data_7RBW # _model_server_result.job_id u1U7q2KTRB6waJIrpvK6Hg _model_server_result.datetime_utc '2024-10-19 13:18:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rbw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 7RBW # _exptl.entry_id 7RBW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 582.646 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BILIVERDINE IX ALPHA' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RBW _cell.length_a 72.069 _cell.length_b 75.91 _cell.length_c 143.751 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RBW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C33 H34 N4 O6' _chem_comp.formula_weight 582.646 _chem_comp.id BLA _chem_comp.mon_nstd_flag . _chem_comp.name 'BILIVERDINE IX ALPHA' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A BLA sing 70 n n CHA C4D BLA doub 71 z n CHA HHA BLA sing 72 n n NA C1A BLA sing 73 n y NA C4A BLA sing 74 n y NA HA BLA sing 75 n n C1A C2A BLA doub 76 n y C2A C3A BLA sing 77 n y C2A CAA BLA sing 78 n n C3A C4A BLA doub 79 n y C3A CMA BLA sing 80 n n C4A CHB BLA sing 81 n n CMA HMA1 BLA sing 82 n n CMA HMA2 BLA sing 83 n n CMA HMA3 BLA sing 84 n n CAA CBA BLA sing 85 n n CAA HAA1 BLA sing 86 n n CAA HAA2 BLA sing 87 n n CBA CGA BLA sing 88 n n CBA HBA1 BLA sing 89 n n CBA HBA2 BLA sing 90 n n CGA O1A BLA doub 91 n n CGA O2A BLA sing 92 n n O2A H2A BLA sing 93 n n CHB C1B BLA doub 94 z n CHB HHB BLA sing 95 n n NB C1B BLA sing 96 n n NB C4B BLA sing 97 n n NB HB BLA sing 98 n n C1B C2B BLA sing 99 n n C2B C3B BLA doub 100 n n C2B CMB BLA sing 101 n n C3B C4B BLA sing 102 n n C3B CAB BLA sing 103 n n C4B OB BLA doub 104 n n CMB HMB1 BLA sing 105 n n CMB HMB2 BLA sing 106 n n CMB HMB3 BLA sing 107 n n CAB CBB BLA doub 108 n n CAB HAB BLA sing 109 n n CBB HBB1 BLA sing 110 n n CBB HBB2 BLA sing 111 n n NC C1C BLA sing 112 n n NC C4C BLA sing 113 n n NC HC BLA sing 114 n n C1C C2C BLA sing 115 n n C1C OC BLA doub 116 n n C2C C3C BLA doub 117 n n C2C CMC BLA sing 118 n n C3C C4C BLA sing 119 n n C3C CAC BLA sing 120 n n C4C CHD BLA doub 121 z n CMC HMC1 BLA sing 122 n n CMC HMC2 BLA sing 123 n n CMC HMC3 BLA sing 124 n n CAC CBC BLA doub 125 n n CAC HAC BLA sing 126 n n CBC HBC1 BLA sing 127 n n CBC HBC2 BLA sing 128 n n CHD C1D BLA sing 129 n n CHD HHD BLA sing 130 n n ND C1D BLA doub 131 n n ND C4D BLA sing 132 n n C1D C2D BLA sing 133 n n C2D C3D BLA doub 134 n n C2D CMD BLA sing 135 n n C3D C4D BLA sing 136 n n C3D CAD BLA sing 137 n n CMD HMD1 BLA sing 138 n n CMD HMD2 BLA sing 139 n n CMD HMD3 BLA sing 140 n n CAD CBD BLA sing 141 n n CAD HAD1 BLA sing 142 n n CAD HAD2 BLA sing 143 n n CBD CGD BLA sing 144 n n CBD HBD1 BLA sing 145 n n CBD HBD2 BLA sing 146 n n CGD O1D BLA doub 147 n n CGD O2D BLA sing 148 n n O2D H2D BLA sing 149 n n # _atom_sites.entry_id 7RBW _atom_sites.fract_transf_matrix[1][1] 0.013876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013173 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006956 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BLA A 1 501 501 BLA BLA . D 2 BLA B 1 501 501 BLA BLA . E 3 HOH A 1 601 601 HOH HOH . E 3 HOH A 2 602 602 HOH HOH . E 3 HOH A 3 603 603 HOH HOH . E 3 HOH A 4 604 604 HOH HOH . E 3 HOH A 5 605 605 HOH HOH . E 3 HOH A 6 606 606 HOH HOH . E 3 HOH A 7 607 607 HOH HOH . E 3 HOH A 8 608 608 HOH HOH . E 3 HOH A 9 609 609 HOH HOH . E 3 HOH A 10 610 610 HOH HOH . E 3 HOH A 11 611 611 HOH HOH . E 3 HOH A 12 612 612 HOH HOH . E 3 HOH A 13 613 613 HOH HOH . E 3 HOH A 14 614 614 HOH HOH . E 3 HOH A 15 615 615 HOH HOH . E 3 HOH A 16 616 616 HOH HOH . E 3 HOH A 17 617 617 HOH HOH . E 3 HOH A 18 618 618 HOH HOH . E 3 HOH A 19 619 619 HOH HOH . E 3 HOH A 20 620 620 HOH HOH . E 3 HOH A 21 621 621 HOH HOH . E 3 HOH A 22 622 622 HOH HOH . E 3 HOH A 23 623 623 HOH HOH . E 3 HOH A 24 624 624 HOH HOH . E 3 HOH A 25 625 625 HOH HOH . E 3 HOH A 26 626 626 HOH HOH . E 3 HOH A 27 627 627 HOH HOH . E 3 HOH A 28 628 628 HOH HOH . E 3 HOH A 29 629 629 HOH HOH . E 3 HOH A 30 630 630 HOH HOH . E 3 HOH A 31 631 631 HOH HOH . E 3 HOH A 32 632 632 HOH HOH . E 3 HOH A 33 633 633 HOH HOH . E 3 HOH A 34 634 634 HOH HOH . E 3 HOH A 35 635 635 HOH HOH . E 3 HOH A 36 636 636 HOH HOH . E 3 HOH A 37 637 637 HOH HOH . E 3 HOH A 38 638 638 HOH HOH . E 3 HOH A 39 639 639 HOH HOH . E 3 HOH A 40 640 640 HOH HOH . E 3 HOH A 41 641 641 HOH HOH . E 3 HOH A 42 642 642 HOH HOH . E 3 HOH A 43 643 643 HOH HOH . E 3 HOH A 44 644 644 HOH HOH . E 3 HOH A 45 645 645 HOH HOH . E 3 HOH A 46 646 646 HOH HOH . E 3 HOH A 47 647 647 HOH HOH . E 3 HOH A 48 648 648 HOH HOH . E 3 HOH A 49 649 649 HOH HOH . E 3 HOH A 50 650 650 HOH HOH . E 3 HOH A 51 651 651 HOH HOH . E 3 HOH A 52 652 652 HOH HOH . E 3 HOH A 53 653 653 HOH HOH . E 3 HOH A 54 654 654 HOH HOH . E 3 HOH A 55 655 655 HOH HOH . E 3 HOH A 56 656 656 HOH HOH . E 3 HOH A 57 657 657 HOH HOH . E 3 HOH A 58 658 658 HOH HOH . E 3 HOH A 59 659 659 HOH HOH . E 3 HOH A 60 660 660 HOH HOH . E 3 HOH A 61 661 661 HOH HOH . E 3 HOH A 62 662 662 HOH HOH . E 3 HOH A 63 663 663 HOH HOH . E 3 HOH A 64 664 664 HOH HOH . E 3 HOH A 65 665 665 HOH HOH . E 3 HOH A 66 666 666 HOH HOH . E 3 HOH A 67 667 667 HOH HOH . E 3 HOH A 68 668 668 HOH HOH . E 3 HOH A 69 669 669 HOH HOH . E 3 HOH A 70 670 670 HOH HOH . E 3 HOH A 71 671 671 HOH HOH . F 3 HOH B 1 601 601 HOH HOH . F 3 HOH B 2 602 602 HOH HOH . F 3 HOH B 3 603 603 HOH HOH . F 3 HOH B 4 604 604 HOH HOH . F 3 HOH B 5 605 605 HOH HOH . F 3 HOH B 6 606 606 HOH HOH . F 3 HOH B 7 607 607 HOH HOH . F 3 HOH B 8 608 608 HOH HOH . F 3 HOH B 9 609 609 HOH HOH . F 3 HOH B 10 610 610 HOH HOH . F 3 HOH B 11 611 611 HOH HOH . F 3 HOH B 12 612 612 HOH HOH . F 3 HOH B 13 613 613 HOH HOH . F 3 HOH B 14 614 614 HOH HOH . F 3 HOH B 15 615 615 HOH HOH . F 3 HOH B 16 616 616 HOH HOH . F 3 HOH B 17 617 617 HOH HOH . F 3 HOH B 18 618 618 HOH HOH . F 3 HOH B 19 619 619 HOH HOH . F 3 HOH B 20 620 620 HOH HOH . F 3 HOH B 21 621 621 HOH HOH . F 3 HOH B 22 622 622 HOH HOH . F 3 HOH B 23 623 623 HOH HOH . F 3 HOH B 24 624 624 HOH HOH . F 3 HOH B 25 625 625 HOH HOH . F 3 HOH B 26 626 626 HOH HOH . F 3 HOH B 27 627 627 HOH HOH . F 3 HOH B 28 628 628 HOH HOH . F 3 HOH B 29 629 629 HOH HOH . F 3 HOH B 30 630 630 HOH HOH . F 3 HOH B 31 631 631 HOH HOH . F 3 HOH B 32 632 632 HOH HOH . F 3 HOH B 33 633 633 HOH HOH . F 3 HOH B 34 634 634 HOH HOH . F 3 HOH B 35 635 635 HOH HOH . F 3 HOH B 36 636 636 HOH HOH . F 3 HOH B 37 637 637 HOH HOH . F 3 HOH B 38 638 638 HOH HOH . F 3 HOH B 39 639 639 HOH HOH . F 3 HOH B 40 640 640 HOH HOH . F 3 HOH B 41 641 641 HOH HOH . F 3 HOH B 42 642 642 HOH HOH . F 3 HOH B 43 643 643 HOH HOH . F 3 HOH B 44 644 644 HOH HOH . F 3 HOH B 45 645 645 HOH HOH . F 3 HOH B 46 646 646 HOH HOH . F 3 HOH B 47 647 647 HOH HOH . F 3 HOH B 48 648 648 HOH HOH . F 3 HOH B 49 649 649 HOH HOH . F 3 HOH B 50 650 650 HOH HOH . F 3 HOH B 51 651 651 HOH HOH . F 3 HOH B 52 652 652 HOH HOH . F 3 HOH B 53 653 653 HOH HOH . F 3 HOH B 54 654 654 HOH HOH . F 3 HOH B 55 655 655 HOH HOH . F 3 HOH B 56 656 656 HOH HOH . F 3 HOH B 57 657 657 HOH HOH . F 3 HOH B 58 658 658 HOH HOH . F 3 HOH B 59 659 659 HOH HOH . F 3 HOH B 60 660 660 HOH HOH . F 3 HOH B 61 661 661 HOH HOH . F 3 HOH B 62 662 662 HOH HOH . F 3 HOH B 63 663 663 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA BLA . . . D 2 23.297 -38.451 -30.901 1 33.72 ? CHA BLA 501 B 1 HETATM 2 N NA BLA . . . D 2 22.315 -38.239 -28.662 1 29.98 ? NA BLA 501 B 1 HETATM 3 C C1A BLA . . . D 2 22.733 -38.965 -29.749 1 31.89 ? C1A BLA 501 B 1 HETATM 4 C C2A BLA . . . D 2 22.477 -40.308 -29.473 1 31.66 ? C2A BLA 501 B 1 HETATM 5 C C3A BLA . . . D 2 21.917 -40.386 -28.226 1 30.41 ? C3A BLA 501 B 1 HETATM 6 C C4A BLA . . . D 2 21.811 -39.068 -27.696 1 31.27 ? C4A BLA 501 B 1 HETATM 7 C CMA BLA . . . D 2 21.478 -41.618 -27.512 1 30.79 ? CMA BLA 501 B 1 HETATM 8 C CAA BLA . . . D 2 22.792 -41.438 -30.403 1 32.42 ? CAA BLA 501 B 1 HETATM 9 C CBA BLA . . . D 2 21.593 -42.027 -31.122 1 34.98 ? CBA BLA 501 B 1 HETATM 10 C CGA BLA . . . D 2 21.89 -43.314 -31.867 1 40.85 ? CGA BLA 501 B 1 HETATM 11 O O1A BLA . . . D 2 20.97 -43.89 -32.392 1 38.69 ? O1A BLA 501 B 1 HETATM 12 O O2A BLA . . . D 2 23.036 -43.705 -31.93 1 37.96 ? O2A BLA 501 B 1 HETATM 13 C CHB BLA . . . D 2 21.307 -38.691 -26.472 1 28.03 ? CHB BLA 501 B 1 HETATM 14 N NB BLA . . . D 2 22.592 -36.764 -25.836 1 29.21 ? NB BLA 501 B 1 HETATM 15 C C1B BLA . . . D 2 21.699 -37.747 -25.597 1 28.56 ? C1B BLA 501 B 1 HETATM 16 C C2B BLA . . . D 2 21.225 -37.594 -24.284 1 29.12 ? C2B BLA 501 B 1 HETATM 17 C C3B BLA . . . D 2 22.023 -36.635 -23.636 1 27.91 ? C3B BLA 501 B 1 HETATM 18 C C4B BLA . . . D 2 22.942 -36.148 -24.675 1 30.25 ? C4B BLA 501 B 1 HETATM 19 C CMB BLA . . . D 2 20.066 -38.306 -23.661 1 28.77 ? CMB BLA 501 B 1 HETATM 20 O OB BLA . . . D 2 23.842 -35.351 -24.576 1 28.98 ? OB BLA 501 B 1 HETATM 21 C CAB BLA . . . D 2 21.938 -36.247 -22.296 1 25.81 ? CAB BLA 501 B 1 HETATM 22 C CBB BLA . . . D 2 22.674 -35.425 -21.63 1 30.04 ? CBB BLA 501 B 1 HETATM 23 N NC BLA . . . D 2 20.374 -34.588 -29.917 1 31.71 ? NC BLA 501 B 1 HETATM 24 C C1C BLA . . . D 2 19.122 -34.124 -29.622 1 31.81 ? C1C BLA 501 B 1 HETATM 25 C C2C BLA . . . D 2 19.098 -32.727 -29.959 1 30.43 ? C2C BLA 501 B 1 HETATM 26 C C3C BLA . . . D 2 20.35 -32.428 -30.474 1 30.24 ? C3C BLA 501 B 1 HETATM 27 C C4C BLA . . . D 2 21.065 -33.627 -30.624 1 30.56 ? C4C BLA 501 B 1 HETATM 28 C CMC BLA . . . D 2 17.964 -31.764 -29.831 1 30.76 ? CMC BLA 501 B 1 HETATM 29 O OC BLA . . . D 2 18.241 -34.795 -29.169 1 32.74 ? OC BLA 501 B 1 HETATM 30 C CAC BLA . . . D 2 20.733 -31.14 -30.786 1 29.74 ? CAC BLA 501 B 1 HETATM 31 C CBC BLA . . . D 2 21.893 -30.59 -30.795 1 31.12 ? CBC BLA 501 B 1 HETATM 32 C CHD BLA . . . D 2 22.204 -33.849 -31.31 1 29.78 ? CHD BLA 501 B 1 HETATM 33 N ND BLA . . . D 2 22.601 -36.148 -30.762 1 31.65 ? ND BLA 501 B 1 HETATM 34 C C1D BLA . . . D 2 22.831 -35.034 -31.495 1 33.1 ? C1D BLA 501 B 1 HETATM 35 C C2D BLA . . . D 2 23.849 -35.305 -32.493 1 32.27 ? C2D BLA 501 B 1 HETATM 36 C C3D BLA . . . D 2 24.122 -36.629 -32.425 1 34.52 ? C3D BLA 501 B 1 HETATM 37 C C4D BLA . . . D 2 23.314 -37.148 -31.338 1 34.94 ? C4D BLA 501 B 1 HETATM 38 C CMD BLA . . . D 2 24.484 -34.298 -33.397 1 33.32 ? CMD BLA 501 B 1 HETATM 39 C CAD BLA . . . D 2 25.1 -37.422 -33.234 1 39.28 ? CAD BLA 501 B 1 HETATM 40 C CBD BLA . . . D 2 26.439 -37.611 -32.528 1 42.66 ? CBD BLA 501 B 1 HETATM 41 C CGD BLA . . . D 2 27.459 -38.404 -33.318 1 40.69 ? CGD BLA 501 B 1 HETATM 42 O O1D BLA . . . D 2 27.061 -39.325 -33.995 1 39.17 ? O1D BLA 501 B 1 HETATM 43 O O2D BLA . . . D 2 28.631 -38.078 -33.242 1 37.71 ? O2D BLA 501 B 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 43 #