data_7RKW # _model_server_result.job_id EEiW9EXDulqSHCjcCRsp2w _model_server_result.datetime_utc '2024-10-13 03:24:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rkw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7RKW # _exptl.entry_id 7RKW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.212 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S)-1-(4-fluorophenyl)-2-(1H-imidazol-1-yl)ethyl 3,5-dichlorobenzoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.14 _cell.angle_gamma 90 _cell.entry_id 7RKW _cell.length_a 121.29 _cell.length_b 55.28 _cell.length_c 72.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 405 A CYS 405 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc2 B FE HEM . A HEM 501 1_555 C N2 5TV . A 5TV 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C18 H13 Cl2 F N2 O2' _chem_comp.formula_weight 379.212 _chem_comp.id 5TV _chem_comp.mon_nstd_flag . _chem_comp.name '(1S)-1-(4-fluorophenyl)-2-(1H-imidazol-1-yl)ethyl 3,5-dichlorobenzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CD1 CG 5TV doub 1 n y CD1 CE1 5TV sing 2 n y F1 CG 5TV sing 3 n n CG CD2 5TV sing 4 n y CE1 C4 5TV doub 5 n y CD2 CE2 5TV doub 6 n y C4 CE2 5TV sing 7 n y C4 C 5TV sing 8 n n OH C8 5TV doub 9 n n C CA 5TV sing 10 n n C O 5TV sing 11 n n CA N 5TV sing 12 n n C8 O 5TV sing 13 n n C8 C9 5TV sing 14 n n C18 N 5TV sing 15 n y C18 C17 5TV doub 16 n y N C16 5TV sing 17 n y C9 C14 5TV doub 18 n y C9 C10 5TV sing 19 n y C17 N2 5TV sing 20 n y C14 C13 5TV sing 21 n y C10 C11 5TV doub 22 n y C16 N2 5TV doub 23 n y C13 CL2 5TV sing 24 n n C13 C12 5TV doub 25 n y C11 C12 5TV sing 26 n y C11 CL1 5TV sing 27 n n CD1 H1 5TV sing 28 n n CE1 H2 5TV sing 29 n n CE2 H3 5TV sing 30 n n CD2 H4 5TV sing 31 n n C H5 5TV sing 32 n n C10 H6 5TV sing 33 n n C12 H7 5TV sing 34 n n C14 H8 5TV sing 35 n n CA H9 5TV sing 36 n n CA H10 5TV sing 37 n n C16 H11 5TV sing 38 n n C17 H12 5TV sing 39 n n C18 H13 5TV sing 40 n n # _atom_sites.entry_id 7RKW _atom_sites.fract_transf_matrix[1][1] 0.008245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001474 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01809 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 501 HEM HEM . C 3 5TV A 1 502 502 5TV L46 . D 4 GOL A 1 503 1 GOL GOL . E 5 HOH A 1 601 60 HOH HOH . E 5 HOH A 2 602 215 HOH HOH . E 5 HOH A 3 603 184 HOH HOH . E 5 HOH A 4 604 62 HOH HOH . E 5 HOH A 5 605 15 HOH HOH . E 5 HOH A 6 606 110 HOH HOH . E 5 HOH A 7 607 216 HOH HOH . E 5 HOH A 8 608 26 HOH HOH . E 5 HOH A 9 609 46 HOH HOH . E 5 HOH A 10 610 209 HOH HOH . E 5 HOH A 11 611 12 HOH HOH . E 5 HOH A 12 612 4 HOH HOH . E 5 HOH A 13 613 23 HOH HOH . E 5 HOH A 14 614 7 HOH HOH . E 5 HOH A 15 615 22 HOH HOH . E 5 HOH A 16 616 30 HOH HOH . E 5 HOH A 17 617 190 HOH HOH . E 5 HOH A 18 618 191 HOH HOH . E 5 HOH A 19 619 87 HOH HOH . E 5 HOH A 20 620 45 HOH HOH . E 5 HOH A 21 621 2 HOH HOH . E 5 HOH A 22 622 183 HOH HOH . E 5 HOH A 23 623 49 HOH HOH . E 5 HOH A 24 624 54 HOH HOH . E 5 HOH A 25 625 208 HOH HOH . E 5 HOH A 26 626 203 HOH HOH . E 5 HOH A 27 627 50 HOH HOH . E 5 HOH A 28 628 5 HOH HOH . E 5 HOH A 29 629 38 HOH HOH . E 5 HOH A 30 630 90 HOH HOH . E 5 HOH A 31 631 61 HOH HOH . E 5 HOH A 32 632 69 HOH HOH . E 5 HOH A 33 633 196 HOH HOH . E 5 HOH A 34 634 55 HOH HOH . E 5 HOH A 35 635 8 HOH HOH . E 5 HOH A 36 636 1 HOH HOH . E 5 HOH A 37 637 10 HOH HOH . E 5 HOH A 38 638 187 HOH HOH . E 5 HOH A 39 639 70 HOH HOH . E 5 HOH A 40 640 77 HOH HOH . E 5 HOH A 41 641 181 HOH HOH . E 5 HOH A 42 642 17 HOH HOH . E 5 HOH A 43 643 189 HOH HOH . E 5 HOH A 44 644 182 HOH HOH . E 5 HOH A 45 645 193 HOH HOH . E 5 HOH A 46 646 48 HOH HOH . E 5 HOH A 47 647 200 HOH HOH . E 5 HOH A 48 648 42 HOH HOH . E 5 HOH A 49 649 14 HOH HOH . E 5 HOH A 50 650 186 HOH HOH . E 5 HOH A 51 651 195 HOH HOH . E 5 HOH A 52 652 197 HOH HOH . E 5 HOH A 53 653 219 HOH HOH . E 5 HOH A 54 654 202 HOH HOH . E 5 HOH A 55 655 217 HOH HOH . E 5 HOH A 56 656 198 HOH HOH . E 5 HOH A 57 657 188 HOH HOH . E 5 HOH A 58 658 180 HOH HOH . E 5 HOH A 59 659 207 HOH HOH . E 5 HOH A 60 660 220 HOH HOH . E 5 HOH A 61 661 192 HOH HOH . E 5 HOH A 62 662 185 HOH HOH . E 5 HOH A 63 663 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 5TV . . . C 3 17.541 -7.528 16.7 1 48.43 ? C4 5TV 502 A 1 HETATM 2 C C8 5TV . . . C 3 20.311 -7.494 18.478 1 42.06 ? C8 5TV 502 A 1 HETATM 3 F F1 5TV . . . C 3 15.095 -10.075 14.685 1 64.24 ? F1 5TV 502 A 1 HETATM 4 C CG 5TV . . . C 3 15.928 -9.189 15.241 1 59.37 ? CG 5TV 502 A 1 HETATM 5 C CD1 5TV . . . C 3 16.505 -8.124 14.592 1 55.02 ? CD1 5TV 502 A 1 HETATM 6 C CE1 5TV . . . C 3 17.338 -7.302 15.343 1 53.9 ? CE1 5TV 502 A 1 HETATM 7 C CE2 5TV . . . C 3 16.879 -8.59 17.293 1 44.38 ? CE2 5TV 502 A 1 HETATM 8 C CD2 5TV . . . C 3 16.091 -9.427 16.575 1 60.25 ? CD2 5TV 502 A 1 HETATM 9 C C 5TV . . . C 3 18.373 -6.684 17.645 1 43.31 ? C 5TV 502 A 1 HETATM 10 O O 5TV . . . C 3 18.963 -7.445 18.506 1 44.81 ? O 5TV 502 A 1 HETATM 11 O OH 5TV . . . C 3 20.963 -6.923 17.633 1 44.74 ? OH 5TV 502 A 1 HETATM 12 C C9 5TV . . . C 3 20.899 -8.359 19.523 1 45.89 ? C9 5TV 502 A 1 HETATM 13 C C10 5TV . . . C 3 20.123 -9.201 20.289 1 47.95 ? C10 5TV 502 A 1 HETATM 14 C C11 5TV . . . C 3 20.726 -10.045 21.215 1 48.4 ? C11 5TV 502 A 1 HETATM 15 CL CL1 5TV . . . C 3 19.759 -11.082 22.204 1 53.29 ? CL1 5TV 502 A 1 HETATM 16 C C12 5TV . . . C 3 22.08 -10.035 21.453 1 42.64 ? C12 5TV 502 A 1 HETATM 17 C C13 5TV . . . C 3 22.817 -9.172 20.719 1 46.98 ? C13 5TV 502 A 1 HETATM 18 C C14 5TV . . . C 3 22.257 -8.362 19.753 1 39.91 ? C14 5TV 502 A 1 HETATM 19 CL CL2 5TV . . . C 3 24.522 -9.185 20.966 1 50.18 ? CL2 5TV 502 A 1 HETATM 20 C CA 5TV . . . C 3 17.376 -5.667 18.182 1 40.87 ? CA 5TV 502 A 1 HETATM 21 N N 5TV . . . C 3 18.106 -4.655 19.004 1 41.2 ? N 5TV 502 A 1 HETATM 22 C C16 5TV . . . C 3 18.188 -4.55 20.394 1 39.51 ? C16 5TV 502 A 1 HETATM 23 N N2 5TV . . . C 3 18.927 -3.517 20.796 1 38.05 ? N2 5TV 502 A 1 HETATM 24 C C17 5TV . . . C 3 19.357 -2.948 19.599 1 41.83 ? C17 5TV 502 A 1 HETATM 25 C C18 5TV . . . C 3 18.869 -3.643 18.496 1 41.45 ? C18 5TV 502 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 25 #