data_7RAN # _model_server_result.job_id pRW9AgkrHIt7q6Yd4HkNmw _model_server_result.datetime_utc '2024-11-21 13:45:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ran # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 7RAN # _exptl.entry_id 7RAN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 214.286 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R)-3-methyl-5-(1H-pyrrolo[2,3-b]pyridin-3-yl)-1,2,3,6-tetrahydropyridin-1-ium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RAN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RAN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 83 A CYS 148 1_555 A SG CYS 162 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 E SG CYS 60 E CYS 22 1_555 E SG CYS 134 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 E SG CYS 197 E CYS 147 1_555 E SG CYS 267 E CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C13 H16 N3 1' _chem_comp.formula_weight 214.286 _chem_comp.id 3IQ _chem_comp.mon_nstd_flag . _chem_comp.name (3R)-3-methyl-5-(1H-pyrrolo[2,3-b]pyridin-3-yl)-1,2,3,6-tetrahydropyridin-1-ium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C3 3IQ doub 1 n y C4 N 3IQ sing 2 n y C3 C2 3IQ sing 3 n y N C 3IQ doub 4 n y C2 C1 3IQ doub 5 n y C C1 3IQ sing 6 n y C N1 3IQ sing 7 n y C1 C5 3IQ sing 8 n y C8 C9 3IQ sing 9 n n C8 C7 3IQ doub 10 n n N1 C6 3IQ sing 11 n y C12 C9 3IQ sing 12 n n C5 C6 3IQ doub 13 n y C5 C7 3IQ sing 14 n n C9 C10 3IQ sing 15 n n C7 C11 3IQ sing 16 n n C10 N2 3IQ sing 17 n n C11 N2 3IQ sing 18 n n C10 H1 3IQ sing 19 n n C10 H2 3IQ sing 20 n n C11 H3 3IQ sing 21 n n C11 H4 3IQ sing 22 n n C12 H5 3IQ sing 23 n n C12 H6 3IQ sing 24 n n C12 H7 3IQ sing 25 n n C2 H8 3IQ sing 26 n n C3 H9 3IQ sing 27 n n C4 H10 3IQ sing 28 n n C6 H11 3IQ sing 29 n n C8 H12 3IQ sing 30 n n C9 H13 3IQ sing 31 n n N1 H14 3IQ sing 32 n n N2 H15 3IQ sing 33 n n N2 H16 3IQ sing 34 n n # _atom_sites.entry_id 7RAN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id 3IQ _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 3IQ _pdbx_nonpoly_scheme.auth_mon_id 366 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 3IQ . . . F 6 154.653 152.676 133.548 1 45.54 ? C10 3IQ 501 A 1 HETATM 2 N N 3IQ . . . F 6 148.62 156.198 130.172 1 45.54 ? N 3IQ 501 A 1 HETATM 3 C C 3IQ . . . F 6 149.282 155.295 130.905 1 45.54 ? C 3IQ 501 A 1 HETATM 4 C C1 3IQ . . . F 6 150.676 155.201 131.043 1 45.54 ? C1 3IQ 501 A 1 HETATM 5 C C11 3IQ . . . F 6 152.236 152.979 133.783 1 45.54 ? C11 3IQ 501 A 1 HETATM 6 C C12 3IQ . . . F 6 155.773 153.996 131.715 1 45.54 ? C12 3IQ 501 A 1 HETATM 7 C C2 3IQ . . . F 6 151.44 156.134 130.351 1 45.54 ? C2 3IQ 501 A 1 HETATM 8 C C3 3IQ . . . F 6 150.787 157.086 129.58 1 45.54 ? C3 3IQ 501 A 1 HETATM 9 C C4 3IQ . . . F 6 149.398 157.078 129.522 1 45.54 ? C4 3IQ 501 A 1 HETATM 10 C C5 3IQ . . . F 6 150.921 154.083 131.927 1 45.54 ? C5 3IQ 501 A 1 HETATM 11 C C6 3IQ . . . F 6 149.686 153.583 132.262 1 45.54 ? C6 3IQ 501 A 1 HETATM 12 C C7 3IQ . . . F 6 152.213 153.552 132.394 1 45.54 ? C7 3IQ 501 A 1 HETATM 13 C C8 3IQ . . . F 6 153.317 153.555 131.647 1 45.54 ? C8 3IQ 501 A 1 HETATM 14 C C9 3IQ . . . F 6 154.652 153.016 132.057 1 45.54 ? C9 3IQ 501 A 1 HETATM 15 N N1 3IQ . . . F 6 148.701 154.305 131.652 1 45.54 ? N1 3IQ 501 A 1 HETATM 16 N N2 3IQ . . . F 6 153.371 152.027 133.942 1 45.54 ? N2 3IQ 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #