data_7R8E # _model_server_result.job_id I2SVAnENgzKn1xdlpZ3OhA _model_server_result.datetime_utc '2025-07-03 23:03:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 7R8E # _exptl.entry_id 7R8E _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7R8E _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 611 A CYS 611 1_555 A SG CYS 617 A CYS 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 B SG CYS 611 B CYS 611 1_555 B SG CYS 617 B CYS 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc1 A OG SER 125 A SER 125 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc2 A OE1 GLN 242 A GLN 242 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc3 C O2G ATP . A ATP 701 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc4 B OG SER 125 B SER 125 1_555 G MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? metalc ? metalc5 B OE1 GLN 242 B GLN 242 1_555 G MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc6 F O2G ATP . B ATP 701 1_555 G MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 119 n n C1 C10 CLR sing 120 n n C1 H11 CLR sing 121 n n C1 H12 CLR sing 122 n n C2 C3 CLR sing 123 n n C2 H21 CLR sing 124 n n C2 H22 CLR sing 125 n n C3 C4 CLR sing 126 n n C3 O1 CLR sing 127 n n C3 H3 CLR sing 128 n n C4 C5 CLR sing 129 n n C4 H41 CLR sing 130 n n C4 H42 CLR sing 131 n n C5 C6 CLR doub 132 n n C5 C10 CLR sing 133 n n C6 C7 CLR sing 134 n n C6 H6 CLR sing 135 n n C7 C8 CLR sing 136 n n C7 H71 CLR sing 137 n n C7 H72 CLR sing 138 n n C8 C9 CLR sing 139 n n C8 C14 CLR sing 140 n n C8 H8 CLR sing 141 n n C9 C10 CLR sing 142 n n C9 C11 CLR sing 143 n n C9 H9 CLR sing 144 n n C10 C19 CLR sing 145 n n C11 C12 CLR sing 146 n n C11 H111 CLR sing 147 n n C11 H112 CLR sing 148 n n C12 C13 CLR sing 149 n n C12 H121 CLR sing 150 n n C12 H122 CLR sing 151 n n C13 C14 CLR sing 152 n n C13 C17 CLR sing 153 n n C13 C18 CLR sing 154 n n C14 C15 CLR sing 155 n n C14 H14 CLR sing 156 n n C15 C16 CLR sing 157 n n C15 H151 CLR sing 158 n n C15 H152 CLR sing 159 n n C16 C17 CLR sing 160 n n C16 H161 CLR sing 161 n n C16 H162 CLR sing 162 n n C17 C20 CLR sing 163 n n C17 H17 CLR sing 164 n n C18 H181 CLR sing 165 n n C18 H182 CLR sing 166 n n C18 H183 CLR sing 167 n n C19 H191 CLR sing 168 n n C19 H192 CLR sing 169 n n C19 H193 CLR sing 170 n n C20 C21 CLR sing 171 n n C20 C22 CLR sing 172 n n C20 H20 CLR sing 173 n n C21 H211 CLR sing 174 n n C21 H212 CLR sing 175 n n C21 H213 CLR sing 176 n n C22 C23 CLR sing 177 n n C22 H221 CLR sing 178 n n C22 H222 CLR sing 179 n n C23 C24 CLR sing 180 n n C23 H231 CLR sing 181 n n C23 H232 CLR sing 182 n n C24 C25 CLR sing 183 n n C24 H241 CLR sing 184 n n C24 H242 CLR sing 185 n n C25 C26 CLR sing 186 n n C25 C27 CLR sing 187 n n C25 H25 CLR sing 188 n n C26 H261 CLR sing 189 n n C26 H262 CLR sing 190 n n C26 H263 CLR sing 191 n n C27 H271 CLR sing 192 n n C27 H272 CLR sing 193 n n C27 H273 CLR sing 194 n n O1 H1 CLR sing 195 n n # _atom_sites.entry_id 7R8E _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ATP A 1 701 701 ATP ATP . D 3 MG A 1 702 702 MG MG . E 4 CLR A 1 703 703 CLR CLR . F 2 ATP B 1 701 701 ATP ATP . G 3 MG B 1 702 702 MG MG . H 4 CLR B 1 703 703 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . E 4 128.141 116.318 86.137 1 25.27 ? C1 CLR 703 A 1 HETATM 2 C C2 CLR . . . E 4 129.23 116.221 85.074 1 25.68 ? C2 CLR 703 A 1 HETATM 3 C C3 CLR . . . E 4 129.564 117.589 84.489 1 25.73 ? C3 CLR 703 A 1 HETATM 4 C C4 CLR . . . E 4 130.027 118.527 85.597 1 25.38 ? C4 CLR 703 A 1 HETATM 5 C C5 CLR . . . E 4 128.995 118.532 86.697 1 25.09 ? C5 CLR 703 A 1 HETATM 6 C C6 CLR . . . E 4 128.475 119.705 87.095 1 25.03 ? C6 CLR 703 A 1 HETATM 7 C C7 CLR . . . E 4 127.482 119.818 88.226 1 24.81 ? C7 CLR 703 A 1 HETATM 8 C C8 CLR . . . E 4 127.649 118.617 89.136 1 24.54 ? C8 CLR 703 A 1 HETATM 9 C C9 CLR . . . E 4 127.488 117.334 88.328 1 24.76 ? C9 CLR 703 A 1 HETATM 10 C C10 CLR . . . E 4 128.598 117.202 87.29 1 24.92 ? C10 CLR 703 A 1 HETATM 11 C C11 CLR . . . E 4 127.425 116.073 89.199 1 24.99 ? C11 CLR 703 A 1 HETATM 12 C C12 CLR . . . E 4 126.52 116.199 90.426 1 24.7 ? C12 CLR 703 A 1 HETATM 13 C C13 CLR . . . E 4 126.922 117.458 91.169 1 24.18 ? C13 CLR 703 A 1 HETATM 14 C C14 CLR . . . E 4 126.63 118.622 90.258 1 24.21 ? C14 CLR 703 A 1 HETATM 15 C C15 CLR . . . E 4 126.601 119.839 91.168 1 24.02 ? C15 CLR 703 A 1 HETATM 16 C C16 CLR . . . E 4 126.071 119.301 92.498 1 23.85 ? C16 CLR 703 A 1 HETATM 17 C C17 CLR . . . E 4 126.168 117.777 92.446 1 23.76 ? C17 CLR 703 A 1 HETATM 18 C C18 CLR . . . E 4 128.415 117.411 91.47 1 24.12 ? C18 CLR 703 A 1 HETATM 19 C C19 CLR . . . E 4 129.835 116.596 87.94 1 24.72 ? C19 CLR 703 A 1 HETATM 20 C C20 CLR . . . E 4 126.874 117.218 93.672 1 23.44 ? C20 CLR 703 A 1 HETATM 21 C C21 CLR . . . E 4 126.475 115.769 93.925 1 23.41 ? C21 CLR 703 A 1 HETATM 22 C C22 CLR . . . E 4 126.613 118.093 94.893 1 23.3 ? C22 CLR 703 A 1 HETATM 23 C C23 CLR . . . E 4 127.242 117.499 96.147 1 23.35 ? C23 CLR 703 A 1 HETATM 24 C C24 CLR . . . E 4 126.262 116.586 96.874 1 23.35 ? C24 CLR 703 A 1 HETATM 25 C C25 CLR . . . E 4 125.131 117.393 97.501 1 23.37 ? C25 CLR 703 A 1 HETATM 26 C C26 CLR . . . E 4 124.212 117.973 96.433 1 23.32 ? C26 CLR 703 A 1 HETATM 27 C C27 CLR . . . E 4 124.345 116.553 98.5 1 23.4 ? C27 CLR 703 A 1 HETATM 28 O O1 CLR . . . E 4 130.606 117.454 83.515 1 26.29 ? O1 CLR 703 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #