data_7RIJ # _model_server_result.job_id g729BbTpuugy3G7cmugA2w _model_server_result.datetime_utc '2025-03-06 08:47:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rij # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 7RIJ # _exptl.entry_id 7RIJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 65.58 _cell.angle_beta 66.17 _cell.angle_gamma 76.03 _cell.entry_id 7RIJ _cell.length_a 22.655 _cell.length_b 23.85 _cell.length_c 24.246 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RIJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 20 A CYS 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 8 A CYS 8 1_555 A SG CYS 22 A CYS 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 13 A CYS 13 1_555 A SG CYS 27 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 B SG DCY 4 B DCY 4 1_555 B SG DCY 20 B DCY 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf5 B SG DCY 8 B DCY 8 1_555 B SG DCY 22 B DCY 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 B SG DCY 13 B DCY 13 1_555 B SG DCY 27 B DCY 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale1 A N GLY 1 A GLY 1 1_555 A C ASN 30 A ASN 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 B C GLY 1 B GLY 1 1_555 B N DPN 2 B DPN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B N GLY 1 B GLY 1 1_555 B C DSG 30 B DSG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? covale ? covale4 B C DPN 2 B DPN 2 1_555 B N DPR 3 B DPR 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale5 B C DPR 3 B DPR 3 1_555 B N DCY 4 B DCY 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 B C DCY 4 B DCY 4 1_555 B N GLY 5 B GLY 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B C GLY 5 B GLY 5 1_555 B N DGL 6 B DGL 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 B C DGL 6 B DGL 6 1_555 B N DSN 7 B DSN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 B C DSN 7 B DSN 7 1_555 B N DCY 8 B DCY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 B C DCY 8 B DCY 8 1_555 B N DVA 9 B DVA 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale11 B C DVA 9 B DVA 9 1_555 B N DTY 10 B DTY 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 B C DTY 10 B DTY 10 1_555 B N DLE 11 B DLE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale13 B C DLE 11 B DLE 11 1_555 B N DPR 12 B DPR 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale14 B C DPR 12 B DPR 12 1_555 B N DCY 13 B DCY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale15 B C DCY 13 B DCY 13 1_555 B N DPN 14 B DPN 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale16 B C DPN 14 B DPN 14 1_555 B N DTH 15 B DTH 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale17 B C DTH 15 B DTH 15 1_555 B N DAL 16 B DAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 B C DAL 16 B DAL 16 1_555 B N DAL 17 B DAL 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale19 B C DAL 17 B DAL 17 1_555 B N DIL 18 B DIL 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale20 B C DIL 18 B DIL 18 1_555 B N GLY 19 B GLY 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale21 B C GLY 19 B GLY 19 1_555 B N DCY 20 B DCY 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale22 B C DCY 20 B DCY 20 1_555 B N DSN 21 B DSN 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 B C DSN 21 B DSN 21 1_555 B N DCY 22 B DCY 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale24 B C DCY 22 B DCY 22 1_555 B N DLY 23 B DLY 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale25 B C DLY 23 B DLY 23 1_555 B N DSN 24 B DSN 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale26 B C DSN 24 B DSN 24 1_555 B N DLY 25 B DLY 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 B C DLY 25 B DLY 25 1_555 B N DVA 26 B DVA 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale28 B C DVA 26 B DVA 26 1_555 B N DCY 27 B DCY 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale29 B C DCY 27 B DCY 27 1_555 B N DTY 28 B DTY 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale30 B C DTY 28 B DTY 28 1_555 B N DLY 29 B DLY 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale31 B C DLY 29 B DLY 29 1_555 B N DSG 30 B DSG 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 7RIJ _atom_sites.fract_transf_matrix[1][1] 0.04414 _atom_sites.fract_transf_matrix[1][2] -0.010978 _atom_sites.fract_transf_matrix[1][3] -0.016678 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.043206 _atom_sites.fract_transf_matrix[2][3] -0.016451 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.048245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT A 1 101 101 ACT ACT . D 3 ACT A 1 102 201 ACT ACT . E 3 ACT B 1 201 201 ACT ACT . F 4 HOH A 1 201 48 HOH HOH . F 4 HOH A 2 202 54 HOH HOH . F 4 HOH A 3 203 27 HOH HOH . F 4 HOH A 4 204 31 HOH HOH . F 4 HOH A 5 205 11 HOH HOH . F 4 HOH A 6 206 28 HOH HOH . F 4 HOH A 7 207 4 HOH HOH . F 4 HOH A 8 208 53 HOH HOH . F 4 HOH A 9 209 2 HOH HOH . F 4 HOH A 10 210 52 HOH HOH . F 4 HOH A 11 211 14 HOH HOH . F 4 HOH A 12 212 36 HOH HOH . F 4 HOH A 13 213 23 HOH HOH . F 4 HOH A 14 214 5 HOH HOH . F 4 HOH A 15 215 41 HOH HOH . F 4 HOH A 16 216 37 HOH HOH . F 4 HOH A 17 217 46 HOH HOH . F 4 HOH A 18 218 21 HOH HOH . F 4 HOH A 19 219 17 HOH HOH . F 4 HOH A 20 220 6 HOH HOH . F 4 HOH A 21 221 29 HOH HOH . F 4 HOH A 22 222 60 HOH HOH . F 4 HOH A 23 223 81 HOH HOH . F 4 HOH A 24 224 42 HOH HOH . F 4 HOH A 25 225 47 HOH HOH . F 4 HOH A 26 226 57 HOH HOH . F 4 HOH A 27 227 77 HOH HOH . F 4 HOH A 28 228 50 HOH HOH . F 4 HOH A 29 229 76 HOH HOH . F 4 HOH A 30 230 45 HOH HOH . F 4 HOH A 31 231 72 HOH HOH . F 4 HOH A 32 232 80 HOH HOH . G 4 HOH B 1 301 38 HOH HOH . G 4 HOH B 2 302 34 HOH HOH . G 4 HOH B 3 303 63 HOH HOH . G 4 HOH B 4 304 71 HOH HOH . G 4 HOH B 5 305 65 HOH HOH . G 4 HOH B 6 306 20 HOH HOH . G 4 HOH B 7 307 67 HOH HOH . G 4 HOH B 8 308 15 HOH HOH . G 4 HOH B 9 309 8 HOH HOH . G 4 HOH B 10 310 10 HOH HOH . G 4 HOH B 11 311 30 HOH HOH . G 4 HOH B 12 312 78 HOH HOH . G 4 HOH B 13 313 13 HOH HOH . G 4 HOH B 14 314 7 HOH HOH . G 4 HOH B 15 315 79 HOH HOH . G 4 HOH B 16 316 68 HOH HOH . G 4 HOH B 17 317 49 HOH HOH . G 4 HOH B 18 318 32 HOH HOH . G 4 HOH B 19 319 40 HOH HOH . G 4 HOH B 20 320 16 HOH HOH . G 4 HOH B 21 321 1 HOH HOH . G 4 HOH B 22 322 33 HOH HOH . G 4 HOH B 23 323 61 HOH HOH . G 4 HOH B 24 324 9 HOH HOH . G 4 HOH B 25 325 75 HOH HOH . G 4 HOH B 26 326 18 HOH HOH . G 4 HOH B 27 327 44 HOH HOH . G 4 HOH B 28 328 22 HOH HOH . G 4 HOH B 29 329 59 HOH HOH . G 4 HOH B 30 330 66 HOH HOH . G 4 HOH B 31 331 35 HOH HOH . G 4 HOH B 32 332 74 HOH HOH . G 4 HOH B 33 333 19 HOH HOH . G 4 HOH B 34 334 51 HOH HOH . G 4 HOH B 35 335 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 3 2.629 2.363 -16.618 1 9.73 ? C ACT 102 A 1 HETATM 2 O O ACT . . . D 3 2.834 1.415 -17.428 1 12.61 ? O ACT 102 A 1 HETATM 3 O OXT ACT . . . D 3 3.397 3.327 -16.306 1 14.07 ? OXT ACT 102 A 1 HETATM 4 C CH3 ACT . . . D 3 1.279 2.39 -15.93 1 9.24 ? CH3 ACT 102 A 1 HETATM 5 H H1 ACT . . . D 3 1.4 2.237 -14.982 1 11.1 ? H1 ACT 102 A 1 HETATM 6 H H2 ACT . . . D 3 0.732 1.668 -16.263 1 11.1 ? H2 ACT 102 A 1 HETATM 7 H H3 ACT . . . D 3 0.822 3.234 -16.068 1 11.1 ? H3 ACT 102 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 562 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #