data_7RE5 # _model_server_result.job_id dWpecqAKpjR6Wa98qwy6Ow _model_server_result.datetime_utc '2024-10-19 14:35:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7re5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":201}' # _entry.id 7RE5 # _exptl.entry_id 7RE5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RE5 _cell.length_a 78.754 _cell.length_b 78.754 _cell.length_c 214.803 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 3 A HIS 27 1_555 G ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc2 A NE2 HIS 3 A HIS 27 1_555 G ZN ZN . A ZN 202 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 A SG CYS 5 A CYS 29 1_555 G ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc4 A SG CYS 5 A CYS 29 1_555 G ZN ZN . A ZN 202 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc5 A ND1 HIS 81 A HIS 105 1_555 F ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc6 A SG CYS 87 A CYS 111 1_555 M ZN ZN . E ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc7 A SG CYS 108 A CYS 132 1_555 F ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc8 F ZN ZN . A ZN 201 1_555 B SG CYS 87 B CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc9 B NE2 HIS 3 B HIS 27 1_555 I ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc10 B SG CYS 5 B CYS 29 1_555 I ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc11 B ND1 HIS 81 B HIS 105 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc12 B SG CYS 108 B CYS 132 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc13 B SG CYS 109 B CYS 133 1_555 H ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc14 H ZN ZN . B ZN 201 1_555 C SG CYS 87 C CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc15 I ZN ZN . B ZN 202 7_555 E NE2 HIS 3 E HIS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc16 I ZN ZN . B ZN 202 7_555 E SG CYS 5 E CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc17 C NE2 HIS 3 C HIS 27 1_555 K ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc18 C SG CYS 5 C CYS 29 1_555 K ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc19 C ND1 HIS 81 C HIS 105 1_555 J ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc20 C SG CYS 108 C CYS 132 1_555 J ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc21 J ZN ZN . C ZN 201 1_555 D SG CYS 87 D CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc22 K ZN ZN . C ZN 202 7_555 D NE2 HIS 3 D HIS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc23 K ZN ZN . C ZN 202 7_555 D SG CYS 5 D CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc24 D ND1 HIS 81 D HIS 105 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc25 D SG CYS 108 D CYS 132 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc26 D SG CYS 109 D CYS 133 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc27 L ZN ZN . D ZN 201 1_555 E SG CYS 87 E CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc28 E SG CYS 108 E CYS 132 1_555 M ZN ZN . E ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc29 E SG CYS 109 E CYS 133 1_555 M ZN ZN . E ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7RE5 _atom_sites.fract_transf_matrix[1][1] 0.012698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 ZN A 1 201 1 ZN ZN . G 2 ZN A 1 202 6 ZN ZN . H 2 ZN B 1 201 2 ZN ZN . I 2 ZN B 1 202 7 ZN ZN . J 2 ZN C 1 201 3 ZN ZN . K 2 ZN C 1 202 8 ZN ZN . L 2 ZN D 1 201 4 ZN ZN . M 2 ZN E 1 201 5 ZN ZN . N 3 HOH A 1 301 74 HOH HOH . N 3 HOH A 2 302 77 HOH HOH . N 3 HOH A 3 303 1 HOH HOH . N 3 HOH A 4 304 2 HOH HOH . N 3 HOH A 5 305 3 HOH HOH . N 3 HOH A 6 306 87 HOH HOH . N 3 HOH A 7 307 86 HOH HOH . N 3 HOH A 8 308 76 HOH HOH . N 3 HOH A 9 309 49 HOH HOH . O 3 HOH B 1 301 71 HOH HOH . O 3 HOH B 2 302 47 HOH HOH . O 3 HOH B 3 303 6 HOH HOH . O 3 HOH B 4 304 22 HOH HOH . P 3 HOH C 1 301 27 HOH HOH . P 3 HOH C 2 302 23 HOH HOH . Q 3 HOH D 1 301 63 HOH HOH . Q 3 HOH D 2 302 8 HOH HOH . Q 3 HOH D 3 303 78 HOH HOH . Q 3 HOH D 4 304 85 HOH HOH . Q 3 HOH D 5 305 26 HOH HOH . Q 3 HOH D 6 306 84 HOH HOH . Q 3 HOH D 7 307 53 HOH HOH . R 3 HOH E 1 301 88 HOH HOH . R 3 HOH E 2 302 40 HOH HOH . R 3 HOH E 3 303 21 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.217 _atom_site.Cartn_y 31.824 _atom_site.Cartn_z 24.288 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 81.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #