data_7REC # _model_server_result.job_id vPxSU47qHJ-U-lN9nB9lEg _model_server_result.datetime_utc '2025-01-10 16:09:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rec # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":502}' # _entry.id 7REC # _exptl.entry_id 7REC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7REC _cell.length_a 101.433 _cell.length_b 182.958 _cell.length_c 106.466 _cell.Z_PDB 56 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7REC _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetradecameric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 53.233 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OG1 THR 106 D THR 446 1_555 L NA NA . C NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc2 E OH TYR 58 C TYR 398 1_555 L NA NA . C NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7REC _atom_sites.fract_transf_matrix[1][1] 0.009859 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009393 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 7ZV G 1 500 500 7ZV LIG . I 2 7ZV D 1 500 500 7ZV LIG . J 2 7ZV B 1 500 500 7ZV LIG . K 2 7ZV C 1 501 500 7ZV LIG . L 3 NA C 1 502 1 NA NA . M 2 7ZV E 1 500 500 7ZV LIG . N 2 7ZV F 1 500 500 7ZV LIG . O 4 HOH G 1 601 88 HOH HOH . O 4 HOH G 2 602 93 HOH HOH . O 4 HOH G 3 603 76 HOH HOH . O 4 HOH G 4 604 1 HOH HOH . O 4 HOH G 5 605 71 HOH HOH . O 4 HOH G 6 606 19 HOH HOH . O 4 HOH G 7 607 28 HOH HOH . O 4 HOH G 8 608 27 HOH HOH . O 4 HOH G 9 609 31 HOH HOH . O 4 HOH G 10 610 96 HOH HOH . O 4 HOH G 11 611 24 HOH HOH . O 4 HOH G 12 612 16 HOH HOH . O 4 HOH G 13 613 44 HOH HOH . O 4 HOH G 14 614 113 HOH HOH . O 4 HOH G 15 615 112 HOH HOH . O 4 HOH G 16 616 29 HOH HOH . P 4 HOH D 1 601 108 HOH HOH . P 4 HOH D 2 602 73 HOH HOH . P 4 HOH D 3 603 86 HOH HOH . P 4 HOH D 4 604 2 HOH HOH . P 4 HOH D 5 605 114 HOH HOH . P 4 HOH D 6 606 69 HOH HOH . P 4 HOH D 7 607 77 HOH HOH . P 4 HOH D 8 608 7 HOH HOH . P 4 HOH D 9 609 26 HOH HOH . P 4 HOH D 10 610 91 HOH HOH . P 4 HOH D 11 611 98 HOH HOH . P 4 HOH D 12 612 21 HOH HOH . P 4 HOH D 13 613 68 HOH HOH . P 4 HOH D 14 614 30 HOH HOH . P 4 HOH D 15 615 54 HOH HOH . P 4 HOH D 16 616 47 HOH HOH . Q 4 HOH A 1 501 89 HOH HOH . Q 4 HOH A 2 502 4 HOH HOH . Q 4 HOH A 3 503 57 HOH HOH . Q 4 HOH A 4 504 74 HOH HOH . Q 4 HOH A 5 505 14 HOH HOH . Q 4 HOH A 6 506 95 HOH HOH . Q 4 HOH A 7 507 58 HOH HOH . Q 4 HOH A 8 508 55 HOH HOH . Q 4 HOH A 9 509 34 HOH HOH . Q 4 HOH A 10 510 75 HOH HOH . Q 4 HOH A 11 511 110 HOH HOH . Q 4 HOH A 12 512 59 HOH HOH . Q 4 HOH A 13 513 109 HOH HOH . R 4 HOH B 1 601 115 HOH HOH . R 4 HOH B 2 602 87 HOH HOH . R 4 HOH B 3 603 107 HOH HOH . R 4 HOH B 4 604 78 HOH HOH . R 4 HOH B 5 605 22 HOH HOH . R 4 HOH B 6 606 33 HOH HOH . R 4 HOH B 7 607 37 HOH HOH . R 4 HOH B 8 608 32 HOH HOH . R 4 HOH B 9 609 38 HOH HOH . R 4 HOH B 10 610 3 HOH HOH . R 4 HOH B 11 611 116 HOH HOH . R 4 HOH B 12 612 9 HOH HOH . R 4 HOH B 13 613 111 HOH HOH . R 4 HOH B 14 614 12 HOH HOH . S 4 HOH C 1 601 25 HOH HOH . S 4 HOH C 2 602 11 HOH HOH . S 4 HOH C 3 603 61 HOH HOH . S 4 HOH C 4 604 13 HOH HOH . S 4 HOH C 5 605 6 HOH HOH . S 4 HOH C 6 606 64 HOH HOH . S 4 HOH C 7 607 10 HOH HOH . S 4 HOH C 8 608 45 HOH HOH . S 4 HOH C 9 609 62 HOH HOH . S 4 HOH C 10 610 46 HOH HOH . S 4 HOH C 11 611 51 HOH HOH . S 4 HOH C 12 612 60 HOH HOH . S 4 HOH C 13 613 40 HOH HOH . S 4 HOH C 14 614 50 HOH HOH . T 4 HOH E 1 601 18 HOH HOH . T 4 HOH E 2 602 49 HOH HOH . T 4 HOH E 3 603 106 HOH HOH . T 4 HOH E 4 604 41 HOH HOH . T 4 HOH E 5 605 90 HOH HOH . T 4 HOH E 6 606 102 HOH HOH . T 4 HOH E 7 607 103 HOH HOH . U 4 HOH F 1 601 5 HOH HOH . U 4 HOH F 2 602 42 HOH HOH . U 4 HOH F 3 603 8 HOH HOH . U 4 HOH F 4 604 23 HOH HOH . U 4 HOH F 5 605 105 HOH HOH . U 4 HOH F 6 606 104 HOH HOH . U 4 HOH F 7 607 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.032 _atom_site.Cartn_y 14.221 _atom_site.Cartn_z 35.213 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 79.18 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #