data_7RKR # _model_server_result.job_id 6E9zOVz9pf0ys7CTgOyzeA _model_server_result.datetime_utc '2024-10-13 03:27:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rkr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7RKR # _exptl.entry_id 7RKR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 378.32 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S)-1-(4-fluorophenyl)-2-(1H-imidazol-1-yl)ethyl 3-(trifluoromethyl)benzoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.12 _cell.angle_gamma 90 _cell.entry_id 7RKR _cell.length_a 120.86 _cell.length_b 55.35 _cell.length_c 71.49 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RKR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 27 A SER 52 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.882 ? metalc ? metalc2 A O LEU 59 A LEU 84 1_555 E CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? metalc ? metalc3 A SG CYS 405 A CYS 430 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc4 B FE HEM . A HEM 501 1_555 C N1 L49 . A L49 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? # _chem_comp.formula 'C19 H14 F4 N2 O2' _chem_comp.formula_weight 378.32 _chem_comp.id L49 _chem_comp.mon_nstd_flag . _chem_comp.name '(1S)-1-(4-fluorophenyl)-2-(1H-imidazol-1-yl)ethyl 3-(trifluoromethyl)benzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C6 L49 doub 255 n y C7 C8 L49 sing 256 n y F C6 L49 sing 257 n n C6 C5 L49 sing 258 n y C8 C3 L49 doub 259 n y C5 C4 L49 doub 260 n y C3 C4 L49 sing 261 n y C3 C2 L49 sing 262 n n C2 C9 L49 sing 263 n n C2 O1 L49 sing 264 n n O C1 L49 doub 265 n n C9 N L49 sing 266 n n O1 C1 L49 sing 267 n n C1 C L49 sing 268 n n C10 N L49 sing 269 n y C10 C11 L49 doub 270 n y N C12 L49 sing 271 n y C C13 L49 doub 272 n y C C18 L49 sing 273 n y C11 N1 L49 sing 274 n y C13 C14 L49 sing 275 n y C12 N1 L49 doub 276 n y C18 C17 L49 doub 277 n y F3 C15 L49 sing 278 n n C14 C15 L49 sing 279 n n C14 C16 L49 doub 280 n y F1 C15 L49 sing 281 n n C15 F2 L49 sing 282 n n C17 C16 L49 sing 283 n y C13 H1 L49 sing 284 n n C16 H2 L49 sing 285 n n C17 H3 L49 sing 286 n n C18 H4 L49 sing 287 n n C2 H5 L49 sing 288 n n C9 H6 L49 sing 289 n n C9 H7 L49 sing 290 n n C12 H8 L49 sing 291 n n C11 H9 L49 sing 292 n n C10 H10 L49 sing 293 n n C8 H11 L49 sing 294 n n C7 H12 L49 sing 295 n n C5 H13 L49 sing 296 n n C4 H14 L49 sing 297 n n # _atom_sites.entry_id 7RKR _atom_sites.fract_transf_matrix[1][1] 0.008274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001477 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014209 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 501 HEM HEM . C 3 L49 A 1 502 502 L49 L49 . D 4 CA A 1 503 508 CA CA . E 4 CA A 1 504 509 CA CA . F 5 HOH A 1 601 53 HOH HOH . F 5 HOH A 2 602 60 HOH HOH . F 5 HOH A 3 603 14 HOH HOH . F 5 HOH A 4 604 44 HOH HOH . F 5 HOH A 5 605 66 HOH HOH . F 5 HOH A 6 606 88 HOH HOH . F 5 HOH A 7 607 33 HOH HOH . F 5 HOH A 8 608 91 HOH HOH . F 5 HOH A 9 609 27 HOH HOH . F 5 HOH A 10 610 15 HOH HOH . F 5 HOH A 11 611 78 HOH HOH . F 5 HOH A 12 612 41 HOH HOH . F 5 HOH A 13 613 9 HOH HOH . F 5 HOH A 14 614 29 HOH HOH . F 5 HOH A 15 615 36 HOH HOH . F 5 HOH A 16 616 85 HOH HOH . F 5 HOH A 17 617 64 HOH HOH . F 5 HOH A 18 618 48 HOH HOH . F 5 HOH A 19 619 39 HOH HOH . F 5 HOH A 20 620 71 HOH HOH . F 5 HOH A 21 621 6 HOH HOH . F 5 HOH A 22 622 67 HOH HOH . F 5 HOH A 23 623 65 HOH HOH . F 5 HOH A 24 624 22 HOH HOH . F 5 HOH A 25 625 54 HOH HOH . F 5 HOH A 26 626 4 HOH HOH . F 5 HOH A 27 627 26 HOH HOH . F 5 HOH A 28 628 25 HOH HOH . F 5 HOH A 29 629 18 HOH HOH . F 5 HOH A 30 630 8 HOH HOH . F 5 HOH A 31 631 47 HOH HOH . F 5 HOH A 32 632 105 HOH HOH . F 5 HOH A 33 633 51 HOH HOH . F 5 HOH A 34 634 16 HOH HOH . F 5 HOH A 35 635 12 HOH HOH . F 5 HOH A 36 636 84 HOH HOH . F 5 HOH A 37 637 83 HOH HOH . F 5 HOH A 38 638 38 HOH HOH . F 5 HOH A 39 639 73 HOH HOH . F 5 HOH A 40 640 2 HOH HOH . F 5 HOH A 41 641 76 HOH HOH . F 5 HOH A 42 642 43 HOH HOH . F 5 HOH A 43 643 86 HOH HOH . F 5 HOH A 44 644 23 HOH HOH . F 5 HOH A 45 645 19 HOH HOH . F 5 HOH A 46 646 96 HOH HOH . F 5 HOH A 47 647 1 HOH HOH . F 5 HOH A 48 648 32 HOH HOH . F 5 HOH A 49 649 49 HOH HOH . F 5 HOH A 50 650 70 HOH HOH . F 5 HOH A 51 651 79 HOH HOH . F 5 HOH A 52 652 3 HOH HOH . F 5 HOH A 53 653 11 HOH HOH . F 5 HOH A 54 654 72 HOH HOH . F 5 HOH A 55 655 80 HOH HOH . F 5 HOH A 56 656 21 HOH HOH . F 5 HOH A 57 657 24 HOH HOH . F 5 HOH A 58 658 97 HOH HOH . F 5 HOH A 59 659 101 HOH HOH . F 5 HOH A 60 660 31 HOH HOH . F 5 HOH A 61 661 74 HOH HOH . F 5 HOH A 62 662 10 HOH HOH . F 5 HOH A 63 663 81 HOH HOH . F 5 HOH A 64 664 50 HOH HOH . F 5 HOH A 65 665 57 HOH HOH . F 5 HOH A 66 666 35 HOH HOH . F 5 HOH A 67 667 37 HOH HOH . F 5 HOH A 68 668 5 HOH HOH . F 5 HOH A 69 669 28 HOH HOH . F 5 HOH A 70 670 104 HOH HOH . F 5 HOH A 71 671 7 HOH HOH . F 5 HOH A 72 672 87 HOH HOH . F 5 HOH A 73 673 82 HOH HOH . F 5 HOH A 74 674 75 HOH HOH . F 5 HOH A 75 675 52 HOH HOH . F 5 HOH A 76 676 34 HOH HOH . F 5 HOH A 77 677 45 HOH HOH . F 5 HOH A 78 678 42 HOH HOH . F 5 HOH A 79 679 92 HOH HOH . F 5 HOH A 80 680 77 HOH HOH . F 5 HOH A 81 681 40 HOH HOH . F 5 HOH A 82 682 46 HOH HOH . F 5 HOH A 83 683 89 HOH HOH . F 5 HOH A 84 684 90 HOH HOH . F 5 HOH A 85 685 100 HOH HOH . F 5 HOH A 86 686 61 HOH HOH . F 5 HOH A 87 687 55 HOH HOH . F 5 HOH A 88 688 59 HOH HOH . F 5 HOH A 89 689 94 HOH HOH . F 5 HOH A 90 690 95 HOH HOH . F 5 HOH A 91 691 56 HOH HOH . F 5 HOH A 92 692 98 HOH HOH . F 5 HOH A 93 693 103 HOH HOH . F 5 HOH A 94 694 102 HOH HOH . F 5 HOH A 95 695 99 HOH HOH . F 5 HOH A 96 696 63 HOH HOH . F 5 HOH A 97 697 58 HOH HOH . F 5 HOH A 98 698 30 HOH HOH . F 5 HOH A 99 699 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F3 L49 . . . C 3 24.71 -8.521 20.563 1 40.9 ? F3 L49 502 A 1 HETATM 2 C C15 L49 . . . C 3 24.072 -9.386 21.276 1 41.63 ? C15 L49 502 A 1 HETATM 3 F F1 L49 . . . C 3 24.567 -10.562 21.022 1 46.02 ? F1 L49 502 A 1 HETATM 4 F F2 L49 . . . C 3 24.286 -9.147 22.549 1 45.71 ? F2 L49 502 A 1 HETATM 5 C C14 L49 . . . C 3 22.594 -9.314 20.96 1 32.57 ? C14 L49 502 A 1 HETATM 6 C C13 L49 . . . C 3 22.121 -8.46 19.957 1 28.07 ? C13 L49 502 A 1 HETATM 7 C C16 L49 . . . C 3 21.768 -10.12 21.718 1 32.79 ? C16 L49 502 A 1 HETATM 8 C C17 L49 . . . C 3 20.381 -10.111 21.487 1 31.66 ? C17 L49 502 A 1 HETATM 9 C C18 L49 . . . C 3 19.892 -9.23 20.517 1 32.17 ? C18 L49 502 A 1 HETATM 10 C C L49 . . . C 3 20.741 -8.437 19.749 1 33.91 ? C L49 502 A 1 HETATM 11 C C1 L49 . . . C 3 20.154 -7.584 18.68 1 35.04 ? C1 L49 502 A 1 HETATM 12 O O L49 . . . C 3 20.795 -6.983 17.886 1 36.32 ? O L49 502 A 1 HETATM 13 O O1 L49 . . . C 3 18.76 -7.519 18.608 1 36.75 ? O1 L49 502 A 1 HETATM 14 C C2 L49 . . . C 3 18.108 -6.777 17.61 1 36.3 ? C2 L49 502 A 1 HETATM 15 C C9 L49 . . . C 3 17.171 -5.803 18.293 1 32.3 ? C9 L49 502 A 1 HETATM 16 N N L49 . . . C 3 17.854 -4.826 19.164 1 32.17 ? N L49 502 A 1 HETATM 17 C C12 L49 . . . C 3 17.805 -4.754 20.477 1 29.34 ? C12 L49 502 A 1 HETATM 18 N N1 L49 . . . C 3 18.474 -3.658 20.945 1 30.14 ? N1 L49 502 A 1 HETATM 19 C C11 L49 . . . C 3 19.026 -3.078 19.848 1 32.28 ? C11 L49 502 A 1 HETATM 20 C C10 L49 . . . C 3 18.624 -3.785 18.722 1 32.13 ? C10 L49 502 A 1 HETATM 21 C C3 L49 . . . C 3 17.288 -7.742 16.815 1 38.35 ? C3 L49 502 A 1 HETATM 22 C C8 L49 . . . C 3 17.343 -7.775 15.418 1 42.26 ? C8 L49 502 A 1 HETATM 23 C C7 L49 . . . C 3 16.575 -8.657 14.651 1 40.15 ? C7 L49 502 A 1 HETATM 24 C C6 L49 . . . C 3 15.774 -9.556 15.359 1 42.44 ? C6 L49 502 A 1 HETATM 25 F F L49 . . . C 3 14.977 -10.435 14.758 1 45.28 ? F L49 502 A 1 HETATM 26 C C5 L49 . . . C 3 15.736 -9.527 16.754 1 42.12 ? C5 L49 502 A 1 HETATM 27 C C4 L49 . . . C 3 16.496 -8.668 17.469 1 40.15 ? C4 L49 502 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #