data_7RGB # _model_server_result.job_id KL8GREV0t3dKmA3sHMGzoQ _model_server_result.datetime_utc '2024-10-25 20:37:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rgb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 7RGB # _exptl.entry_id 7RGB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.44 _cell.angle_gamma 90 _cell.entry_id 7RGB _cell.length_a 76.372 _cell.length_b 72.186 _cell.length_c 139.626 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RGB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,O,P 1 1 C,D,I,J,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 I N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 218 A GLY 218 1_555 A N LLP 219 A LLP 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C LLP 219 A LLP 219 1_555 A N THR 220 A THR 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 B C GLY 218 B GLY 218 1_555 B N LLP 219 B LLP 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C LLP 219 B LLP 219 1_555 B N THR 220 B THR 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 C C GLY 218 C GLY 218 1_555 C N LLP 219 C LLP 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 C C LLP 219 C LLP 219 1_555 C N THR 220 C THR 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 D C GLY 218 D GLY 218 1_555 D N LLP 219 D LLP 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 D C LLP 219 D LLP 219 1_555 D N THR 220 D THR 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 91 n n C1 C2 BTB sing 92 n n C1 H11 BTB sing 93 n n C1 H12 BTB sing 94 n n O1 HO1 BTB sing 95 n n C2 C3 BTB sing 96 n n C2 C4 BTB sing 97 n n C2 N BTB sing 98 n n C3 O3 BTB sing 99 n n C3 H31 BTB sing 100 n n C3 H32 BTB sing 101 n n O3 HO3 BTB sing 102 n n C4 O4 BTB sing 103 n n C4 H41 BTB sing 104 n n C4 H42 BTB sing 105 n n O4 HO4 BTB sing 106 n n N C5 BTB sing 107 n n N C7 BTB sing 108 n n C5 C6 BTB sing 109 n n C5 H51 BTB sing 110 n n C5 H52 BTB sing 111 n n C6 O6 BTB sing 112 n n C6 H61 BTB sing 113 n n C6 H62 BTB sing 114 n n O6 HO6 BTB sing 115 n n C7 C8 BTB sing 116 n n C7 H71 BTB sing 117 n n C7 H72 BTB sing 118 n n C8 O8 BTB sing 119 n n C8 H81 BTB sing 120 n n C8 H82 BTB sing 121 n n O8 HO8 BTB sing 122 n n # _atom_sites.entry_id 7RGB _atom_sites.fract_transf_matrix[1][1] 0.013094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001944 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013853 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00724 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BTB A 1 401 401 BTB BTB . F 3 EDO A 1 402 501 EDO EDO . G 4 4VI A 1 403 601 4VI IM2 . H 2 BTB B 1 401 401 BTB BTB . I 2 BTB C 1 401 401 BTB BTB . J 3 EDO C 1 402 501 EDO EDO . K 4 4VI C 1 403 601 4VI IM2 . L 3 EDO C 1 404 1 EDO EDO . M 3 EDO C 1 405 2 EDO EDO . N 2 BTB D 1 401 401 BTB BTB . O 5 HOH A 1 501 39 HOH HOH . O 5 HOH A 2 502 182 HOH HOH . O 5 HOH A 3 503 3 HOH HOH . O 5 HOH A 4 504 139 HOH HOH . O 5 HOH A 5 505 142 HOH HOH . O 5 HOH A 6 506 126 HOH HOH . O 5 HOH A 7 507 64 HOH HOH . O 5 HOH A 8 508 123 HOH HOH . O 5 HOH A 9 509 128 HOH HOH . O 5 HOH A 10 510 143 HOH HOH . O 5 HOH A 11 511 85 HOH HOH . O 5 HOH A 12 512 135 HOH HOH . O 5 HOH A 13 513 113 HOH HOH . O 5 HOH A 14 514 95 HOH HOH . O 5 HOH A 15 515 118 HOH HOH . O 5 HOH A 16 516 115 HOH HOH . O 5 HOH A 17 517 66 HOH HOH . O 5 HOH A 18 518 94 HOH HOH . O 5 HOH A 19 519 38 HOH HOH . O 5 HOH A 20 520 12 HOH HOH . O 5 HOH A 21 521 6 HOH HOH . O 5 HOH A 22 522 77 HOH HOH . O 5 HOH A 23 523 5 HOH HOH . O 5 HOH A 24 524 124 HOH HOH . O 5 HOH A 25 525 144 HOH HOH . O 5 HOH A 26 526 7 HOH HOH . O 5 HOH A 27 527 9 HOH HOH . O 5 HOH A 28 528 25 HOH HOH . O 5 HOH A 29 529 105 HOH HOH . O 5 HOH A 30 530 69 HOH HOH . O 5 HOH A 31 531 152 HOH HOH . O 5 HOH A 32 532 92 HOH HOH . O 5 HOH A 33 533 40 HOH HOH . O 5 HOH A 34 534 78 HOH HOH . O 5 HOH A 35 535 61 HOH HOH . O 5 HOH A 36 536 127 HOH HOH . O 5 HOH A 37 537 162 HOH HOH . O 5 HOH A 38 538 175 HOH HOH . O 5 HOH A 39 539 166 HOH HOH . O 5 HOH A 40 540 13 HOH HOH . O 5 HOH A 41 541 184 HOH HOH . O 5 HOH A 42 542 84 HOH HOH . O 5 HOH A 43 543 73 HOH HOH . O 5 HOH A 44 544 138 HOH HOH . O 5 HOH A 45 545 116 HOH HOH . O 5 HOH A 46 546 173 HOH HOH . O 5 HOH A 47 547 22 HOH HOH . O 5 HOH A 48 548 146 HOH HOH . O 5 HOH A 49 549 98 HOH HOH . O 5 HOH A 50 550 23 HOH HOH . O 5 HOH A 51 551 76 HOH HOH . O 5 HOH A 52 552 186 HOH HOH . O 5 HOH A 53 553 24 HOH HOH . O 5 HOH A 54 554 75 HOH HOH . O 5 HOH A 55 555 74 HOH HOH . O 5 HOH A 56 556 114 HOH HOH . O 5 HOH A 57 557 141 HOH HOH . O 5 HOH A 58 558 104 HOH HOH . O 5 HOH A 59 559 129 HOH HOH . O 5 HOH A 60 560 185 HOH HOH . P 5 HOH B 1 501 183 HOH HOH . P 5 HOH B 2 502 43 HOH HOH . P 5 HOH B 3 503 136 HOH HOH . P 5 HOH B 4 504 164 HOH HOH . P 5 HOH B 5 505 67 HOH HOH . P 5 HOH B 6 506 163 HOH HOH . P 5 HOH B 7 507 117 HOH HOH . P 5 HOH B 8 508 62 HOH HOH . P 5 HOH B 9 509 36 HOH HOH . P 5 HOH B 10 510 125 HOH HOH . P 5 HOH B 11 511 171 HOH HOH . P 5 HOH B 12 512 68 HOH HOH . P 5 HOH B 13 513 147 HOH HOH . P 5 HOH B 14 514 72 HOH HOH . P 5 HOH B 15 515 2 HOH HOH . P 5 HOH B 16 516 131 HOH HOH . P 5 HOH B 17 517 41 HOH HOH . P 5 HOH B 18 518 130 HOH HOH . P 5 HOH B 19 519 65 HOH HOH . P 5 HOH B 20 520 37 HOH HOH . P 5 HOH B 21 521 145 HOH HOH . P 5 HOH B 22 522 177 HOH HOH . P 5 HOH B 23 523 71 HOH HOH . P 5 HOH B 24 524 42 HOH HOH . P 5 HOH B 25 525 83 HOH HOH . P 5 HOH B 26 526 88 HOH HOH . P 5 HOH B 27 527 70 HOH HOH . P 5 HOH B 28 528 93 HOH HOH . P 5 HOH B 29 529 63 HOH HOH . P 5 HOH B 30 530 165 HOH HOH . P 5 HOH B 31 531 99 HOH HOH . P 5 HOH B 32 532 96 HOH HOH . Q 5 HOH C 1 501 180 HOH HOH . Q 5 HOH C 2 502 4 HOH HOH . Q 5 HOH C 3 503 17 HOH HOH . Q 5 HOH C 4 504 87 HOH HOH . Q 5 HOH C 5 505 158 HOH HOH . Q 5 HOH C 6 506 103 HOH HOH . Q 5 HOH C 7 507 111 HOH HOH . Q 5 HOH C 8 508 140 HOH HOH . Q 5 HOH C 9 509 151 HOH HOH . Q 5 HOH C 10 510 120 HOH HOH . Q 5 HOH C 11 511 119 HOH HOH . Q 5 HOH C 12 512 30 HOH HOH . Q 5 HOH C 13 513 112 HOH HOH . Q 5 HOH C 14 514 35 HOH HOH . Q 5 HOH C 15 515 57 HOH HOH . Q 5 HOH C 16 516 122 HOH HOH . Q 5 HOH C 17 517 121 HOH HOH . Q 5 HOH C 18 518 19 HOH HOH . Q 5 HOH C 19 519 54 HOH HOH . Q 5 HOH C 20 520 81 HOH HOH . Q 5 HOH C 21 521 33 HOH HOH . Q 5 HOH C 22 522 10 HOH HOH . Q 5 HOH C 23 523 28 HOH HOH . Q 5 HOH C 24 524 29 HOH HOH . Q 5 HOH C 25 525 80 HOH HOH . Q 5 HOH C 26 526 133 HOH HOH . Q 5 HOH C 27 527 109 HOH HOH . Q 5 HOH C 28 528 11 HOH HOH . Q 5 HOH C 29 529 161 HOH HOH . Q 5 HOH C 30 530 150 HOH HOH . Q 5 HOH C 31 531 20 HOH HOH . Q 5 HOH C 32 532 82 HOH HOH . Q 5 HOH C 33 533 51 HOH HOH . Q 5 HOH C 34 534 21 HOH HOH . Q 5 HOH C 35 535 58 HOH HOH . Q 5 HOH C 36 536 149 HOH HOH . Q 5 HOH C 37 537 153 HOH HOH . Q 5 HOH C 38 538 168 HOH HOH . Q 5 HOH C 39 539 174 HOH HOH . Q 5 HOH C 40 540 52 HOH HOH . Q 5 HOH C 41 541 110 HOH HOH . Q 5 HOH C 42 542 172 HOH HOH . Q 5 HOH C 43 543 160 HOH HOH . Q 5 HOH C 44 544 14 HOH HOH . Q 5 HOH C 45 545 32 HOH HOH . Q 5 HOH C 46 546 16 HOH HOH . Q 5 HOH C 47 547 157 HOH HOH . Q 5 HOH C 48 548 176 HOH HOH . Q 5 HOH C 49 549 90 HOH HOH . Q 5 HOH C 50 550 15 HOH HOH . Q 5 HOH C 51 551 53 HOH HOH . Q 5 HOH C 52 552 31 HOH HOH . Q 5 HOH C 53 553 34 HOH HOH . Q 5 HOH C 54 554 18 HOH HOH . Q 5 HOH C 55 555 102 HOH HOH . Q 5 HOH C 56 556 101 HOH HOH . Q 5 HOH C 57 557 48 HOH HOH . Q 5 HOH C 58 558 100 HOH HOH . Q 5 HOH C 59 559 91 HOH HOH . Q 5 HOH C 60 560 86 HOH HOH . R 5 HOH D 1 501 181 HOH HOH . R 5 HOH D 2 502 47 HOH HOH . R 5 HOH D 3 503 155 HOH HOH . R 5 HOH D 4 504 46 HOH HOH . R 5 HOH D 5 505 137 HOH HOH . R 5 HOH D 6 506 108 HOH HOH . R 5 HOH D 7 507 55 HOH HOH . R 5 HOH D 8 508 154 HOH HOH . R 5 HOH D 9 509 27 HOH HOH . R 5 HOH D 10 510 106 HOH HOH . R 5 HOH D 11 511 60 HOH HOH . R 5 HOH D 12 512 45 HOH HOH . R 5 HOH D 13 513 170 HOH HOH . R 5 HOH D 14 514 178 HOH HOH . R 5 HOH D 15 515 8 HOH HOH . R 5 HOH D 16 516 1 HOH HOH . R 5 HOH D 17 517 132 HOH HOH . R 5 HOH D 18 518 159 HOH HOH . R 5 HOH D 19 519 134 HOH HOH . R 5 HOH D 20 520 56 HOH HOH . R 5 HOH D 21 521 167 HOH HOH . R 5 HOH D 22 522 59 HOH HOH . R 5 HOH D 23 523 49 HOH HOH . R 5 HOH D 24 524 26 HOH HOH . R 5 HOH D 25 525 79 HOH HOH . R 5 HOH D 26 526 89 HOH HOH . R 5 HOH D 27 527 50 HOH HOH . R 5 HOH D 28 528 187 HOH HOH . R 5 HOH D 29 529 148 HOH HOH . R 5 HOH D 30 530 44 HOH HOH . R 5 HOH D 31 531 107 HOH HOH . R 5 HOH D 32 532 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . H 2 39.072 25.545 36.94 1 80.49 ? C1 BTB 401 B 1 HETATM 2 O O1 BTB . . . H 2 40.182 25.443 37.721 1 80.29 ? O1 BTB 401 B 1 HETATM 3 C C2 BTB . . . H 2 39.566 25.821 35.56 1 81.28 ? C2 BTB 401 B 1 HETATM 4 C C3 BTB . . . H 2 40.422 24.672 35.171 1 80.3 ? C3 BTB 401 B 1 HETATM 5 O O3 BTB . . . H 2 41.233 25.142 34.179 1 79.85 ? O3 BTB 401 B 1 HETATM 6 C C4 BTB . . . H 2 40.353 27.109 35.69 1 80.5 ? C4 BTB 401 B 1 HETATM 7 O O4 BTB . . . H 2 40.321 27.832 34.525 1 80.32 ? O4 BTB 401 B 1 HETATM 8 N N BTB . . . H 2 38.452 25.916 34.661 1 83.82 ? N BTB 401 B 1 HETATM 9 C C5 BTB . . . H 2 37.344 25.047 35.016 1 84.7 ? C5 BTB 401 B 1 HETATM 10 C C6 BTB . . . H 2 37.779 23.619 35.292 1 85.4 ? C6 BTB 401 B 1 HETATM 11 O O6 BTB . . . H 2 36.658 22.805 35.143 1 85.75 ? O6 BTB 401 B 1 HETATM 12 C C7 BTB . . . H 2 38.769 25.735 33.268 1 84.77 ? C7 BTB 401 B 1 HETATM 13 C C8 BTB . . . H 2 37.798 26.604 32.466 1 85.32 ? C8 BTB 401 B 1 HETATM 14 O O8 BTB . . . H 2 38.462 27.383 31.524 1 85.36 ? O8 BTB 401 B 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 14 #