data_7RJB
#
_model_server_result.job_id            ZT-TQfPl6Wmuk8hvai15Ig 
_model_server_result.datetime_utc      '2024-11-19 12:34:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rjb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":401}' 
#
_entry.id    7RJB 
#
_exptl.entry_id    7RJB 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 10 K N N 
? 10 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 F SG CYS 89 H CYS 89 1_555 F SG CYS 111 H CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 B NE2 GLN 22 K GLN 22 1_555 N C3M U10 . K U10 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 B OE1 GLN 43 K GLN 43 1_555 K C1B HEM . K HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? 
covale ? covale3 C SG CYS 82 D CYS 82 1_555 O CAB HEC . D HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.714 ? 
covale ? covale4 C SG CYS 85 D CYS 85 1_555 O CAC HEC . D HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.742 ? 
covale ? covale5 C SG CYS 85 D CYS 85 1_555 O CBC HEC . D HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? 
metalc ? metalc1 B NE2 HIS 82 K HIS 82 1_555 K FE HEM . K HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? 
metalc ? metalc2 B NE2 HIS 96 K HIS 96 1_555 L FE HEM . K HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc3 B NE2 HIS 183 K HIS 183 1_555 K FE HEM . K HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc4 B NE2 HIS 197 K HIS 197 1_555 L FE HEM . K HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc5 C NE2 HIS 86 D HIS 86 1_555 O FE HEC . D HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc6 J O LEU 159 E LEU 159 1_555 P FE1 FES . E FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
_atom_sites.entry_id                     7RJB 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 10 HEM K 1 401 401 HEM HEM . 
L 10 HEM K 1 402 402 HEM HEM . 
M 11 U10 K 1 403 408 U10 U10 . 
N 11 U10 K 1 404 409 U10 U10 . 
O 12 HEC D 1 301 503 HEC HEC . 
P 13 FES E 1 301 4 FES FES . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . K 10 142.989 138.539 113.473 1 74.17 ? CHA HEM 401 K 1 
HETATM 2 C CHB HEM . . . K 10 141.45 137.29 117.899 1 74.17 ? CHB HEM 401 K 1 
HETATM 3 C CHC HEM . . . K 10 144.433 140.562 119.825 1 74.17 ? CHC HEM 401 K 1 
HETATM 4 C CHD HEM . . . K 10 146.435 141.23 115.473 1 74.17 ? CHD HEM 401 K 1 
HETATM 5 C C1A HEM . . . K 10 142.332 137.909 114.498 1 74.17 ? C1A HEM 401 K 1 
HETATM 6 C C2A HEM . . . K 10 141.376 136.84 114.352 1 74.17 ? C2A HEM 401 K 1 
HETATM 7 C C3A HEM . . . K 10 140.949 136.495 115.561 1 74.17 ? C3A HEM 401 K 1 
HETATM 8 C C4A HEM . . . K 10 141.616 137.335 116.532 1 74.17 ? C4A HEM 401 K 1 
HETATM 9 C CMA HEM . . . K 10 139.922 135.385 115.859 1 74.17 ? CMA HEM 401 K 1 
HETATM 10 C CAA HEM . . . K 10 140.933 136.193 113.027 1 74.17 ? CAA HEM 401 K 1 
HETATM 11 C CBA HEM . . . K 10 142.165 135.8 112.222 1 74.17 ? CBA HEM 401 K 1 
HETATM 12 C CGA HEM . . . K 10 141.807 134.772 111.187 1 74.17 ? CGA HEM 401 K 1 
HETATM 13 O O1A HEM . . . K 10 140.667 134.244 111.22 1 74.17 ? O1A HEM 401 K 1 
HETATM 14 O O2A HEM . . . K 10 142.67 134.481 110.324 1 74.17 ? O2A HEM 401 K 1 
HETATM 15 C C1B HEM . . . K 10 142.083 138.101 118.813 1 74.17 ? C1B HEM 401 K 1 
HETATM 16 C C2B HEM . . . K 10 141.764 138.22 120.215 1 74.17 ? C2B HEM 401 K 1 
HETATM 17 C C3B HEM . . . K 10 142.583 139.133 120.747 1 74.17 ? C3B HEM 401 K 1 
HETATM 18 C C4B HEM . . . K 10 143.446 139.617 119.692 1 74.17 ? C4B HEM 401 K 1 
HETATM 19 C CMB HEM . . . K 10 140.658 137.406 120.92 1 74.17 ? CMB HEM 401 K 1 
HETATM 20 C CAB HEM . . . K 10 142.672 139.607 122.212 1 74.17 ? CAB HEM 401 K 1 
HETATM 21 C CBB HEM . . . K 10 142.1 138.923 123.207 1 74.17 ? CBB HEM 401 K 1 
HETATM 22 C C1C HEM . . . K 10 145.261 140.998 118.82 1 74.17 ? C1C HEM 401 K 1 
HETATM 23 C C2C HEM . . . K 10 146.391 141.886 118.973 1 74.17 ? C2C HEM 401 K 1 
HETATM 24 C C3C HEM . . . K 10 146.934 142.071 117.782 1 74.17 ? C3C HEM 401 K 1 
HETATM 25 C C4C HEM . . . K 10 146.181 141.305 116.818 1 74.17 ? C4C HEM 401 K 1 
HETATM 26 C CMC HEM . . . K 10 146.891 142.527 120.279 1 74.17 ? CMC HEM 401 K 1 
HETATM 27 C CAC HEM . . . K 10 148.165 142.946 117.511 1 74.17 ? CAC HEM 401 K 1 
HETATM 28 C CBC HEM . . . K 10 148.64 143.053 116.273 1 74.17 ? CBC HEM 401 K 1 
HETATM 29 C C1D HEM . . . K 10 145.648 140.597 114.56 1 74.17 ? C1D HEM 401 K 1 
HETATM 30 C C2D HEM . . . K 10 145.842 140.657 113.134 1 74.17 ? C2D HEM 401 K 1 
HETATM 31 C C3D HEM . . . K 10 144.902 139.915 112.568 1 74.17 ? C3D HEM 401 K 1 
HETATM 32 C C4D HEM . . . K 10 144.073 139.365 113.623 1 74.17 ? C4D HEM 401 K 1 
HETATM 33 C CMD HEM . . . K 10 146.961 141.444 112.426 1 74.17 ? CMD HEM 401 K 1 
HETATM 34 C CAD HEM . . . K 10 144.732 139.694 111.055 1 74.17 ? CAD HEM 401 K 1 
HETATM 35 C CBD HEM . . . K 10 144.596 138.2 110.801 1 74.17 ? CBD HEM 401 K 1 
HETATM 36 C CGD HEM . . . K 10 145.51 137.758 109.696 1 74.17 ? CGD HEM 401 K 1 
HETATM 37 O O1D HEM . . . K 10 145.638 136.526 109.514 1 74.17 ? O1D HEM 401 K 1 
HETATM 38 O O2D HEM . . . K 10 146.11 138.613 109.002 1 74.17 ? O2D HEM 401 K 1 
HETATM 39 N NA HEM . . . K 10 142.454 138.189 115.844 1 74.17 ? NA HEM 401 K 1 
HETATM 40 N NB HEM . . . K 10 143.104 138.976 118.524 1 74.17 ? NB HEM 401 K 1 
HETATM 41 N NC HEM . . . K 10 145.163 140.66 117.487 1 74.17 ? NC HEM 401 K 1 
HETATM 42 N ND HEM . . . K 10 144.563 139.799 114.834 1 74.17 ? ND HEM 401 K 1 
HETATM 43 FE FE HEM . . . K 10 143.92 139.276 116.704 1 74.17 ? FE HEM 401 K 1 
HETATM 44 H HHB HEM . . . K 10 140.741 136.705 118.241 1 74.17 ? HHB HEM 401 K 1 
HETATM 45 H HHC HEM . . . K 10 144.587 140.925 120.722 1 74.17 ? HHC HEM 401 K 1 
HETATM 46 H HHD HEM . . . K 10 147.377 141.294 115.218 1 74.17 ? HHD HEM 401 K 1 
HETATM 47 H HMA HEM . . . K 10 139.159 135.48 115.252 1 74.17 ? HMA HEM 401 K 1 
HETATM 48 H HMAA HEM . . . K 10 139.61 135.468 116.784 1 74.17 ? HMAA HEM 401 K 1 
HETATM 49 H HMAB HEM . . . K 10 140.337 134.508 115.725 1 74.17 ? HMAB HEM 401 K 1 
HETATM 50 H HAA HEM . . . K 10 140.42 136.832 112.521 1 74.17 ? HAA HEM 401 K 1 
HETATM 51 H HAAA HEM . . . K 10 140.392 135.41 113.212 1 74.17 ? HAAA HEM 401 K 1 
HETATM 52 H HBA HEM . . . K 10 142.84 135.439 112.817 1 74.17 ? HBA HEM 401 K 1 
HETATM 53 H HBAA HEM . . . K 10 142.517 136.583 111.773 1 74.17 ? HBAA HEM 401 K 1 
HETATM 54 H HMB HEM . . . K 10 139.986 137.151 120.27 1 74.17 ? HMB HEM 401 K 1 
HETATM 55 H HMBA HEM . . . K 10 140.242 137.945 121.612 1 74.17 ? HMBA HEM 401 K 1 
HETATM 56 H HMBB HEM . . . K 10 141.044 136.607 121.313 1 74.17 ? HMBB HEM 401 K 1 
HETATM 57 H HAB HEM . . . K 10 143.139 140.422 122.413 1 74.17 ? HAB HEM 401 K 1 
HETATM 58 H HBB HEM . . . K 10 141.909 139.365 124.047 1 74.17 ? HBB HEM 401 K 1 
HETATM 59 H HBBA HEM . . . K 10 141.937 137.973 123.116 1 74.17 ? HBBA HEM 401 K 1 
HETATM 60 H HMC HEM . . . K 10 147.861 142.508 120.299 1 74.17 ? HMC HEM 401 K 1 
HETATM 61 H HMCA HEM . . . K 10 146.542 142.03 121.035 1 74.17 ? HMCA HEM 401 K 1 
HETATM 62 H HMCB HEM . . . K 10 146.585 143.446 120.329 1 74.17 ? HMCB HEM 401 K 1 
HETATM 63 H HAC HEM . . . K 10 148.66 143.317 118.246 1 74.17 ? HAC HEM 401 K 1 
HETATM 64 H HBC HEM . . . K 10 149.593 143.001 116.112 1 74.17 ? HBC HEM 401 K 1 
HETATM 65 H HBCA HEM . . . K 10 148.039 143.238 115.535 1 74.17 ? HBCA HEM 401 K 1 
HETATM 66 H HMD HEM . . . K 10 147.004 142.349 112.801 1 74.17 ? HMD HEM 401 K 1 
HETATM 67 H HMDA HEM . . . K 10 146.78 141.503 111.466 1 74.17 ? HMDA HEM 401 K 1 
HETATM 68 H HMDB HEM . . . K 10 147.819 140.995 112.573 1 74.17 ? HMDB HEM 401 K 1 
HETATM 69 H HAD HEM . . . K 10 145.502 140.048 110.589 1 74.17 ? HAD HEM 401 K 1 
HETATM 70 H HADA HEM . . . K 10 143.933 140.149 110.75 1 74.17 ? HADA HEM 401 K 1 
HETATM 71 H HBD HEM . . . K 10 143.68 138.006 110.549 1 74.17 ? HBD HEM 401 K 1 
HETATM 72 H HBDA HEM . . . K 10 144.818 137.711 111.607 1 74.17 ? HBDA HEM 401 K 1 
HETATM 73 H HHA HEM . . . K 10 142.536 138.558 112.604 1 74.17 ? HHA HEM 401 K 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    89 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           73 
#