data_7RES # _model_server_result.job_id -Dy_QIg6AsGMJwcyjZeW5Q _model_server_result.datetime_utc '2024-11-14 17:27:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7res # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":604}' # _entry.id 7RES # _exptl.entry_id 7RES _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 663.425 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RES _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RES _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 L N N ? 4 P N N ? 4 T N N ? 4 X N N ? 4 BA N N ? 4 FA N N ? 4 JA N N ? 4 NA N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 322 n n PA O2A NAD sing 323 n n PA O5B NAD sing 324 n n PA O3 NAD sing 325 n n O2A HOA2 NAD sing 326 n n O5B C5B NAD sing 327 n n C5B C4B NAD sing 328 n n C5B H51A NAD sing 329 n n C5B H52A NAD sing 330 n n C4B O4B NAD sing 331 n n C4B C3B NAD sing 332 n n C4B H4B NAD sing 333 n n O4B C1B NAD sing 334 n n C3B O3B NAD sing 335 n n C3B C2B NAD sing 336 n n C3B H3B NAD sing 337 n n O3B HO3A NAD sing 338 n n C2B O2B NAD sing 339 n n C2B C1B NAD sing 340 n n C2B H2B NAD sing 341 n n O2B HO2A NAD sing 342 n n C1B N9A NAD sing 343 n n C1B H1B NAD sing 344 n n N9A C8A NAD sing 345 n y N9A C4A NAD sing 346 n y C8A N7A NAD doub 347 n y C8A H8A NAD sing 348 n n N7A C5A NAD sing 349 n y C5A C6A NAD sing 350 n y C5A C4A NAD doub 351 n y C6A N6A NAD sing 352 n n C6A N1A NAD doub 353 n y N6A H61A NAD sing 354 n n N6A H62A NAD sing 355 n n N1A C2A NAD sing 356 n y C2A N3A NAD doub 357 n y C2A H2A NAD sing 358 n n N3A C4A NAD sing 359 n y O3 PN NAD sing 360 n n PN O1N NAD doub 361 n n PN O2N NAD sing 362 n n PN O5D NAD sing 363 n n O5D C5D NAD sing 364 n n C5D C4D NAD sing 365 n n C5D H51N NAD sing 366 n n C5D H52N NAD sing 367 n n C4D O4D NAD sing 368 n n C4D C3D NAD sing 369 n n C4D H4D NAD sing 370 n n O4D C1D NAD sing 371 n n C3D O3D NAD sing 372 n n C3D C2D NAD sing 373 n n C3D H3D NAD sing 374 n n O3D HO3N NAD sing 375 n n C2D O2D NAD sing 376 n n C2D C1D NAD sing 377 n n C2D H2D NAD sing 378 n n O2D HO2N NAD sing 379 n n C1D N1N NAD sing 380 n n C1D H1D NAD sing 381 n n N1N C2N NAD sing 382 n y N1N C6N NAD doub 383 n y C2N C3N NAD doub 384 n y C2N H2N NAD sing 385 n n C3N C7N NAD sing 386 n n C3N C4N NAD sing 387 n y C7N O7N NAD doub 388 n n C7N N7N NAD sing 389 n n N7N H71N NAD sing 390 n n N7N H72N NAD sing 391 n n C4N C5N NAD doub 392 n y C4N H4N NAD sing 393 n n C5N C6N NAD sing 394 n y C5N H5N NAD sing 395 n n C6N H6N NAD sing 396 n n # _atom_sites.entry_id 7RES _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ATP A 1 601 601 ATP ATP . J 2 ATP A 1 602 602 ATP ATP . K 3 IMP A 1 603 603 IMP IMP . L 4 NAD A 1 604 604 NAD NAD . M 2 ATP B 1 601 601 ATP ATP . N 2 ATP B 1 602 602 ATP ATP . O 3 IMP B 1 603 603 IMP IMP . P 4 NAD B 1 604 604 NAD NAD . Q 2 ATP C 1 601 601 ATP ATP . R 2 ATP C 1 602 602 ATP ATP . S 3 IMP C 1 603 603 IMP IMP . T 4 NAD C 1 604 604 NAD NAD . U 2 ATP D 1 601 601 ATP ATP . V 2 ATP D 1 602 602 ATP ATP . W 3 IMP D 1 603 603 IMP IMP . X 4 NAD D 1 604 604 NAD NAD . Y 2 ATP E 1 601 601 ATP ATP . Z 2 ATP E 1 602 602 ATP ATP . AA 3 IMP E 1 603 603 IMP IMP . BA 4 NAD E 1 604 604 NAD NAD . CA 2 ATP F 1 601 601 ATP ATP . DA 2 ATP F 1 602 602 ATP ATP . EA 3 IMP F 1 603 603 IMP IMP . FA 4 NAD F 1 604 604 NAD NAD . GA 2 ATP G 1 601 601 ATP ATP . HA 2 ATP G 1 602 602 ATP ATP . IA 3 IMP G 1 603 603 IMP IMP . JA 4 NAD G 1 604 604 NAD NAD . KA 2 ATP H 1 601 601 ATP ATP . LA 2 ATP H 1 602 602 ATP ATP . MA 3 IMP H 1 603 603 IMP IMP . NA 4 NAD H 1 604 604 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . X 4 164.968 134.531 200.426 1 54.76 ? PA NAD 604 D 1 HETATM 2 O O1A NAD . . . X 4 164.925 135.031 201.844 1 54.76 ? O1A NAD 604 D 1 HETATM 3 O O2A NAD . . . X 4 165.606 133.17 200.382 1 54.76 ? O2A NAD 604 D 1 HETATM 4 O O5B NAD . . . X 4 163.446 134.432 199.817 1 54.76 ? O5B NAD 604 D 1 HETATM 5 C C5B NAD . . . X 4 162.782 133.219 199.925 1 54.76 ? C5B NAD 604 D 1 HETATM 6 C C4B NAD . . . X 4 161.396 133.489 200.471 1 54.76 ? C4B NAD 604 D 1 HETATM 7 O O4B NAD . . . X 4 160.811 132.142 201.138 1 54.76 ? O4B NAD 604 D 1 HETATM 8 C C3B NAD . . . X 4 161.452 134.355 201.428 1 54.76 ? C3B NAD 604 D 1 HETATM 9 O O3B NAD . . . X 4 160.094 134.916 201.659 1 54.76 ? O3B NAD 604 D 1 HETATM 10 C C2B NAD . . . X 4 161.847 133.506 202.635 1 54.76 ? C2B NAD 604 D 1 HETATM 11 O O2B NAD . . . X 4 161.387 134.079 203.772 1 54.76 ? O2B NAD 604 D 1 HETATM 12 C C1B NAD . . . X 4 161.152 132.159 202.39 1 54.76 ? C1B NAD 604 D 1 HETATM 13 N N9A NAD . . . X 4 162.108 131.077 202.658 1 54.76 ? N9A NAD 604 D 1 HETATM 14 C C8A NAD . . . X 4 163.418 130.88 202.649 1 54.76 ? C8A NAD 604 D 1 HETATM 15 N N7A NAD . . . X 4 163.61 129.62 203.022 1 54.76 ? N7A NAD 604 D 1 HETATM 16 C C5A NAD . . . X 4 162.419 129.065 203.258 1 54.76 ? C5A NAD 604 D 1 HETATM 17 C C6A NAD . . . X 4 162.066 127.812 203.659 1 54.76 ? C6A NAD 604 D 1 HETATM 18 N N6A NAD . . . X 4 162.744 126.583 203.998 1 54.76 ? N6A NAD 604 D 1 HETATM 19 N N1A NAD . . . X 4 160.802 127.506 203.823 1 54.76 ? N1A NAD 604 D 1 HETATM 20 C C2A NAD . . . X 4 159.849 128.428 203.598 1 54.76 ? C2A NAD 604 D 1 HETATM 21 N N3A NAD . . . X 4 160.194 129.664 203.201 1 54.76 ? N3A NAD 604 D 1 HETATM 22 C C4A NAD . . . X 4 161.482 129.97 203.035 1 54.76 ? C4A NAD 604 D 1 HETATM 23 O O3 NAD . . . X 4 165.787 135.607 199.499 1 54.76 ? O3 NAD 604 D 1 HETATM 24 P PN NAD . . . X 4 164.967 136.57 198.45 1 54.76 ? PN NAD 604 D 1 HETATM 25 O O1N NAD . . . X 4 164.143 137.57 199.207 1 54.76 ? O1N NAD 604 D 1 HETATM 26 O O2N NAD . . . X 4 164.06 135.764 197.56 1 54.76 ? O2N NAD 604 D 1 HETATM 27 O O5D NAD . . . X 4 166.039 137.327 197.477 1 54.76 ? O5D NAD 604 D 1 HETATM 28 C C5D NAD . . . X 4 166.728 136.487 196.605 1 54.76 ? C5D NAD 604 D 1 HETATM 29 C C4D NAD . . . X 4 168.13 137.024 196.487 1 54.76 ? C4D NAD 604 D 1 HETATM 30 O O4D NAD . . . X 4 168.037 138.625 196.603 1 54.76 ? O4D NAD 604 D 1 HETATM 31 C C3D NAD . . . X 4 168.844 136.586 197.478 1 54.76 ? C3D NAD 604 D 1 HETATM 32 O O3D NAD . . . X 4 170.098 136.001 196.938 1 54.76 ? O3D NAD 604 D 1 HETATM 33 C C2D NAD . . . X 4 169.216 137.797 198.334 1 54.76 ? C2D NAD 604 D 1 HETATM 34 O O2D NAD . . . X 4 170.541 137.754 198.592 1 54.76 ? O2D NAD 604 D 1 HETATM 35 C C1D NAD . . . X 4 168.946 138.998 197.439 1 54.76 ? C1D NAD 604 D 1 HETATM 36 N N1N NAD . . . X 4 168.376 140.075 198.239 1 54.76 ? N1N NAD 604 D 1 HETATM 37 C C2N NAD . . . X 4 169.162 140.733 199.095 1 54.76 ? C2N NAD 604 D 1 HETATM 38 C C3N NAD . . . X 4 168.624 141.752 199.834 1 54.76 ? C3N NAD 604 D 1 HETATM 39 C C7N NAD . . . X 4 169.51 142.512 200.795 1 54.76 ? C7N NAD 604 D 1 HETATM 40 O O7N NAD . . . X 4 170.109 141.931 201.623 1 54.76 ? O7N NAD 604 D 1 HETATM 41 N N7N NAD . . . X 4 169.628 143.951 200.657 1 54.76 ? N7N NAD 604 D 1 HETATM 42 C C4N NAD . . . X 4 167.324 142.085 199.7 1 54.76 ? C4N NAD 604 D 1 HETATM 43 C C5N NAD . . . X 4 166.534 141.419 198.834 1 54.76 ? C5N NAD 604 D 1 HETATM 44 C C6N NAD . . . X 4 167.079 140.394 198.094 1 54.76 ? C6N NAD 604 D 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 321 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #