data_7RE8 # _model_server_result.job_id PfYcJRvbGFRHJHOq0Dkudw _model_server_result.datetime_utc '2025-04-06 06:50:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7re8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":201}' # _entry.id 7RE8 # _exptl.entry_id 7RE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RE8 _cell.length_a 63.207 _cell.length_b 87.31 _cell.length_c 78.724 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,N,O,Y,Z 1 1 D,E,F,P,Q,R,S,T,U,V,W,X,AA,BA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 Q N N ? 5 R N N ? 5 T N N ? 5 V N N ? 5 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 102 A CYS 102 1_555 A SG CYS 165 A CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 204 A CYS 204 1_555 A SG CYS 260 A CYS 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 B SG CYS 26 B CYS 26 1_555 B SG CYS 81 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 E SG CYS 102 D CYS 102 1_555 E SG CYS 165 D CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 E SG CYS 204 D CYS 204 1_555 E SG CYS 260 D CYS 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 F SG CYS 26 E CYS 26 1_555 F SG CYS 81 E CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 274 n n C1 C2 PEG sing 275 n n C1 H11 PEG sing 276 n n C1 H12 PEG sing 277 n n O1 HO1 PEG sing 278 n n C2 O2 PEG sing 279 n n C2 H21 PEG sing 280 n n C2 H22 PEG sing 281 n n O2 C3 PEG sing 282 n n C3 C4 PEG sing 283 n n C3 H31 PEG sing 284 n n C3 H32 PEG sing 285 n n C4 O4 PEG sing 286 n n C4 H41 PEG sing 287 n n C4 H42 PEG sing 288 n n O4 HO4 PEG sing 289 n n # _atom_sites.entry_id 7RE8 _atom_sites.fract_transf_matrix[1][1] 0.015821 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011453 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012703 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 PGE A 1 301 301 PGE PGE . H 5 PEG A 1 302 302 PEG PEG . I 6 1PE A 1 303 303 1PE 1PE . J 5 PEG A 1 304 304 PEG PEG . K 5 PEG A 1 305 306 PEG PEG . L 5 PEG A 1 306 303 PEG PEG . M 5 PEG B 1 201 203 PEG PEG . N 4 PGE B 1 202 204 PGE PGE . O 4 PGE C 1 101 305 PGE PGE . P 4 PGE D 1 301 301 PGE PGE . Q 5 PEG D 1 302 302 PEG PEG . R 5 PEG D 1 303 304 PEG PEG . S 4 PGE D 1 304 305 PGE PGE . T 5 PEG D 1 305 306 PEG PEG . U 6 1PE D 1 306 202 1PE 1PE . V 5 PEG E 1 201 201 PEG PEG . W 5 PEG E 1 202 203 PEG PEG . X 4 PGE E 1 203 204 PGE PGE . Y 7 HOH A 1 401 19 HOH HOH . Y 7 HOH A 2 402 48 HOH HOH . Y 7 HOH A 3 403 14 HOH HOH . Y 7 HOH A 4 404 42 HOH HOH . Y 7 HOH A 5 405 43 HOH HOH . Y 7 HOH A 6 406 1 HOH HOH . Y 7 HOH A 7 407 81 HOH HOH . Y 7 HOH A 8 408 56 HOH HOH . Y 7 HOH A 9 409 59 HOH HOH . Y 7 HOH A 10 410 5 HOH HOH . Y 7 HOH A 11 411 37 HOH HOH . Y 7 HOH A 12 412 39 HOH HOH . Y 7 HOH A 13 413 8 HOH HOH . Y 7 HOH A 14 414 79 HOH HOH . Y 7 HOH A 15 415 49 HOH HOH . Y 7 HOH A 16 416 50 HOH HOH . Y 7 HOH A 17 417 3 HOH HOH . Y 7 HOH A 18 418 78 HOH HOH . Y 7 HOH A 19 419 68 HOH HOH . Z 7 HOH B 1 301 2 HOH HOH . Z 7 HOH B 2 302 58 HOH HOH . Z 7 HOH B 3 303 69 HOH HOH . Z 7 HOH B 4 304 70 HOH HOH . Z 7 HOH B 5 305 67 HOH HOH . Z 7 HOH B 6 306 7 HOH HOH . Z 7 HOH B 7 307 30 HOH HOH . Z 7 HOH B 8 308 44 HOH HOH . Z 7 HOH B 9 309 66 HOH HOH . Z 7 HOH B 10 310 76 HOH HOH . Z 7 HOH B 11 311 33 HOH HOH . AA 7 HOH D 1 401 57 HOH HOH . AA 7 HOH D 2 402 54 HOH HOH . AA 7 HOH D 3 403 77 HOH HOH . AA 7 HOH D 4 404 71 HOH HOH . AA 7 HOH D 5 405 82 HOH HOH . AA 7 HOH D 6 406 32 HOH HOH . AA 7 HOH D 7 407 16 HOH HOH . AA 7 HOH D 8 408 41 HOH HOH . AA 7 HOH D 9 409 73 HOH HOH . AA 7 HOH D 10 410 83 HOH HOH . AA 7 HOH D 11 411 13 HOH HOH . AA 7 HOH D 12 412 20 HOH HOH . AA 7 HOH D 13 413 11 HOH HOH . AA 7 HOH D 14 414 62 HOH HOH . AA 7 HOH D 15 415 18 HOH HOH . AA 7 HOH D 16 416 55 HOH HOH . AA 7 HOH D 17 417 65 HOH HOH . AA 7 HOH D 18 418 10 HOH HOH . AA 7 HOH D 19 419 45 HOH HOH . AA 7 HOH D 20 420 22 HOH HOH . BA 7 HOH E 1 301 51 HOH HOH . BA 7 HOH E 2 302 17 HOH HOH . BA 7 HOH E 3 303 29 HOH HOH . BA 7 HOH E 4 304 80 HOH HOH . BA 7 HOH E 5 305 4 HOH HOH . BA 7 HOH E 6 306 31 HOH HOH . BA 7 HOH E 7 307 60 HOH HOH . BA 7 HOH E 8 308 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . V 5 24.026 -53.018 1.233 1 29.22 ? C1 PEG 201 E 1 HETATM 2 O O1 PEG . . . V 5 25.05 -52.08 1.422 1 28.59 ? O1 PEG 201 E 1 HETATM 3 C C2 PEG . . . V 5 23.731 -53.154 -0.257 1 33.3 ? C2 PEG 201 E 1 HETATM 4 O O2 PEG . . . V 5 22.744 -54.126 -0.453 1 42.26 ? O2 PEG 201 E 1 HETATM 5 C C3 PEG . . . V 5 22.617 -54.55 -1.784 1 45.82 ? C3 PEG 201 E 1 HETATM 6 C C4 PEG . . . V 5 23.945 -55.12 -2.281 1 48.42 ? C4 PEG 201 E 1 HETATM 7 O O4 PEG . . . V 5 23.738 -55.883 -3.438 1 48.69 ? O4 PEG 201 E 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #