data_7RH1 # _model_server_result.job_id rao7jPiXeYUNnsqVgQ8ohw _model_server_result.datetime_utc '2024-11-23 12:40:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rh1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7RH1 # _exptl.entry_id 7RH1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 461.419 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl 3-O-(4-methylbenzoyl)-2-O-(3-nitrobenzoyl)-beta-D-talopyranoside' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RH1 _cell.length_a 36.163 _cell.length_b 58.34 _cell.length_c 63.188 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H23 N O10' _chem_comp.formula_weight 461.419 _chem_comp.id 5EI _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl 3-O-(4-methylbenzoyl)-2-O-(3-nitrobenzoyl)-beta-D-talopyranoside' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O8 C9 5EI doub 1 n n CB2 CB3 5EI doub 2 n y CB2 CB1 5EI sing 3 n y CB3 CB4 5EI sing 4 n y C9 CB1 5EI sing 5 n n C9 O3 5EI sing 6 n n CB1 CB6 5EI doub 7 n y C7 O1 5EI sing 8 n n CB4 C10 5EI sing 9 n n CB4 CB5 5EI doub 10 n y C3 C2 5EI sing 11 n n C3 O3 5EI sing 12 n n C3 C4 5EI sing 13 n n C1 C2 5EI sing 14 n n C1 O1 5EI sing 15 n n C1 O5 5EI sing 16 n n C2 O2 5EI sing 17 n n CB6 CB5 5EI sing 18 n y O7 C8 5EI doub 19 n n C5 C4 5EI sing 20 n n C5 O5 5EI sing 21 n n C5 C6 5EI sing 22 n n C4 O4 5EI sing 23 n n O2 C8 5EI sing 24 n n C8 CA1 5EI sing 25 n n O6 C6 5EI sing 26 n n CA1 CA6 5EI doub 27 n y CA1 CA2 5EI sing 28 n y CA6 CA5 5EI sing 29 n y CA2 CA3 5EI doub 30 n y CA5 CA4 5EI doub 31 n y CA3 CA4 5EI sing 32 n y CA3 N1 5EI sing 33 n n ON2 N1 5EI sing 34 n n N1 ON1 5EI doub 35 n n C1 H1 5EI sing 36 n n C6 H2 5EI sing 37 n n C6 H3 5EI sing 38 n n C5 H4 5EI sing 39 n n C4 H5 5EI sing 40 n n C3 H6 5EI sing 41 n n C2 H7 5EI sing 42 n n C7 H8 5EI sing 43 n n C7 H9 5EI sing 44 n n C7 H10 5EI sing 45 n n O4 H11 5EI sing 46 n n O6 H12 5EI sing 47 n n CB2 H13 5EI sing 48 n n CB6 H14 5EI sing 49 n n CB3 H15 5EI sing 50 n n CB5 H16 5EI sing 51 n n C10 H17 5EI sing 52 n n C10 H18 5EI sing 53 n n C10 H19 5EI sing 54 n n CA6 H20 5EI sing 55 n n CA2 H21 5EI sing 56 n n CA5 H22 5EI sing 57 n n CA4 H23 5EI sing 58 n n # _atom_sites.entry_id 7RH1 _atom_sites.fract_transf_matrix[1][1] 0.027653 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015826 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 301 1 CL CL . C 2 CL A 1 302 2 CL CL . D 3 5EI A 1 303 1 5EI T11 . E 4 HOH A 1 401 80 HOH HOH . E 4 HOH A 2 402 140 HOH HOH . E 4 HOH A 3 403 143 HOH HOH . E 4 HOH A 4 404 179 HOH HOH . E 4 HOH A 5 405 26 HOH HOH . E 4 HOH A 6 406 145 HOH HOH . E 4 HOH A 7 407 156 HOH HOH . E 4 HOH A 8 408 131 HOH HOH . E 4 HOH A 9 409 76 HOH HOH . E 4 HOH A 10 410 130 HOH HOH . E 4 HOH A 11 411 2 HOH HOH . E 4 HOH A 12 412 91 HOH HOH . E 4 HOH A 13 413 110 HOH HOH . E 4 HOH A 14 414 29 HOH HOH . E 4 HOH A 15 415 42 HOH HOH . E 4 HOH A 16 416 63 HOH HOH . E 4 HOH A 17 417 109 HOH HOH . E 4 HOH A 18 418 30 HOH HOH . E 4 HOH A 19 419 73 HOH HOH . E 4 HOH A 20 420 154 HOH HOH . E 4 HOH A 21 421 88 HOH HOH . E 4 HOH A 22 422 11 HOH HOH . E 4 HOH A 23 423 180 HOH HOH . E 4 HOH A 24 424 90 HOH HOH . E 4 HOH A 25 425 149 HOH HOH . E 4 HOH A 26 426 86 HOH HOH . E 4 HOH A 27 427 152 HOH HOH . E 4 HOH A 28 428 126 HOH HOH . E 4 HOH A 29 429 65 HOH HOH . E 4 HOH A 30 430 20 HOH HOH . E 4 HOH A 31 431 62 HOH HOH . E 4 HOH A 32 432 52 HOH HOH . E 4 HOH A 33 433 173 HOH HOH . E 4 HOH A 34 434 108 HOH HOH . E 4 HOH A 35 435 89 HOH HOH . E 4 HOH A 36 436 17 HOH HOH . E 4 HOH A 37 437 57 HOH HOH . E 4 HOH A 38 438 81 HOH HOH . E 4 HOH A 39 439 98 HOH HOH . E 4 HOH A 40 440 186 HOH HOH . E 4 HOH A 41 441 31 HOH HOH . E 4 HOH A 42 442 134 HOH HOH . E 4 HOH A 43 443 5 HOH HOH . E 4 HOH A 44 444 22 HOH HOH . E 4 HOH A 45 445 122 HOH HOH . E 4 HOH A 46 446 40 HOH HOH . E 4 HOH A 47 447 121 HOH HOH . E 4 HOH A 48 448 175 HOH HOH . E 4 HOH A 49 449 15 HOH HOH . E 4 HOH A 50 450 111 HOH HOH . E 4 HOH A 51 451 155 HOH HOH . E 4 HOH A 52 452 13 HOH HOH . E 4 HOH A 53 453 8 HOH HOH . E 4 HOH A 54 454 174 HOH HOH . E 4 HOH A 55 455 6 HOH HOH . E 4 HOH A 56 456 44 HOH HOH . E 4 HOH A 57 457 39 HOH HOH . E 4 HOH A 58 458 172 HOH HOH . E 4 HOH A 59 459 14 HOH HOH . E 4 HOH A 60 460 61 HOH HOH . E 4 HOH A 61 461 167 HOH HOH . E 4 HOH A 62 462 82 HOH HOH . E 4 HOH A 63 463 77 HOH HOH . E 4 HOH A 64 464 97 HOH HOH . E 4 HOH A 65 465 25 HOH HOH . E 4 HOH A 66 466 189 HOH HOH . E 4 HOH A 67 467 3 HOH HOH . E 4 HOH A 68 468 75 HOH HOH . E 4 HOH A 69 469 7 HOH HOH . E 4 HOH A 70 470 33 HOH HOH . E 4 HOH A 71 471 142 HOH HOH . E 4 HOH A 72 472 83 HOH HOH . E 4 HOH A 73 473 53 HOH HOH . E 4 HOH A 74 474 139 HOH HOH . E 4 HOH A 75 475 170 HOH HOH . E 4 HOH A 76 476 10 HOH HOH . E 4 HOH A 77 477 67 HOH HOH . E 4 HOH A 78 478 177 HOH HOH . E 4 HOH A 79 479 132 HOH HOH . E 4 HOH A 80 480 38 HOH HOH . E 4 HOH A 81 481 27 HOH HOH . E 4 HOH A 82 482 141 HOH HOH . E 4 HOH A 83 483 37 HOH HOH . E 4 HOH A 84 484 137 HOH HOH . E 4 HOH A 85 485 78 HOH HOH . E 4 HOH A 86 486 157 HOH HOH . E 4 HOH A 87 487 159 HOH HOH . E 4 HOH A 88 488 129 HOH HOH . E 4 HOH A 89 489 19 HOH HOH . E 4 HOH A 90 490 55 HOH HOH . E 4 HOH A 91 491 24 HOH HOH . E 4 HOH A 92 492 176 HOH HOH . E 4 HOH A 93 493 181 HOH HOH . E 4 HOH A 94 494 162 HOH HOH . E 4 HOH A 95 495 60 HOH HOH . E 4 HOH A 96 496 46 HOH HOH . E 4 HOH A 97 497 151 HOH HOH . E 4 HOH A 98 498 169 HOH HOH . E 4 HOH A 99 499 41 HOH HOH . E 4 HOH A 100 500 50 HOH HOH . E 4 HOH A 101 501 34 HOH HOH . E 4 HOH A 102 502 120 HOH HOH . E 4 HOH A 103 503 54 HOH HOH . E 4 HOH A 104 504 148 HOH HOH . E 4 HOH A 105 505 43 HOH HOH . E 4 HOH A 106 506 113 HOH HOH . E 4 HOH A 107 507 21 HOH HOH . E 4 HOH A 108 508 18 HOH HOH . E 4 HOH A 109 509 12 HOH HOH . E 4 HOH A 110 510 136 HOH HOH . E 4 HOH A 111 511 119 HOH HOH . E 4 HOH A 112 512 124 HOH HOH . E 4 HOH A 113 513 150 HOH HOH . E 4 HOH A 114 514 36 HOH HOH . E 4 HOH A 115 515 68 HOH HOH . E 4 HOH A 116 516 49 HOH HOH . E 4 HOH A 117 517 161 HOH HOH . E 4 HOH A 118 518 4 HOH HOH . E 4 HOH A 119 519 32 HOH HOH . E 4 HOH A 120 520 51 HOH HOH . E 4 HOH A 121 521 35 HOH HOH . E 4 HOH A 122 522 112 HOH HOH . E 4 HOH A 123 523 16 HOH HOH . E 4 HOH A 124 524 107 HOH HOH . E 4 HOH A 125 525 125 HOH HOH . E 4 HOH A 126 526 106 HOH HOH . E 4 HOH A 127 527 1 HOH HOH . E 4 HOH A 128 528 158 HOH HOH . E 4 HOH A 129 529 187 HOH HOH . E 4 HOH A 130 530 58 HOH HOH . E 4 HOH A 131 531 59 HOH HOH . E 4 HOH A 132 532 92 HOH HOH . E 4 HOH A 133 533 138 HOH HOH . E 4 HOH A 134 534 74 HOH HOH . E 4 HOH A 135 535 115 HOH HOH . E 4 HOH A 136 536 101 HOH HOH . E 4 HOH A 137 537 103 HOH HOH . E 4 HOH A 138 538 48 HOH HOH . E 4 HOH A 139 539 153 HOH HOH . E 4 HOH A 140 540 69 HOH HOH . E 4 HOH A 141 541 71 HOH HOH . E 4 HOH A 142 542 128 HOH HOH . E 4 HOH A 143 543 123 HOH HOH . E 4 HOH A 144 544 135 HOH HOH . E 4 HOH A 145 545 171 HOH HOH . E 4 HOH A 146 546 163 HOH HOH . E 4 HOH A 147 547 178 HOH HOH . E 4 HOH A 148 548 166 HOH HOH . E 4 HOH A 149 549 133 HOH HOH . E 4 HOH A 150 550 45 HOH HOH . E 4 HOH A 151 551 87 HOH HOH . E 4 HOH A 152 552 188 HOH HOH . E 4 HOH A 153 553 93 HOH HOH . E 4 HOH A 154 554 28 HOH HOH . E 4 HOH A 155 555 79 HOH HOH . E 4 HOH A 156 556 66 HOH HOH . E 4 HOH A 157 557 84 HOH HOH . E 4 HOH A 158 558 96 HOH HOH . E 4 HOH A 159 559 72 HOH HOH . E 4 HOH A 160 560 102 HOH HOH . E 4 HOH A 161 561 9 HOH HOH . E 4 HOH A 162 562 144 HOH HOH . E 4 HOH A 163 563 164 HOH HOH . E 4 HOH A 164 564 183 HOH HOH . E 4 HOH A 165 565 184 HOH HOH . E 4 HOH A 166 566 147 HOH HOH . E 4 HOH A 167 567 95 HOH HOH . E 4 HOH A 168 568 160 HOH HOH . E 4 HOH A 169 569 127 HOH HOH . E 4 HOH A 170 570 182 HOH HOH . E 4 HOH A 171 571 85 HOH HOH . E 4 HOH A 172 572 56 HOH HOH . E 4 HOH A 173 573 146 HOH HOH . E 4 HOH A 174 574 165 HOH HOH . E 4 HOH A 175 575 118 HOH HOH . E 4 HOH A 176 576 64 HOH HOH . E 4 HOH A 177 577 94 HOH HOH . E 4 HOH A 178 578 23 HOH HOH . E 4 HOH A 179 579 168 HOH HOH . E 4 HOH A 180 580 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5EI . . . D 3 20.114 -8.724 -1.939 1 24.25 0 C1 5EI 303 A 1 HETATM 2 C C6 5EI . . . D 3 20.114 -5.562 -0.16 1 16.99 0 C6 5EI 303 A 1 HETATM 3 C C5 5EI . . . D 3 19.59 -6.562 -1.148 1 18.3 0 C5 5EI 303 A 1 HETATM 4 C C4 5EI . . . D 3 18.101 -6.898 -1.03 1 19.55 0 C4 5EI 303 A 1 HETATM 5 C C3 5EI . . . D 3 17.713 -8.034 -1.991 1 24.28 0 C3 5EI 303 A 1 HETATM 6 C C2 5EI . . . D 3 18.667 -9.217 -1.917 1 26.74 0 C2 5EI 303 A 1 HETATM 7 C C7 5EI . . . D 3 22.318 -9.615 -2.175 1 28.95 0 C7 5EI 303 A 1 HETATM 8 O O5 5EI . . . D 3 20.375 -7.746 -0.947 1 21.74 0 O5 5EI 303 A 1 HETATM 9 O O1 5EI . . . D 3 20.976 -9.794 -1.657 1 29.17 0 O1 5EI 303 A 1 HETATM 10 O O2 5EI . . . D 3 18.383 -9.988 -0.719 1 32.16 0 O2 5EI 303 A 1 HETATM 11 C C8 5EI . . . D 3 18.958 -11.212 -0.596 1 49.43 0 C8 5EI 303 A 1 HETATM 12 O O3 5EI . . . D 3 16.378 -8.532 -1.726 1 24.49 0 O3 5EI 303 A 1 HETATM 13 C C9 5EI . . . D 3 15.365 -7.955 -2.39 1 28.46 0 C9 5EI 303 A 1 HETATM 14 O O4 5EI . . . D 3 17.786 -7.221 0.322 1 18.11 0 O4 5EI 303 A 1 HETATM 15 O O6 5EI . . . D 3 21.521 -5.32 -0.295 1 18.77 0 O6 5EI 303 A 1 HETATM 16 O O8 5EI . . . D 3 15.49 -6.965 -3.077 1 32.19 0 O8 5EI 303 A 1 HETATM 17 O O7 5EI . . . D 3 19.747 -11.67 -1.395 1 57.37 0 O7 5EI 303 A 1 HETATM 18 C CA1 5EI . . . D 3 18.483 -11.969 0.603 1 52.31 0 CA1 5EI 303 A 1 HETATM 19 C CB1 5EI . . . D 3 14.072 -8.703 -2.239 1 28.63 0 CB1 5EI 303 A 1 HETATM 20 C CB2 5EI . . . D 3 12.936 -8.194 -2.857 1 30.27 0 CB2 5EI 303 A 1 HETATM 21 C CB6 5EI . . . D 3 13.965 -9.921 -1.56 1 32.08 0 CB6 5EI 303 A 1 HETATM 22 C CB3 5EI . . . D 3 11.732 -8.879 -2.794 1 31.02 0 CB3 5EI 303 A 1 HETATM 23 C CB5 5EI . . . D 3 12.756 -10.595 -1.51 1 30.84 0 CB5 5EI 303 A 1 HETATM 24 C CB4 5EI . . . D 3 11.625 -10.093 -2.129 1 32.36 0 CB4 5EI 303 A 1 HETATM 25 C C10 5EI . . . D 3 10.323 -10.854 -2.107 1 36.45 0 C10 5EI 303 A 1 HETATM 26 C CA6 5EI . . . D 3 19.253 -13.077 0.964 1 57.26 0 CA6 5EI 303 A 1 HETATM 27 C CA2 5EI . . . D 3 17.424 -11.577 1.422 1 50.59 0 CA2 5EI 303 A 1 HETATM 28 C CA5 5EI . . . D 3 18.978 -13.78 2.123 1 59.68 0 CA5 5EI 303 A 1 HETATM 29 C CA3 5EI . . . D 3 17.165 -12.312 2.57 1 53.53 0 CA3 5EI 303 A 1 HETATM 30 N N1 5EI . . . D 3 16.082 -11.875 3.477 1 52.85 0 N1 5EI 303 A 1 HETATM 31 C CA4 5EI . . . D 3 17.924 -13.41 2.94 1 59.52 0 CA4 5EI 303 A 1 HETATM 32 O ON2 5EI . . . D 3 15.528 -10.775 3.265 1 29.29 0 ON2 5EI 303 A 1 HETATM 33 O ON1 5EI . . . D 3 15.845 -12.587 4.461 1 41.81 0 ON1 5EI 303 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #