data_7RGK
#
_model_server_result.job_id            HjpG741b3AyG1onEAhXnBQ 
_model_server_result.datetime_utc      '2024-11-17 23:33:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rgk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":201}' 
#
_entry.id    7RGK 
#
_exptl.entry_id    7RGK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7RGK 
_cell.length_a            99.42 
_cell.length_b            99.42 
_cell.length_c            43.406 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RGK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    'P 4cw' 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 296 n n 
PA O2A NAP sing 297 n n 
PA O5B NAP sing 298 n n 
PA O3 NAP sing 299 n n 
O2A HOA2 NAP sing 300 n n 
O5B C5B NAP sing 301 n n 
C5B C4B NAP sing 302 n n 
C5B H51A NAP sing 303 n n 
C5B H52A NAP sing 304 n n 
C4B O4B NAP sing 305 n n 
C4B C3B NAP sing 306 n n 
C4B H4B NAP sing 307 n n 
O4B C1B NAP sing 308 n n 
C3B O3B NAP sing 309 n n 
C3B C2B NAP sing 310 n n 
C3B H3B NAP sing 311 n n 
O3B HO3A NAP sing 312 n n 
C2B O2B NAP sing 313 n n 
C2B C1B NAP sing 314 n n 
C2B H2B NAP sing 315 n n 
O2B P2B NAP sing 316 n n 
C1B N9A NAP sing 317 n n 
C1B H1B NAP sing 318 n n 
N9A C8A NAP sing 319 n y 
N9A C4A NAP sing 320 n y 
C8A N7A NAP doub 321 n y 
C8A H8A NAP sing 322 n n 
N7A C5A NAP sing 323 n y 
C5A C6A NAP sing 324 n y 
C5A C4A NAP doub 325 n y 
C6A N6A NAP sing 326 n n 
C6A N1A NAP doub 327 n y 
N6A H61A NAP sing 328 n n 
N6A H62A NAP sing 329 n n 
N1A C2A NAP sing 330 n y 
C2A N3A NAP doub 331 n y 
C2A H2A NAP sing 332 n n 
N3A C4A NAP sing 333 n y 
O3 PN NAP sing 334 n n 
PN O1N NAP doub 335 n n 
PN O2N NAP sing 336 n n 
PN O5D NAP sing 337 n n 
O5D C5D NAP sing 338 n n 
C5D C4D NAP sing 339 n n 
C5D H51N NAP sing 340 n n 
C5D H52N NAP sing 341 n n 
C4D O4D NAP sing 342 n n 
C4D C3D NAP sing 343 n n 
C4D H4D NAP sing 344 n n 
O4D C1D NAP sing 345 n n 
C3D O3D NAP sing 346 n n 
C3D C2D NAP sing 347 n n 
C3D H3D NAP sing 348 n n 
O3D HO3N NAP sing 349 n n 
C2D O2D NAP sing 350 n n 
C2D C1D NAP sing 351 n n 
C2D H2D NAP sing 352 n n 
O2D HO2N NAP sing 353 n n 
C1D N1N NAP sing 354 n n 
C1D H1D NAP sing 355 n n 
N1N C2N NAP sing 356 n y 
N1N C6N NAP doub 357 n y 
C2N C3N NAP doub 358 n y 
C2N H2N NAP sing 359 n n 
C3N C7N NAP sing 360 n n 
C3N C4N NAP sing 361 n y 
C7N O7N NAP doub 362 n n 
C7N N7N NAP sing 363 n n 
N7N H71N NAP sing 364 n n 
N7N H72N NAP sing 365 n n 
C4N C5N NAP doub 366 n y 
C4N H4N NAP sing 367 n n 
C5N C6N NAP sing 368 n y 
C5N H5N NAP sing 369 n n 
C6N H6N NAP sing 370 n n 
P2B O1X NAP doub 371 n n 
P2B O2X NAP sing 372 n n 
P2B O3X NAP sing 373 n n 
O2X HOP2 NAP sing 374 n n 
O3X HOP3 NAP sing 375 n n 
#
_atom_sites.entry_id                     7RGK 
_atom_sites.fract_transf_matrix[1][1]    0.010058 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010058 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023038 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 201 201 NAP NAP . 
D 3 SO4 A 1 202 2 SO4 SO4 . 
E 3 SO4 A 1 203 3 SO4 SO4 . 
F 4 560 A 1 204 1 560 DRG . 
G 2 NAP B 1 201 202 NAP NAP . 
H 3 SO4 B 1 202 1 SO4 SO4 . 
I 3 SO4 B 1 203 4 SO4 SO4 . 
J 4 560 B 1 204 2 560 DRG . 
K 5 HOH A 1 301 25 HOH HOH . 
K 5 HOH A 2 302 17 HOH HOH . 
K 5 HOH A 3 303 8 HOH HOH . 
K 5 HOH A 4 304 5 HOH HOH . 
K 5 HOH A 5 305 46 HOH HOH . 
K 5 HOH A 6 306 1 HOH HOH . 
K 5 HOH A 7 307 29 HOH HOH . 
K 5 HOH A 8 308 35 HOH HOH . 
K 5 HOH A 9 309 33 HOH HOH . 
K 5 HOH A 10 310 36 HOH HOH . 
K 5 HOH A 11 311 3 HOH HOH . 
K 5 HOH A 12 312 39 HOH HOH . 
K 5 HOH A 13 313 47 HOH HOH . 
K 5 HOH A 14 314 13 HOH HOH . 
K 5 HOH A 15 315 4 HOH HOH . 
K 5 HOH A 16 316 18 HOH HOH . 
K 5 HOH A 17 317 28 HOH HOH . 
K 5 HOH A 18 318 41 HOH HOH . 
K 5 HOH A 19 319 40 HOH HOH . 
L 5 HOH B 1 301 20 HOH HOH . 
L 5 HOH B 2 302 27 HOH HOH . 
L 5 HOH B 3 303 22 HOH HOH . 
L 5 HOH B 4 304 19 HOH HOH . 
L 5 HOH B 5 305 14 HOH HOH . 
L 5 HOH B 6 306 32 HOH HOH . 
L 5 HOH B 7 307 15 HOH HOH . 
L 5 HOH B 8 308 26 HOH HOH . 
L 5 HOH B 9 309 2 HOH HOH . 
L 5 HOH B 10 310 7 HOH HOH . 
L 5 HOH B 11 311 38 HOH HOH . 
L 5 HOH B 12 312 6 HOH HOH . 
L 5 HOH B 13 313 37 HOH HOH . 
L 5 HOH B 14 314 10 HOH HOH . 
L 5 HOH B 15 315 23 HOH HOH . 
L 5 HOH B 16 316 30 HOH HOH . 
L 5 HOH B 17 317 12 HOH HOH . 
L 5 HOH B 18 318 21 HOH HOH . 
L 5 HOH B 19 319 16 HOH HOH . 
L 5 HOH B 20 320 9 HOH HOH . 
L 5 HOH B 21 321 45 HOH HOH . 
L 5 HOH B 22 322 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . G 2 108.308 36.003 0.633 1 51.81 ? PA NAP 201 B 1 
HETATM 2 O O1A NAP . . . G 2 109.563 36.319 -0.092 1 46.11 ? O1A NAP 201 B 1 
HETATM 3 O O2A NAP . . . G 2 107.792 37.079 1.507 1 52.91 ? O2A NAP 201 B 1 
HETATM 4 O O5B NAP . . . G 2 107.214 35.671 -0.474 1 53.72 ? O5B NAP 201 B 1 
HETATM 5 C C5B NAP . . . G 2 107.471 34.619 -1.367 1 50.85 ? C5B NAP 201 B 1 
HETATM 6 C C4B NAP . . . G 2 106.342 34.709 -2.369 1 50.98 ? C4B NAP 201 B 1 
HETATM 7 O O4B NAP . . . G 2 106.45 35.895 -3.138 1 45.64 ? O4B NAP 201 B 1 
HETATM 8 C C3B NAP . . . G 2 106.337 33.549 -3.346 1 50.81 ? C3B NAP 201 B 1 
HETATM 9 O O3B NAP . . . G 2 105.738 32.437 -2.729 1 53.97 ? O3B NAP 201 B 1 
HETATM 10 C C2B NAP . . . G 2 105.513 34.179 -4.445 1 50.16 ? C2B NAP 201 B 1 
HETATM 11 O O2B NAP . . . G 2 104.19 34.307 -3.982 1 49.97 ? O2B NAP 201 B 1 
HETATM 12 C C1B NAP . . . G 2 106.055 35.598 -4.471 1 53.78 ? C1B NAP 201 B 1 
HETATM 13 N N9A NAP . . . G 2 107.183 35.707 -5.421 1 50.32 ? N9A NAP 201 B 1 
HETATM 14 C C8A NAP . . . G 2 108.517 35.583 -5.137 1 51.53 ? C8A NAP 201 B 1 
HETATM 15 N N7A NAP . . . G 2 109.221 35.756 -6.281 1 50.03 ? N7A NAP 201 B 1 
HETATM 16 C C5A NAP . . . G 2 108.364 35.997 -7.295 1 52.01 ? C5A NAP 201 B 1 
HETATM 17 C C6A NAP . . . G 2 108.56 36.235 -8.657 1 55.66 ? C6A NAP 201 B 1 
HETATM 18 N N6A NAP . . . G 2 109.788 36.267 -9.193 1 50.33 ? N6A NAP 201 B 1 
HETATM 19 N N1A NAP . . . G 2 107.453 36.448 -9.451 1 54.47 ? N1A NAP 201 B 1 
HETATM 20 C C2A NAP . . . G 2 106.179 36.424 -8.916 1 51.63 ? C2A NAP 201 B 1 
HETATM 21 N N3A NAP . . . G 2 105.996 36.175 -7.572 1 50.32 ? N3A NAP 201 B 1 
HETATM 22 C C4A NAP . . . G 2 107.074 35.966 -6.769 1 53.81 ? C4A NAP 201 B 1 
HETATM 23 O O3 NAP . . . G 2 108.373 34.587 1.408 1 55.52 ? O3 NAP 201 B 1 
HETATM 24 P PN NAP . . . G 2 109.539 33.818 2.211 1 54.15 ? PN NAP 201 B 1 
HETATM 25 O O1N NAP . . . G 2 108.977 32.56 2.769 1 55.08 ? O1N NAP 201 B 1 
HETATM 26 O O2N NAP . . . G 2 110.73 33.805 1.318 1 51.7 ? O2N NAP 201 B 1 
HETATM 27 O O5D NAP . . . G 2 109.838 34.856 3.402 1 52.11 ? O5D NAP 201 B 1 
HETATM 28 C C5D NAP . . . G 2 108.858 35.052 4.403 1 58.2 ? C5D NAP 201 B 1 
HETATM 29 C C4D NAP . . . G 2 109.506 34.973 5.778 1 55.5 ? C4D NAP 201 B 1 
HETATM 30 O O4D NAP . . . G 2 110.429 36.04 5.887 1 50.31 ? O4D NAP 201 B 1 
HETATM 31 C C3D NAP . . . G 2 108.507 35.137 6.915 1 58.97 ? C3D NAP 201 B 1 
HETATM 32 O O3D NAP . . . G 2 108.895 34.303 7.98 1 56.92 ? O3D NAP 201 B 1 
HETATM 33 C C2D NAP . . . G 2 108.715 36.547 7.392 1 54.5 ? C2D NAP 201 B 1 
HETATM 34 O O2D NAP . . . G 2 108.578 36.557 8.782 1 66.18 ? O2D NAP 201 B 1 
HETATM 35 C C1D NAP . . . G 2 110.176 36.764 7.072 1 55.91 ? C1D NAP 201 B 1 
HETATM 36 N N1N NAP . . . G 2 110.475 38.182 6.876 1 50.29 ? N1N NAP 201 B 1 
HETATM 37 C C2N NAP . . . G 2 111.494 38.739 7.598 1 43.48 ? C2N NAP 201 B 1 
HETATM 38 C C3N NAP . . . G 2 111.804 40.081 7.425 1 46.29 ? C3N NAP 201 B 1 
HETATM 39 C C7N NAP . . . G 2 113.024 40.626 8.098 1 45.33 ? C7N NAP 201 B 1 
HETATM 40 O O7N NAP . . . G 2 113.475 39.999 9.267 1 47.41 ? O7N NAP 201 B 1 
HETATM 41 N N7N NAP . . . G 2 113.656 41.671 7.581 1 46.97 ? N7N NAP 201 B 1 
HETATM 42 C C4N NAP . . . G 2 111.084 40.846 6.512 1 46.92 ? C4N NAP 201 B 1 
HETATM 43 C C5N NAP . . . G 2 110.057 40.254 5.775 1 50.2 ? C5N NAP 201 B 1 
HETATM 44 C C6N NAP . . . G 2 109.754 38.909 5.965 1 47.28 ? C6N NAP 201 B 1 
HETATM 45 P P2B NAP . . . G 2 103.047 33.219 -4.291 1 51.8 ? P2B NAP 201 B 1 
HETATM 46 O O1X NAP . . . G 2 103.23 32.083 -3.311 1 50.49 ? O1X NAP 201 B 1 
HETATM 47 O O2X NAP . . . G 2 101.705 33.851 -4.008 1 50.58 ? O2X NAP 201 B 1 
HETATM 48 O O3X NAP . . . G 2 103.173 32.831 -5.746 1 49.48 ? O3X NAP 201 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           48 
#