data_7RJA
#
_model_server_result.job_id            QkW9rxBINP0dncpYrabIoA 
_model_server_result.datetime_utc      '2024-11-21 14:06:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rja 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"CA","auth_seq_id":301}' 
#
_entry.id    7RJA 
#
_exptl.entry_id    7RJA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          12 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME C' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7RJA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RJA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 12 W N N 
? 12 CA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 F SG CYS 89 H CYS 89 1_555 F SG CYS 111 H CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 O SG CYS 89 R CYS 89 1_555 O SG CYS 111 R CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 B NE2 GLN 22 K GLN 22 1_555 V C3M U10 . K U10 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 B OE1 GLN 43 K GLN 43 1_555 S C1B HEM . K HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? 
covale ? covale3 C SG CYS 82 D CYS 82 1_555 W CAB HEC . D HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.791 ? 
covale ? covale4 C SG CYS 85 D CYS 85 1_555 W CAC HEC . D HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? 
covale ? covale5 K OE1 GLN 43 T GLN 43 1_555 Y C1B HEM . T HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? 
covale ? covale6 L SG CYS 82 N CYS 82 1_555 CA CAB HEC . N HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? 
covale ? covale7 L SG CYS 85 N CYS 85 1_555 CA CAC HEC . N HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? 
metalc ? metalc1 B NE2 HIS 82 K HIS 82 1_555 S FE HEM . K HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? 
metalc ? metalc2 B NE2 HIS 96 K HIS 96 1_555 T FE HEM . K HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc3 B NE2 HIS 183 K HIS 183 1_555 S FE HEM . K HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc4 B NE2 HIS 197 K HIS 197 1_555 T FE HEM . K HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc5 C NE2 HIS 86 D HIS 86 1_555 W FE HEC . D HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc6 H O HIS 158 C HIS 158 1_555 X FE2 FES . C FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc7 K NE2 HIS 82 T HIS 82 1_555 Y FE HEM . T HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? 
metalc ? metalc8 K NE2 HIS 96 T HIS 96 1_555 Z FE HEM . T HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc9 K NE2 HIS 183 T HIS 183 1_555 Y FE HEM . T HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc10 K NE2 HIS 197 T HIS 197 1_555 Z FE HEM . T HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc11 Q O HIS 158 M HIS 158 1_555 DA FE1 FES . M FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? 
metalc ? metalc12 Q O HIS 158 M HIS 158 1_555 DA FE2 FES . M FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7RJA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 10 HEM K 1 401 401 HEM HEM . 
T 10 HEM K 1 402 402 HEM HEM . 
U 11 U10 K 1 403 408 U10 U10 . 
V 11 U10 K 1 404 409 U10 U10 . 
W 12 HEC D 1 301 3 HEC HEC . 
X 13 FES C 1 301 4 FES FES . 
Y 10 HEM T 1 401 401 HEM HEM . 
Z 10 HEM T 1 402 402 HEM HEM . 
AA 11 U10 T 1 403 406 U10 U10 . 
BA 11 U10 T 1 404 407 U10 U10 . 
CA 12 HEC N 1 301 3 HEC HEC . 
DA 13 FES M 1 301 4 FES FES . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEC . . . CA 12 160.925 174.972 87.857 1 108.49 ? FE HEC 301 N 1 
HETATM 2 C CHA HEC . . . CA 12 163.568 173.808 89.666 1 108.49 ? CHA HEC 301 N 1 
HETATM 3 C CHB HEC . . . CA 12 159.699 176.526 90.648 1 108.49 ? CHB HEC 301 N 1 
HETATM 4 C CHC HEC . . . CA 12 158.414 176.385 85.983 1 108.49 ? CHC HEC 301 N 1 
HETATM 5 C CHD HEC . . . CA 12 161.952 173.168 85.151 1 108.49 ? CHD HEC 301 N 1 
HETATM 6 N NA HEC . . . CA 12 161.578 175.223 89.769 1 108.49 ? NA HEC 301 N 1 
HETATM 7 C C1A HEC . . . CA 12 162.585 174.48 90.348 1 108.49 ? C1A HEC 301 N 1 
HETATM 8 C C2A HEC . . . CA 12 162.427 174.538 91.785 1 108.49 ? C2A HEC 301 N 1 
HETATM 9 C C3A HEC . . . CA 12 161.359 175.29 92.046 1 108.49 ? C3A HEC 301 N 1 
HETATM 10 C C4A HEC . . . CA 12 160.807 175.733 90.791 1 108.49 ? C4A HEC 301 N 1 
HETATM 11 C CMA HEC . . . CA 12 160.786 175.643 93.43 1 108.49 ? CMA HEC 301 N 1 
HETATM 12 C CAA HEC . . . CA 12 163.334 173.844 92.82 1 108.49 ? CAA HEC 301 N 1 
HETATM 13 C CBA HEC . . . CA 12 164.336 174.845 93.375 1 108.49 ? CBA HEC 301 N 1 
HETATM 14 C CGA HEC . . . CA 12 165.111 174.188 94.483 1 108.49 ? CGA HEC 301 N 1 
HETATM 15 O O1A HEC . . . CA 12 166.029 174.841 95.042 1 108.49 ? O1A HEC 301 N 1 
HETATM 16 O O2A HEC . . . CA 12 164.809 173.013 94.81 1 108.49 ? O2A HEC 301 N 1 
HETATM 17 N NB HEC . . . CA 12 159.325 176.195 88.241 1 108.49 ? NB HEC 301 N 1 
HETATM 18 C C1B HEC . . . CA 12 159.053 176.772 89.464 1 108.49 ? C1B HEC 301 N 1 
HETATM 19 C C2B HEC . . . CA 12 157.964 177.7 89.295 1 108.49 ? C2B HEC 301 N 1 
HETATM 20 C C3B HEC . . . CA 12 157.592 177.681 88.018 1 108.49 ? C3B HEC 301 N 1 
HETATM 21 C C4B HEC . . . CA 12 158.446 176.729 87.318 1 108.49 ? C4B HEC 301 N 1 
HETATM 22 C CMB HEC . . . CA 12 157.348 178.553 90.422 1 108.49 ? CMB HEC 301 N 1 
HETATM 23 C CAB HEC . . . CA 12 156.446 178.548 87.458 1 108.49 ? CAB HEC 301 N 1 
HETATM 24 C CBB HEC . . . CA 12 156.123 178.534 86.167 1 108.49 ? CBB HEC 301 N 1 
HETATM 25 N NC HEC . . . CA 12 160.235 174.725 85.939 1 108.49 ? NC HEC 301 N 1 
HETATM 26 C C1C HEC . . . CA 12 159.322 175.569 85.34 1 108.49 ? C1C HEC 301 N 1 
HETATM 27 C C2C HEC . . . CA 12 159.478 175.447 83.907 1 108.49 ? C2C HEC 301 N 1 
HETATM 28 C C3C HEC . . . CA 12 160.452 174.568 83.658 1 108.49 ? C3C HEC 301 N 1 
HETATM 29 C C4C HEC . . . CA 12 160.95 174.093 84.939 1 108.49 ? C4C HEC 301 N 1 
HETATM 30 C CMC HEC . . . CA 12 158.653 176.22 82.857 1 108.49 ? CMC HEC 301 N 1 
HETATM 31 C CAC HEC . . . CA 12 160.924 174.159 82.242 1 108.49 ? CAC HEC 301 N 1 
HETATM 32 C CBC HEC . . . CA 12 162.027 173.427 82.049 1 108.49 ? CBC HEC 301 N 1 
HETATM 33 N ND HEC . . . CA 12 162.516 173.774 87.457 1 108.49 ? ND HEC 301 N 1 
HETATM 34 C C1D HEC . . . CA 12 162.668 173.013 86.317 1 108.49 ? C1D HEC 301 N 1 
HETATM 35 C C2D HEC . . . CA 12 163.71 172.037 86.567 1 108.49 ? C2D HEC 301 N 1 
HETATM 36 C C3D HEC . . . CA 12 164.156 172.217 87.812 1 108.49 ? C3D HEC 301 N 1 
HETATM 37 C C4D HEC . . . CA 12 163.414 173.31 88.396 1 108.49 ? C4D HEC 301 N 1 
HETATM 38 C CMD HEC . . . CA 12 164.215 170.976 85.569 1 108.49 ? CMD HEC 301 N 1 
HETATM 39 C CAD HEC . . . CA 12 165.262 171.408 88.524 1 108.49 ? CAD HEC 301 N 1 
HETATM 40 C CBD HEC . . . CA 12 166.457 172.314 88.805 1 108.49 ? CBD HEC 301 N 1 
HETATM 41 C CGD HEC . . . CA 12 167.462 171.581 89.649 1 108.49 ? CGD HEC 301 N 1 
HETATM 42 O O1D HEC . . . CA 12 167.121 170.497 90.187 1 108.49 ? O1D HEC 301 N 1 
HETATM 43 O O2D HEC . . . CA 12 168.603 172.087 89.79 1 108.49 ? O2D HEC 301 N 1 
HETATM 44 H HHA HEC . . . CA 12 164.486 173.96 89.97 1 108.49 ? HHA HEC 301 N 1 
HETATM 45 H HHB HEC . . . CA 12 159.452 177.085 91.413 1 108.49 ? HHB HEC 301 N 1 
HETATM 46 H HHC HEC . . . CA 12 157.55 176.49 85.534 1 108.49 ? HHC HEC 301 N 1 
HETATM 47 H HHD HEC . . . CA 12 162.031 172.448 84.49 1 108.49 ? HHD HEC 301 N 1 
HETATM 48 H HMA1 HEC . . . CA 12 160.708 176.616 93.513 1 108.49 ? HMA1 HEC 301 N 1 
HETATM 49 H HMA2 HEC . . . CA 12 161.381 175.3 94.13 1 108.49 ? HMA2 HEC 301 N 1 
HETATM 50 H HMA3 HEC . . . CA 12 159.899 175.237 93.522 1 108.49 ? HMA3 HEC 301 N 1 
HETATM 51 H HAA1 HEC . . . CA 12 163.808 173.114 92.395 1 108.49 ? HAA1 HEC 301 N 1 
HETATM 52 H HAA2 HEC . . . CA 12 162.787 173.497 93.543 1 108.49 ? HAA2 HEC 301 N 1 
HETATM 53 H HBA1 HEC . . . CA 12 163.865 175.62 93.721 1 108.49 ? HBA1 HEC 301 N 1 
HETATM 54 H HBA2 HEC . . . CA 12 164.943 175.121 92.672 1 108.49 ? HBA2 HEC 301 N 1 
HETATM 55 H HMB1 HEC . . . CA 12 156.849 179.293 90.044 1 108.49 ? HMB1 HEC 301 N 1 
HETATM 56 H HMB2 HEC . . . CA 12 158.058 178.897 90.986 1 108.49 ? HMB2 HEC 301 N 1 
HETATM 57 H HMB3 HEC . . . CA 12 156.758 178 90.958 1 108.49 ? HMB3 HEC 301 N 1 
HETATM 58 H HAB HEC . . . CA 12 155.894 179.045 88.067 1 108.49 ? HAB HEC 301 N 1 
HETATM 59 H HBB1 HEC . . . CA 12 155.19 178.471 85.925 1 108.49 ? HBB1 HEC 301 N 1 
HETATM 60 H HBB2 HEC . . . CA 12 156.801 178.367 85.497 1 108.49 ? HBB2 HEC 301 N 1 
HETATM 61 H HMC1 HEC . . . CA 12 159.034 176.09 81.975 1 108.49 ? HMC1 HEC 301 N 1 
HETATM 62 H HMC2 HEC . . . CA 12 158.663 177.164 83.074 1 108.49 ? HMC2 HEC 301 N 1 
HETATM 63 H HMC3 HEC . . . CA 12 157.738 175.897 82.866 1 108.49 ? HMC3 HEC 301 N 1 
HETATM 64 H HAC HEC . . . CA 12 160.479 174.527 81.475 1 108.49 ? HAC HEC 301 N 1 
HETATM 65 H HBC1 HEC . . . CA 12 162.163 172.98 81.199 1 108.49 ? HBC1 HEC 301 N 1 
HETATM 66 H HBC2 HEC . . . CA 12 162.731 173.416 82.714 1 108.49 ? HBC2 HEC 301 N 1 
HETATM 67 H HMD1 HEC . . . CA 12 165.179 170.853 85.686 1 108.49 ? HMD1 HEC 301 N 1 
HETATM 68 H HMD2 HEC . . . CA 12 164.033 171.276 84.654 1 108.49 ? HMD2 HEC 301 N 1 
HETATM 69 H HMD3 HEC . . . CA 12 163.754 170.127 85.73 1 108.49 ? HMD3 HEC 301 N 1 
HETATM 70 H HAD1 HEC . . . CA 12 165.541 170.67 87.959 1 108.49 ? HAD1 HEC 301 N 1 
HETATM 71 H HAD2 HEC . . . CA 12 164.916 171.061 89.361 1 108.49 ? HAD2 HEC 301 N 1 
HETATM 72 H HBD1 HEC . . . CA 12 166.164 173.108 89.275 1 108.49 ? HBD1 HEC 301 N 1 
HETATM 73 H HBD2 HEC . . . CA 12 166.872 172.571 87.967 1 108.49 ? HBD2 HEC 301 N 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    195 
_model_server_stats.query_time_ms           430 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           73 
#