data_7RHN # _model_server_result.job_id e02BX4-qvM2NqIqws_fsyA _model_server_result.datetime_utc '2024-12-01 10:30:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rhn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 7RHN # _exptl.entry_id 7RHN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7RHN _cell.length_a 89.73 _cell.length_b 89.73 _cell.length_c 56.092 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RHN _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall 'P 6' _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 C CYS 14 1_555 A SG CYS 45 C CYS 45 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 198 C CYS 198 1_555 A SG CYS 218 C CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7RHN _atom_sites.fract_transf_matrix[1][1] 0.011145 _atom_sites.fract_transf_matrix[1][2] 0.006434 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017828 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QNG C 1 301 301 QNG LIG . C 3 IOD C 1 302 3 IOD IOD . D 3 IOD C 1 303 4 IOD IOD . E 3 IOD C 1 304 5 IOD IOD . F 4 CL C 1 305 1 CL CL . G 4 CL C 1 306 2 CL CL . H 4 CL C 1 307 3 CL CL . I 4 CL C 1 308 4 CL CL . J 5 HOH C 1 401 20 HOH HOH . J 5 HOH C 2 402 19 HOH HOH . J 5 HOH C 3 403 25 HOH HOH . J 5 HOH C 4 404 37 HOH HOH . J 5 HOH C 5 405 26 HOH HOH . J 5 HOH C 6 406 36 HOH HOH . J 5 HOH C 7 407 18 HOH HOH . J 5 HOH C 8 408 17 HOH HOH . J 5 HOH C 9 409 55 HOH HOH . J 5 HOH C 10 410 48 HOH HOH . J 5 HOH C 11 411 34 HOH HOH . J 5 HOH C 12 412 11 HOH HOH . J 5 HOH C 13 413 30 HOH HOH . J 5 HOH C 14 414 7 HOH HOH . J 5 HOH C 15 415 24 HOH HOH . J 5 HOH C 16 416 47 HOH HOH . J 5 HOH C 17 417 15 HOH HOH . J 5 HOH C 18 418 5 HOH HOH . J 5 HOH C 19 419 27 HOH HOH . J 5 HOH C 20 420 1 HOH HOH . J 5 HOH C 21 421 32 HOH HOH . J 5 HOH C 22 422 8 HOH HOH . J 5 HOH C 23 423 9 HOH HOH . J 5 HOH C 24 424 46 HOH HOH . J 5 HOH C 25 425 35 HOH HOH . J 5 HOH C 26 426 16 HOH HOH . J 5 HOH C 27 427 6 HOH HOH . J 5 HOH C 28 428 14 HOH HOH . J 5 HOH C 29 429 29 HOH HOH . J 5 HOH C 30 430 28 HOH HOH . J 5 HOH C 31 431 31 HOH HOH . J 5 HOH C 32 432 50 HOH HOH . J 5 HOH C 33 433 3 HOH HOH . J 5 HOH C 34 434 10 HOH HOH . J 5 HOH C 35 435 2 HOH HOH . J 5 HOH C 36 436 12 HOH HOH . J 5 HOH C 37 437 54 HOH HOH . J 5 HOH C 38 438 23 HOH HOH . J 5 HOH C 39 439 22 HOH HOH . J 5 HOH C 40 440 4 HOH HOH . J 5 HOH C 41 441 51 HOH HOH . J 5 HOH C 42 442 52 HOH HOH . J 5 HOH C 43 443 53 HOH HOH . J 5 HOH C 44 444 56 HOH HOH . J 5 HOH C 45 445 13 HOH HOH . J 5 HOH C 46 446 49 HOH HOH . J 5 HOH C 47 447 57 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.68 _atom_site.Cartn_y 1.391 _atom_site.Cartn_z -21.772 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 111.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 302 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #