data_7RIZ # _model_server_result.job_id IXybf0YH_UDeieMDuZEH7g _model_server_result.datetime_utc '2025-07-01 15:41:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7riz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7RIZ # _exptl.entry_id 7RIZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7RIZ _cell.length_a 48.558 _cell.length_b 48.558 _cell.length_c 199.122 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RIZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 15 A GLU 15 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc2 A OD1 ASN 123 A ASN 123 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc3 A OD1 ASN 172 A ASN 172 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc4 A OD1 ASP 229 A ASP 229 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc5 A OG SER 230 A SER 230 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc6 A O LEU 231 A LEU 231 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.818 ? metalc ? metalc7 A OD1 ASN 271 A ASN 271 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc8 A O ILE 272 A ILE 272 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc9 B O1 OCH . A OCH 401 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc10 C CA CA . A CA 402 1_555 E O HOH . A HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc11 D NA NA . A NA 403 1_555 E O HOH . A HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc12 D NA NA . A NA 403 1_555 E O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc13 D NA NA . A NA 403 1_555 E O HOH . A HOH 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7RIZ _atom_sites.fract_transf_matrix[1][1] 0.020594 _atom_sites.fract_transf_matrix[1][2] 0.01189 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02378 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005022 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OCH A 1 401 401 OCH OCH . C 3 CA A 1 402 1 CA CA . D 4 NA A 1 403 1 NA NA . E 5 HOH A 1 501 180 HOH HOH . E 5 HOH A 2 502 122 HOH HOH . E 5 HOH A 3 503 142 HOH HOH . E 5 HOH A 4 504 106 HOH HOH . E 5 HOH A 5 505 134 HOH HOH . E 5 HOH A 6 506 43 HOH HOH . E 5 HOH A 7 507 38 HOH HOH . E 5 HOH A 8 508 21 HOH HOH . E 5 HOH A 9 509 35 HOH HOH . E 5 HOH A 10 510 68 HOH HOH . E 5 HOH A 11 511 187 HOH HOH . E 5 HOH A 12 512 136 HOH HOH . E 5 HOH A 13 513 72 HOH HOH . E 5 HOH A 14 514 143 HOH HOH . E 5 HOH A 15 515 10 HOH HOH . E 5 HOH A 16 516 44 HOH HOH . E 5 HOH A 17 517 32 HOH HOH . E 5 HOH A 18 518 50 HOH HOH . E 5 HOH A 19 519 128 HOH HOH . E 5 HOH A 20 520 93 HOH HOH . E 5 HOH A 21 521 75 HOH HOH . E 5 HOH A 22 522 182 HOH HOH . E 5 HOH A 23 523 147 HOH HOH . E 5 HOH A 24 524 190 HOH HOH . E 5 HOH A 25 525 129 HOH HOH . E 5 HOH A 26 526 79 HOH HOH . E 5 HOH A 27 527 69 HOH HOH . E 5 HOH A 28 528 82 HOH HOH . E 5 HOH A 29 529 101 HOH HOH . E 5 HOH A 30 530 81 HOH HOH . E 5 HOH A 31 531 160 HOH HOH . E 5 HOH A 32 532 71 HOH HOH . E 5 HOH A 33 533 36 HOH HOH . E 5 HOH A 34 534 127 HOH HOH . E 5 HOH A 35 535 22 HOH HOH . E 5 HOH A 36 536 111 HOH HOH . E 5 HOH A 37 537 154 HOH HOH . E 5 HOH A 38 538 175 HOH HOH . E 5 HOH A 39 539 92 HOH HOH . E 5 HOH A 40 540 27 HOH HOH . E 5 HOH A 41 541 40 HOH HOH . E 5 HOH A 42 542 33 HOH HOH . E 5 HOH A 43 543 18 HOH HOH . E 5 HOH A 44 544 29 HOH HOH . E 5 HOH A 45 545 6 HOH HOH . E 5 HOH A 46 546 67 HOH HOH . E 5 HOH A 47 547 197 HOH HOH . E 5 HOH A 48 548 57 HOH HOH . E 5 HOH A 49 549 169 HOH HOH . E 5 HOH A 50 550 170 HOH HOH . E 5 HOH A 51 551 83 HOH HOH . E 5 HOH A 52 552 3 HOH HOH . E 5 HOH A 53 553 15 HOH HOH . E 5 HOH A 54 554 131 HOH HOH . E 5 HOH A 55 555 11 HOH HOH . E 5 HOH A 56 556 95 HOH HOH . E 5 HOH A 57 557 146 HOH HOH . E 5 HOH A 58 558 109 HOH HOH . E 5 HOH A 59 559 26 HOH HOH . E 5 HOH A 60 560 110 HOH HOH . E 5 HOH A 61 561 58 HOH HOH . E 5 HOH A 62 562 39 HOH HOH . E 5 HOH A 63 563 62 HOH HOH . E 5 HOH A 64 564 28 HOH HOH . E 5 HOH A 65 565 138 HOH HOH . E 5 HOH A 66 566 56 HOH HOH . E 5 HOH A 67 567 23 HOH HOH . E 5 HOH A 68 568 156 HOH HOH . E 5 HOH A 69 569 158 HOH HOH . E 5 HOH A 70 570 65 HOH HOH . E 5 HOH A 71 571 152 HOH HOH . E 5 HOH A 72 572 94 HOH HOH . E 5 HOH A 73 573 123 HOH HOH . E 5 HOH A 74 574 64 HOH HOH . E 5 HOH A 75 575 117 HOH HOH . E 5 HOH A 76 576 80 HOH HOH . E 5 HOH A 77 577 49 HOH HOH . E 5 HOH A 78 578 184 HOH HOH . E 5 HOH A 79 579 144 HOH HOH . E 5 HOH A 80 580 100 HOH HOH . E 5 HOH A 81 581 70 HOH HOH . E 5 HOH A 82 582 16 HOH HOH . E 5 HOH A 83 583 198 HOH HOH . E 5 HOH A 84 584 76 HOH HOH . E 5 HOH A 85 585 8 HOH HOH . E 5 HOH A 86 586 194 HOH HOH . E 5 HOH A 87 587 55 HOH HOH . E 5 HOH A 88 588 99 HOH HOH . E 5 HOH A 89 589 63 HOH HOH . E 5 HOH A 90 590 172 HOH HOH . E 5 HOH A 91 591 103 HOH HOH . E 5 HOH A 92 592 9 HOH HOH . E 5 HOH A 93 593 30 HOH HOH . E 5 HOH A 94 594 47 HOH HOH . E 5 HOH A 95 595 46 HOH HOH . E 5 HOH A 96 596 162 HOH HOH . E 5 HOH A 97 597 91 HOH HOH . E 5 HOH A 98 598 1 HOH HOH . E 5 HOH A 99 599 196 HOH HOH . E 5 HOH A 100 600 2 HOH HOH . E 5 HOH A 101 601 188 HOH HOH . E 5 HOH A 102 602 25 HOH HOH . E 5 HOH A 103 603 5 HOH HOH . E 5 HOH A 104 604 105 HOH HOH . E 5 HOH A 105 605 34 HOH HOH . E 5 HOH A 106 606 17 HOH HOH . E 5 HOH A 107 607 14 HOH HOH . E 5 HOH A 108 608 60 HOH HOH . E 5 HOH A 109 609 54 HOH HOH . E 5 HOH A 110 610 61 HOH HOH . E 5 HOH A 111 611 48 HOH HOH . E 5 HOH A 112 612 120 HOH HOH . E 5 HOH A 113 613 7 HOH HOH . E 5 HOH A 114 614 177 HOH HOH . E 5 HOH A 115 615 168 HOH HOH . E 5 HOH A 116 616 19 HOH HOH . E 5 HOH A 117 617 201 HOH HOH . E 5 HOH A 118 618 42 HOH HOH . E 5 HOH A 119 619 151 HOH HOH . E 5 HOH A 120 620 77 HOH HOH . E 5 HOH A 121 621 20 HOH HOH . E 5 HOH A 122 622 108 HOH HOH . E 5 HOH A 123 623 4 HOH HOH . E 5 HOH A 124 624 130 HOH HOH . E 5 HOH A 125 625 185 HOH HOH . E 5 HOH A 126 626 163 HOH HOH . E 5 HOH A 127 627 115 HOH HOH . E 5 HOH A 128 628 85 HOH HOH . E 5 HOH A 129 629 86 HOH HOH . E 5 HOH A 130 630 51 HOH HOH . E 5 HOH A 131 631 59 HOH HOH . E 5 HOH A 132 632 192 HOH HOH . E 5 HOH A 133 633 13 HOH HOH . E 5 HOH A 134 634 102 HOH HOH . E 5 HOH A 135 635 166 HOH HOH . E 5 HOH A 136 636 84 HOH HOH . E 5 HOH A 137 637 179 HOH HOH . E 5 HOH A 138 638 165 HOH HOH . E 5 HOH A 139 639 176 HOH HOH . E 5 HOH A 140 640 37 HOH HOH . E 5 HOH A 141 641 89 HOH HOH . E 5 HOH A 142 642 53 HOH HOH . E 5 HOH A 143 643 133 HOH HOH . E 5 HOH A 144 644 164 HOH HOH . E 5 HOH A 145 645 88 HOH HOH . E 5 HOH A 146 646 174 HOH HOH . E 5 HOH A 147 647 24 HOH HOH . E 5 HOH A 148 648 118 HOH HOH . E 5 HOH A 149 649 73 HOH HOH . E 5 HOH A 150 650 31 HOH HOH . E 5 HOH A 151 651 121 HOH HOH . E 5 HOH A 152 652 96 HOH HOH . E 5 HOH A 153 653 145 HOH HOH . E 5 HOH A 154 654 178 HOH HOH . E 5 HOH A 155 655 209 HOH HOH . E 5 HOH A 156 656 203 HOH HOH . E 5 HOH A 157 657 125 HOH HOH . E 5 HOH A 158 658 153 HOH HOH . E 5 HOH A 159 659 204 HOH HOH . E 5 HOH A 160 660 98 HOH HOH . E 5 HOH A 161 661 186 HOH HOH . E 5 HOH A 162 662 113 HOH HOH . E 5 HOH A 163 663 171 HOH HOH . E 5 HOH A 164 664 66 HOH HOH . E 5 HOH A 165 665 104 HOH HOH . E 5 HOH A 166 666 107 HOH HOH . E 5 HOH A 167 667 148 HOH HOH . E 5 HOH A 168 668 12 HOH HOH . E 5 HOH A 169 669 157 HOH HOH . E 5 HOH A 170 670 200 HOH HOH . E 5 HOH A 171 671 202 HOH HOH . E 5 HOH A 172 672 155 HOH HOH . E 5 HOH A 173 673 124 HOH HOH . E 5 HOH A 174 674 140 HOH HOH . E 5 HOH A 175 675 137 HOH HOH . E 5 HOH A 176 676 161 HOH HOH . E 5 HOH A 177 677 114 HOH HOH . E 5 HOH A 178 678 141 HOH HOH . E 5 HOH A 179 679 189 HOH HOH . E 5 HOH A 180 680 135 HOH HOH . E 5 HOH A 181 681 41 HOH HOH . E 5 HOH A 182 682 159 HOH HOH . E 5 HOH A 183 683 97 HOH HOH . E 5 HOH A 184 684 87 HOH HOH . E 5 HOH A 185 685 191 HOH HOH . E 5 HOH A 186 686 119 HOH HOH . E 5 HOH A 187 687 112 HOH HOH . E 5 HOH A 188 688 78 HOH HOH . E 5 HOH A 189 689 193 HOH HOH . E 5 HOH A 190 690 45 HOH HOH . E 5 HOH A 191 691 206 HOH HOH . E 5 HOH A 192 692 150 HOH HOH . E 5 HOH A 193 693 74 HOH HOH . E 5 HOH A 194 694 52 HOH HOH . E 5 HOH A 195 695 207 HOH HOH . E 5 HOH A 196 696 173 HOH HOH . E 5 HOH A 197 697 181 HOH HOH . E 5 HOH A 198 698 208 HOH HOH . E 5 HOH A 199 699 90 HOH HOH . E 5 HOH A 200 700 132 HOH HOH . E 5 HOH A 201 701 205 HOH HOH . E 5 HOH A 202 702 149 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -15.112 _atom_site.Cartn_y 9.535 _atom_site.Cartn_z 20.177 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 115 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #