data_7RFH
#
_model_server_result.job_id            CWoPRanRtDMrsoylQtbz0g 
_model_server_result.datetime_utc      '2024-12-27 01:24:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rfh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":602}' 
#
_entry.id    7RFH 
#
_exptl.entry_id    7RFH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7RFH 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RFH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7RFH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 ATP A 1 601 601 ATP ATP . 
J 2 ATP A 1 602 602 ATP ATP . 
K 2 ATP B 1 601 601 ATP ATP . 
L 2 ATP B 1 602 602 ATP ATP . 
M 2 ATP C 1 601 601 ATP ATP . 
N 2 ATP C 1 602 602 ATP ATP . 
O 2 ATP D 1 601 601 ATP ATP . 
P 2 ATP D 1 602 602 ATP ATP . 
Q 2 ATP E 1 601 601 ATP ATP . 
R 2 ATP E 1 602 602 ATP ATP . 
S 2 ATP F 1 601 601 ATP ATP . 
T 2 ATP F 1 602 602 ATP ATP . 
U 2 ATP G 1 601 601 ATP ATP . 
V 2 ATP G 1 602 602 ATP ATP . 
W 2 ATP H 1 601 601 ATP ATP . 
X 2 ATP H 1 602 602 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . V 2 128.09 199.359 165.884 1 73.24 ? PG ATP 602 G 1 
HETATM 2 O O1G ATP . . . V 2 128.527 198.094 166.522 1 73.24 ? O1G ATP 602 G 1 
HETATM 3 O O2G ATP . . . V 2 129.167 200.342 166.107 1 73.24 ? O2G ATP 602 G 1 
HETATM 4 O O3G ATP . . . V 2 126.839 199.768 166.547 1 73.24 ? O3G ATP 602 G 1 
HETATM 5 P PB ATP . . . V 2 127.047 200.16 163.519 1 73.24 ? PB ATP 602 G 1 
HETATM 6 O O1B ATP . . . V 2 125.586 199.856 163.57 1 73.24 ? O1B ATP 602 G 1 
HETATM 7 O O2B ATP . . . V 2 127.298 201.59 163.825 1 73.24 ? O2B ATP 602 G 1 
HETATM 8 O O3B ATP . . . V 2 127.885 199.138 164.358 1 73.24 ? O3B ATP 602 G 1 
HETATM 9 P PA ATP . . . V 2 128.82 200.397 161.451 1 73.24 ? PA ATP 602 G 1 
HETATM 10 O O1A ATP . . . V 2 130.06 200.177 162.238 1 73.24 ? O1A ATP 602 G 1 
HETATM 11 O O2A ATP . . . V 2 128.706 201.835 161.096 1 73.24 ? O2A ATP 602 G 1 
HETATM 12 O O3A ATP . . . V 2 127.536 199.766 162.081 1 73.24 ? O3A ATP 602 G 1 
HETATM 13 O O5' ATP . . . V 2 128.842 199.535 160.099 1 73.24 ? O5' ATP 602 G 1 
HETATM 14 C C5' ATP . . . V 2 129.751 198.43 159.981 1 73.24 ? C5' ATP 602 G 1 
HETATM 15 C C4' ATP . . . V 2 129.172 197.368 159.026 1 73.24 ? C4' ATP 602 G 1 
HETATM 16 O O4' ATP . . . V 2 128.029 196.752 159.638 1 73.24 ? O4' ATP 602 G 1 
HETATM 17 C C3' ATP . . . V 2 128.647 197.913 157.69 1 73.24 ? C3' ATP 602 G 1 
HETATM 18 O O3' ATP . . . V 2 129.694 198.049 156.724 1 73.24 ? O3' ATP 602 G 1 
HETATM 19 C C2' ATP . . . V 2 127.637 196.839 157.283 1 73.24 ? C2' ATP 602 G 1 
HETATM 20 O O2' ATP . . . V 2 128.337 195.808 156.583 1 73.24 ? O2' ATP 602 G 1 
HETATM 21 C C1' ATP . . . V 2 127.095 196.317 158.634 1 73.24 ? C1' ATP 602 G 1 
HETATM 22 N N9 ATP . . . V 2 125.808 196.876 158.977 1 73.24 ? N9 ATP 602 G 1 
HETATM 23 C C8 ATP . . . V 2 125.539 198.03 159.702 1 73.24 ? C8 ATP 602 G 1 
HETATM 24 N N7 ATP . . . V 2 124.221 198.266 159.834 1 73.24 ? N7 ATP 602 G 1 
HETATM 25 C C5 ATP . . . V 2 123.687 197.216 159.157 1 73.24 ? C5 ATP 602 G 1 
HETATM 26 C C6 ATP . . . V 2 122.354 196.897 158.942 1 73.24 ? C6 ATP 602 G 1 
HETATM 27 N N6 ATP . . . V 2 121.325 197.596 159.455 1 73.24 ? N6 ATP 602 G 1 
HETATM 28 N N1 ATP . . . V 2 121.989 195.829 158.268 1 73.24 ? N1 ATP 602 G 1 
HETATM 29 C C2 ATP . . . V 2 122.983 195.054 157.814 1 73.24 ? C2 ATP 602 G 1 
HETATM 30 N N3 ATP . . . V 2 124.296 195.268 157.963 1 73.24 ? N3 ATP 602 G 1 
HETATM 31 C C4 ATP . . . V 2 124.607 196.371 158.644 1 73.24 ? C4 ATP 602 G 1 
HETATM 32 H "H5'1" ATP . . . V 2 129.921 197.954 160.954 1 73.24 ? "H5'1" ATP 602 G 1 
HETATM 33 H "H5'2" ATP . . . V 2 130.716 198.783 159.597 1 73.24 ? "H5'2" ATP 602 G 1 
HETATM 34 H H4' ATP . . . V 2 129.933 196.601 158.835 1 73.24 ? H4' ATP 602 G 1 
HETATM 35 H H3' ATP . . . V 2 128.123 198.866 157.832 1 73.24 ? H3' ATP 602 G 1 
HETATM 36 H HO3' ATP . . . V 2 129.686 198.972 156.415 1 73.24 ? HO3' ATP 602 G 1 
HETATM 37 H H2' ATP . . . V 2 126.828 197.258 156.672 1 73.24 ? H2' ATP 602 G 1 
HETATM 38 H HO2' ATP . . . V 2 129.139 196.275 156.29 1 73.24 ? HO2' ATP 602 G 1 
HETATM 39 H H1' ATP . . . V 2 127.002 195.225 158.635 1 73.24 ? H1' ATP 602 G 1 
HETATM 40 H H8 ATP . . . V 2 126.333 198.652 160.093 1 73.24 ? H8 ATP 602 G 1 
HETATM 41 H HN61 ATP . . . V 2 121.557 198.129 160.284 1 73.24 ? HN61 ATP 602 G 1 
HETATM 42 H HN62 ATP . . . V 2 120.465 197.062 159.456 1 73.24 ? HN62 ATP 602 G 1 
HETATM 43 H H2 ATP . . . V 2 122.693 194.162 157.262 1 73.24 ? H2 ATP 602 G 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    53 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#