data_7RES # _model_server_result.job_id u0gY10gULrppn8mGF8qzgw _model_server_result.datetime_utc '2024-12-26 17:17:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7res # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":603}' # _entry.id 7RES # _exptl.entry_id 7RES _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 348.206 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSINIC ACID' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RES _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RES _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 K N N ? 3 O N N ? 3 S N N ? 3 W N N ? 3 AA N N ? 3 EA N N ? 3 IA N N ? 3 MA N N # _chem_comp.formula 'C10 H13 N4 O8 P' _chem_comp.formula_weight 348.206 _chem_comp.id IMP _chem_comp.mon_nstd_flag n _chem_comp.name 'INOSINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P IMP doub 220 n n P O2P IMP sing 221 n n P O3P IMP sing 222 n n P O5' IMP sing 223 n n O2P HOP2 IMP sing 224 n n O3P HOP3 IMP sing 225 n n O5' C5' IMP sing 226 n n C5' C4' IMP sing 227 n n C5' "H5'1" IMP sing 228 n n C5' "H5'2" IMP sing 229 n n C4' O4' IMP sing 230 n n C4' C3' IMP sing 231 n n C4' H4' IMP sing 232 n n O4' C1' IMP sing 233 n n C3' O3' IMP sing 234 n n C3' C2' IMP sing 235 n n C3' H3' IMP sing 236 n n O3' HO3' IMP sing 237 n n C2' O2' IMP sing 238 n n C2' C1' IMP sing 239 n n C2' H2' IMP sing 240 n n O2' HO2' IMP sing 241 n n C1' N9 IMP sing 242 n n C1' H1' IMP sing 243 n n N9 C8 IMP sing 244 n y N9 C4 IMP sing 245 n y C8 N7 IMP doub 246 n y C8 H8 IMP sing 247 n n N7 C5 IMP sing 248 n y C5 C6 IMP sing 249 n n C5 C4 IMP doub 250 n y C6 O6 IMP doub 251 n n C6 N1 IMP sing 252 n n N1 C2 IMP sing 253 n n N1 HN1 IMP sing 254 n n C2 N3 IMP doub 255 n n C2 H2 IMP sing 256 n n N3 C4 IMP sing 257 n n # _atom_sites.entry_id 7RES _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ATP A 1 601 601 ATP ATP . J 2 ATP A 1 602 602 ATP ATP . K 3 IMP A 1 603 603 IMP IMP . L 4 NAD A 1 604 604 NAD NAD . M 2 ATP B 1 601 601 ATP ATP . N 2 ATP B 1 602 602 ATP ATP . O 3 IMP B 1 603 603 IMP IMP . P 4 NAD B 1 604 604 NAD NAD . Q 2 ATP C 1 601 601 ATP ATP . R 2 ATP C 1 602 602 ATP ATP . S 3 IMP C 1 603 603 IMP IMP . T 4 NAD C 1 604 604 NAD NAD . U 2 ATP D 1 601 601 ATP ATP . V 2 ATP D 1 602 602 ATP ATP . W 3 IMP D 1 603 603 IMP IMP . X 4 NAD D 1 604 604 NAD NAD . Y 2 ATP E 1 601 601 ATP ATP . Z 2 ATP E 1 602 602 ATP ATP . AA 3 IMP E 1 603 603 IMP IMP . BA 4 NAD E 1 604 604 NAD NAD . CA 2 ATP F 1 601 601 ATP ATP . DA 2 ATP F 1 602 602 ATP ATP . EA 3 IMP F 1 603 603 IMP IMP . FA 4 NAD F 1 604 604 NAD NAD . GA 2 ATP G 1 601 601 ATP ATP . HA 2 ATP G 1 602 602 ATP ATP . IA 3 IMP G 1 603 603 IMP IMP . JA 4 NAD G 1 604 604 NAD NAD . KA 2 ATP H 1 601 601 ATP ATP . LA 2 ATP H 1 602 602 ATP ATP . MA 3 IMP H 1 603 603 IMP IMP . NA 4 NAD H 1 604 604 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P IMP . . . W 3 176.363 146.874 195.688 1 41.91 ? P IMP 603 D 1 HETATM 2 O O1P IMP . . . W 3 175.423 146.861 194.53 1 41.91 ? O1P IMP 603 D 1 HETATM 3 O O2P IMP . . . W 3 175.882 147.913 196.64 1 41.91 ? O2P IMP 603 D 1 HETATM 4 O O3P IMP . . . W 3 177.771 147.002 195.208 1 41.91 ? O3P IMP 603 D 1 HETATM 5 O O5' IMP . . . W 3 176.255 145.475 196.424 1 41.91 ? O5' IMP 603 D 1 HETATM 6 C C5' IMP . . . W 3 175.262 144.537 196.056 1 41.91 ? C5' IMP 603 D 1 HETATM 7 C C4' IMP . . . W 3 174.64 143.871 197.254 1 41.91 ? C4' IMP 603 D 1 HETATM 8 O O4' IMP . . . W 3 173.209 143.931 197.129 1 41.91 ? O4' IMP 603 D 1 HETATM 9 C C3' IMP . . . W 3 174.938 142.398 197.412 1 41.91 ? C3' IMP 603 D 1 HETATM 10 O O3' IMP . . . W 3 176.15 142.172 198.098 1 41.91 ? O3' IMP 603 D 1 HETATM 11 C C2' IMP . . . W 3 173.727 141.864 198.162 1 41.91 ? C2' IMP 603 D 1 HETATM 12 O O2' IMP . . . W 3 173.89 142.024 199.554 1 41.91 ? O2' IMP 603 D 1 HETATM 13 C C1' IMP . . . W 3 172.619 142.801 197.709 1 41.91 ? C1' IMP 603 D 1 HETATM 14 N N9 IMP . . . W 3 171.753 142.196 196.699 1 41.91 ? N9 IMP 603 D 1 HETATM 15 C C8 IMP . . . W 3 172.136 141.258 195.841 1 41.91 ? C8 IMP 603 D 1 HETATM 16 N N7 IMP . . . W 3 171.075 140.99 195.075 1 41.91 ? N7 IMP 603 D 1 HETATM 17 C C5 IMP . . . W 3 170.08 141.762 195.46 1 41.91 ? C5 IMP 603 D 1 HETATM 18 C C6 IMP . . . W 3 168.652 141.907 194.972 1 41.91 ? C6 IMP 603 D 1 HETATM 19 O O6 IMP . . . W 3 168.276 141.244 194.088 1 41.91 ? O6 IMP 603 D 1 HETATM 20 N N1 IMP . . . W 3 167.763 142.823 195.568 1 41.91 ? N1 IMP 603 D 1 HETATM 21 C C2 IMP . . . W 3 168.235 143.611 196.653 1 41.91 ? C2 IMP 603 D 1 HETATM 22 N N3 IMP . . . W 3 169.6 143.493 197.124 1 41.91 ? N3 IMP 603 D 1 HETATM 23 C C4 IMP . . . W 3 170.509 142.525 196.476 1 41.91 ? C4 IMP 603 D 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #