data_7RGG # _model_server_result.job_id jwSVjLb8a1DRNkeVbCoM9g _model_server_result.datetime_utc '2024-10-15 13:15:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rgg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 7RGG # _exptl.entry_id 7RGG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 524.681 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-[sulfanediylbis(ethane-2,1-diyl-1,3,4-thiadiazole-5,2-diyl)]bis(2-phenylacetamide)" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.001 _cell.angle_gamma 90 _cell.entry_id 7RGG _cell.length_a 50 _cell.length_b 138 _cell.length_c 178 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RGG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C24 H24 N6 O2 S3' _chem_comp.formula_weight 524.681 _chem_comp.id 04A _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-[sulfanediylbis(ethane-2,1-diyl-1,3,4-thiadiazole-5,2-diyl)]bis(2-phenylacetamide)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BPTES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAA CBB 04A doub 1 n n CBC OAB 04A doub 2 n n CAF CAC 04A doub 3 n y CAC CAE 04A sing 4 n y CAC HAC 04A sing 5 n n CAG CAD 04A doub 6 n y CAH CAD 04A sing 7 n y CAD HAD 04A sing 8 n n CAE CAI 04A doub 9 n y CAE HAE 04A sing 10 n n CAF CAJ 04A sing 11 n y CAF HAF 04A sing 12 n n CAK CAG 04A sing 13 n y CAG HAG 04A sing 14 n n CAL CAH 04A doub 15 n y CAH HAH 04A sing 16 n n CBD CAI 04A sing 17 n y CAI HAI 04A sing 18 n n CAJ CBD 04A doub 19 n y CAJ HAJ 04A sing 20 n n CBE CAK 04A doub 21 n y CAK HAK 04A sing 22 n n CBE CAL 04A sing 23 n y CAL HAL 04A sing 24 n n CAO CAM 04A sing 25 n n CAM SAY 04A sing 26 n n CAM HAM 04A sing 27 n n CAM HAMA 04A sing 28 n n SAY CAN 04A sing 29 n n CAP CAN 04A sing 30 n n CAN HAN 04A sing 31 n n CAN HANA 04A sing 32 n n CAO CBF 04A sing 33 n n CAO HAO 04A sing 34 n n CAO HAOA 04A sing 35 n n CBG CAP 04A sing 36 n n CAP HAP 04A sing 37 n n CAP HAPA 04A sing 38 n n CBB CAQ 04A sing 39 n n CBD CAQ 04A sing 40 n n CAQ HAQ 04A sing 41 n n CAQ HAQA 04A sing 42 n n CAR CBE 04A sing 43 n n CAR CBC 04A sing 44 n n CAR HAR 04A sing 45 n n CAR HARA 04A sing 46 n n CBF NAS 04A doub 47 n y NAS NAU 04A sing 48 n y NAV NAT 04A sing 49 n y NAT CBG 04A doub 50 n y CBH NAU 04A doub 51 n y NAV CBI 04A doub 52 n y CBB NAW 04A sing 53 n n CBH NAW 04A sing 54 n n NAW HNAW 04A sing 55 n n NAX CBI 04A sing 56 n n NAX CBC 04A sing 57 n n NAX HNAX 04A sing 58 n n SAZ CBF 04A sing 59 n y SAZ CBH 04A sing 60 n y CBI SBA 04A sing 61 n y CBG SBA 04A sing 62 n y # _atom_sites.entry_id 7RGG _atom_sites.fract_transf_matrix[1][1] 0.02 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005618 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 04A A 1 601 1 04A 04A . F 2 04A D 1 601 1 04A 04A . G 3 HOH A 1 701 2 HOH HOH . G 3 HOH A 2 702 1 HOH HOH . G 3 HOH A 3 703 4 HOH HOH . H 3 HOH D 1 701 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA 04A . . . F 2 3.659 44.223 -44.603 1 126.38 ? OAA 04A 601 D 1 HETATM 2 O OAB 04A . . . F 2 -11.632 43.079 -44.143 1 124.75 ? OAB 04A 601 D 1 HETATM 3 C CAC 04A . . . F 2 8.154 42.564 -42.494 1 127.96 ? CAC 04A 601 D 1 HETATM 4 C CAD 04A . . . F 2 -10.537 36.93 -43.922 1 128.12 ? CAD 04A 601 D 1 HETATM 5 C CAE 04A . . . F 2 7.069 43.4 -42.303 1 129.15 ? CAE 04A 601 D 1 HETATM 6 C CAF 04A . . . F 2 8.108 41.586 -43.48 1 132.86 ? CAF 04A 601 D 1 HETATM 7 C CAG 04A . . . F 2 -11.893 37.153 -43.756 1 128.18 ? CAG 04A 601 D 1 HETATM 8 C CAH 04A . . . F 2 -9.66 38.001 -43.892 1 133.4 ? CAH 04A 601 D 1 HETATM 9 C CAI 04A . . . F 2 5.941 43.255 -43.1 1 137.84 ? CAI 04A 601 D 1 HETATM 10 C CAJ 04A . . . F 2 6.979 41.441 -44.277 1 136.13 ? CAJ 04A 601 D 1 HETATM 11 C CAK 04A . . . F 2 -12.375 38.442 -43.558 1 132.29 ? CAK 04A 601 D 1 HETATM 12 C CAL 04A . . . F 2 -10.146 39.29 -43.694 1 137.8 ? CAL 04A 601 D 1 HETATM 13 C CAM 04A . . . F 2 -2.723 46.106 -43.395 1 96.18 ? CAM 04A 601 D 1 HETATM 14 C CAN 04A . . . F 2 -5.228 45.56 -44.835 1 89.93 ? CAN 04A 601 D 1 HETATM 15 C CAO 04A . . . F 2 -1.874 46.115 -44.659 1 113.55 ? CAO 04A 601 D 1 HETATM 16 C CAP 04A . . . F 2 -6.434 46.174 -44.125 1 92.79 ? CAP 04A 601 D 1 HETATM 17 C CAQ 04A . . . F 2 4.652 42.089 -45.001 1 134.9 ? CAQ 04A 601 D 1 HETATM 18 C CAR 04A . . . F 2 -12.146 40.92 -43.296 1 131.08 ? CAR 04A 601 D 1 HETATM 19 N NAS 04A . . . F 2 -0.645 44.644 -43.108 1 119.39 ? NAS 04A 601 D 1 HETATM 20 N NAT 04A . . . F 2 -6.797 44.231 -42.773 1 118.11 ? NAT 04A 601 D 1 HETATM 21 N NAU 04A . . . F 2 0.537 43.586 -43.131 1 133.63 ? NAU 04A 601 D 1 HETATM 22 N NAV 04A . . . F 2 -7.784 43.028 -42.449 1 125.45 ? NAV 04A 601 D 1 HETATM 23 N NAW 04A . . . F 2 2.128 42.515 -44.687 1 137.2 ? NAW 04A 601 D 1 HETATM 24 N NAX 04A . . . F 2 -9.86 42.096 -43.077 1 133.67 ? NAX 04A 601 D 1 HETATM 25 S SAY 04A . . . F 2 -3.995 44.857 -43.69 1 84.87 ? SAY 04A 601 D 1 HETATM 26 S SAZ 04A . . . F 2 0.228 44.392 -45.328 1 143.09 ? SAZ 04A 601 D 1 HETATM 27 S SBA 04A . . . F 2 -8.692 44.391 -44.174 1 120.89 ? SBA 04A 601 D 1 HETATM 28 C CBB 04A . . . F 2 3.483 43.05 -44.739 1 133.76 ? CBB 04A 601 D 1 HETATM 29 C CBC 04A . . . F 2 -11.227 42.124 -43.561 1 130.52 ? CBC 04A 601 D 1 HETATM 30 C CBD 04A . . . F 2 5.883 42.278 -44.094 1 139.34 ? CBD 04A 601 D 1 HETATM 31 C CBE 04A . . . F 2 -11.51 39.528 -43.526 1 135.25 ? CBE 04A 601 D 1 HETATM 32 C CBF 04A . . . F 2 -0.798 45.086 -44.406 1 123.12 ? CBF 04A 601 D 1 HETATM 33 C CBG 04A . . . F 2 -7.348 45.012 -43.775 1 108.3 ? CBG 04A 601 D 1 HETATM 34 C CBH 04A . . . F 2 1.027 43.432 -44.423 1 142.45 ? CBH 04A 601 D 1 HETATM 35 C CBI 04A . . . F 2 -8.896 43.156 -43.28 1 127.85 ? CBI 04A 601 D 1 # _model_server_stats.io_time_ms 94 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #