128 n n C18 H183 ERG sing 129 n n C19 H191 ERG sing 130 n n C19 H192 ERG sing 131 n n C19 H193 ERG sing 132 n n C20 C21 ERG sing 133 n n C20 C22 ERG sing 134 n n C20 H20 ERG sing 135 n n C21 H211 ERG sing 136 n n C21 H212 ERG sing 137 n n C21 H213 ERG sing 138 n n C22 C23 ERG doub 139 e n C22 H22 ERG sing 140 n n C23 C24 ERG sing 141 n n C23 H23 ERG sing 142 n n C24 C25 ERG sing 143 n n C24 C28 ERG sing 144 n n C24 H24 ERG sing 145 n n C25 C26 ERG sing 146 n n C25 C27 ERG sing 147 n n C25 H25 ERG sing 148 n n C26 H261 ERG sing 149 n n C26 H262 ERG sing 150 n n C26 H263 ERG sing 151 n n C27 H271 ERG sing 152 n n C27 H272 ERG sing 153 n n C27 H273 ERG sing 154 n n C28 H281 ERG sing 155 n n C28 H282 ERG sing 156 n n C28 H283 ERG sing 157 n n O1 HO1 ERG sing 158 n n # _atom_sites.entry_id 7R89 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id ERG _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 901 _pdbx_nonpoly_scheme.auth_seq_num 901 _pdbx_nonpoly_scheme.pdb_mon_id ERG _pdbx_nonpoly_scheme.auth_mon_id ERG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ERG . . . E 5 1.336 -10.859 0.923 1 72.42 ? C1 ERG 901 B 1 HETATM 2 C C2 ERG . . . E 5 2.115 -12.081 0.429 1 72.42 ? C2 ERG 901 B 1 HETATM 3 C C3 ERG . . . E 5 1.744 -12.381 -1.022 1 72.42 ? C3 ERG 901 B 1 HETATM 4 C C4 ERG . . . E 5 2.2 -11.212 -1.898 1 72.42 ? C4 ERG 901 B 1 HETATM 5 C C5 ERG . . . E 5 1.573 -9.936 -1.365 1 72.42 ? C5 ERG 901 B 1 HETATM 6 C C6 ERG . . . E 5 1.091 -9.069 -2.24 1 72.42 ? C6 ERG 901 B 1 HETATM 7 C C7 ERG . . . E 5 0.468 -7.82 -1.792 1 72.42 ? C7 ERG 901 B 1 HETATM 8 C C8 ERG . . . E 5 0.425 -7.51 -0.513 1 72.42 ? C8 ERG 901 B 1 HETATM 9 C C9 ERG . . . E 5 0.932 -8.419 0.566 1 72.42 ? C9 ERG 901 B 1 HETATM 10 C C10 ERG . . . E 5 1.702 -9.624 0.092 1 72.42 ? C10 ERG 901 B 1 HETATM 11 C C11 ERG . . . E 5 1.654 -7.606 1.641 1 72.42 ? C11 ERG 901 B 1 HETATM 12 C C12 ERG . . . E 5 0.819 -6.398 2.109 1 72.42 ? C12 ERG 901 B 1 HETATM 13 C C13 ERG . . . E 5 0.46 -5.519 0.936 1 72.42 ? C13 ERG 901 B 1 HETATM 14 C C14 ERG . . . E 5 -0.423 -6.362 -0.033 1 72.42 ? C14 ERG 901 B 1 HETATM 15 C C15 ERG . . . E 5 -0.823 -5.311 -1.069 1 72.42 ? C15 ERG 901 B 1 HETATM 16 C C16 ERG . . . E 5 -1.18 -4.093 -0.17 1 72.42 ? C16 ERG 901 B 1 HETATM 17 C C17 ERG . . . E 5 -0.417 -4.29 1.167 1 72.42 ? C17 ERG 901 B 1 HETATM 18 C C18 ERG . . . E 5 1.729 -5.105 0.184 1 72.42 ? C18 ERG 901 B 1 HETATM 19 C C19 ERG . . . E 5 3.189 -9.359 0.339 1 72.42 ? C19 ERG 901 B 1 HETATM 20 C C20 ERG . . . E 5 0.393 -3.029 1.505 1 72.42 ? C20 ERG 901 B 1 HETATM 21 C C21 ERG . . . E 5 0.754 -3.001 2.995 1 72.42 ? C21 ERG 901 B 1 HETATM 22 C C22 ERG . . . E 5 -0.424 -1.8 1.193 1 72.42 ? C22 ERG 901 B 1 HETATM 23 C C23 ERG . . . E 5 -1.313 -1.375 2.056 1 72.42 ? C23 ERG 901 B 1 HETATM 24 C C24 ERG . . . E 5 -1.714 0.077 2.094 1 72.42 ? C24 ERG 901 B 1 HETATM 25 C C25 ERG . . . E 5 -2.472 0.357 3.392 1 72.42 ? C25 ERG 901 B 1 HETATM 26 C C26 ERG . . . E 5 -2.883 1.829 3.443 1 72.42 ? C26 ERG 901 B 1 HETATM 27 C C27 ERG . . . E 5 -3.722 -0.524 3.451 1 72.42 ? C27 ERG 901 B 1 HETATM 28 C C28 ERG . . . E 5 -0.46 0.952 2.035 1 72.42 ? C28 ERG 901 B 1 HETATM 29 O O1 ERG . . . E 5 2.397 -13.579 -1.446 1 72.42 ? O1 ERG 901 B 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #