data_7RLI # _model_server_result.job_id vc0xdF5Gl98SDAp1v30DMw _model_server_result.datetime_utc '2024-11-22 14:32:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rli # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":901}' # _entry.id 7RLI # _exptl.entry_id 7RLI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 413.472 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[4-(benzylamino)-7,8-dihydro-5H-pyrano[4,3-d]pyrimidin-2-yl]-2-methyl-1H-indole-4-carboxamide _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RLI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 O N N ? 2 Q N N ? 2 S N N ? 2 U N N ? 2 W N N ? 2 Y N N ? 2 AA N N ? 2 CA N N ? 2 EA N N ? 2 GA N N ? 2 IA N N # _chem_comp.formula 'C24 H23 N5 O2' _chem_comp.formula_weight 413.472 _chem_comp.id JDP _chem_comp.mon_nstd_flag . _chem_comp.name 1-[4-(benzylamino)-7,8-dihydro-5H-pyrano[4,3-d]pyrimidin-2-yl]-2-methyl-1H-indole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 JDP doub 215 n n N31 C02 JDP sing 216 n n C02 C03 JDP sing 217 n n C09 C08 JDP sing 218 n y C09 C10 JDP doub 219 n y C03 C08 JDP doub 220 n y C03 C04 JDP sing 221 n y C08 C07 JDP sing 222 n y C11 C10 JDP sing 223 n n C04 C05 JDP doub 224 n y C10 N12 JDP sing 225 n y C07 N12 JDP sing 226 n y C07 C06 JDP doub 227 n y N12 C13 JDP sing 228 n n C05 C06 JDP sing 229 n y C13 N30 JDP doub 230 n y C13 N14 JDP sing 231 n y N30 C29 JDP sing 232 n y N14 C15 JDP doub 233 n y C29 C28 JDP sing 234 n n C29 C24 JDP doub 235 n y C28 C27 JDP sing 236 n n C15 C24 JDP sing 237 n y C15 N16 JDP sing 238 n n C22 C21 JDP doub 239 n y C22 C23 JDP sing 240 n y C24 C25 JDP sing 241 n n C21 C20 JDP sing 242 n y C23 C18 JDP doub 243 n y N16 C17 JDP sing 244 n n C27 O26 JDP sing 245 n n C20 C19 JDP doub 246 n y C18 C19 JDP sing 247 n y C18 C17 JDP sing 248 n n C25 O26 JDP sing 249 n n C22 H1 JDP sing 250 n n C21 H2 JDP sing 251 n n C04 H3 JDP sing 252 n n C05 H4 JDP sing 253 n n C06 H5 JDP sing 254 n n C09 H6 JDP sing 255 n n C11 H7 JDP sing 256 n n C11 H8 JDP sing 257 n n C11 H9 JDP sing 258 n n N16 H10 JDP sing 259 n n C17 H11 JDP sing 260 n n C17 H12 JDP sing 261 n n C19 H13 JDP sing 262 n n C20 H14 JDP sing 263 n n C23 H15 JDP sing 264 n n C25 H16 JDP sing 265 n n C25 H17 JDP sing 266 n n C27 H18 JDP sing 267 n n C27 H19 JDP sing 268 n n C28 H20 JDP sing 269 n n C28 H21 JDP sing 270 n n N31 H22 JDP sing 271 n n N31 H23 JDP sing 272 n n # _atom_sites.entry_id 7RLI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 JDP A 1 901 900 JDP JDP . N 3 ADP A 1 902 1001 ADP ADP . O 2 JDP B 1 901 900 JDP JDP . P 3 ADP B 1 902 1001 ADP ADP . Q 2 JDP C 1 901 900 JDP JDP . R 3 ADP C 1 902 1001 ADP ADP . S 2 JDP D 1 901 900 JDP JDP . T 3 ADP D 1 902 1001 ADP ADP . U 2 JDP E 1 901 900 JDP JDP . V 3 ADP E 1 902 1001 ADP ADP . W 2 JDP F 1 901 900 JDP JDP . X 3 ADP F 1 902 1001 ADP ADP . Y 2 JDP G 1 901 900 JDP JDP . Z 3 ADP G 1 902 1001 ADP ADP . AA 2 JDP H 1 901 900 JDP JDP . BA 3 ADP H 1 902 1001 ADP ADP . CA 2 JDP I 1 901 900 JDP JDP . DA 3 ADP I 1 902 1001 ADP ADP . EA 2 JDP J 1 901 900 JDP JDP . FA 3 ADP J 1 902 1001 ADP ADP . GA 2 JDP K 1 901 900 JDP JDP . HA 3 ADP K 1 902 1001 ADP ADP . IA 2 JDP L 1 901 900 JDP JDP . JA 3 ADP L 1 902 1001 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C22 JDP . . . Y 2 166.974 227.225 181.456 1 100.92 ? C22 JDP 901 G 1 HETATM 2 C C21 JDP . . . Y 2 166.847 227.074 182.825 1 100.92 ? C21 JDP 901 G 1 HETATM 3 O O01 JDP . . . Y 2 164.927 218.683 181.786 1 100.92 ? O01 JDP 901 G 1 HETATM 4 C C02 JDP . . . Y 2 165.789 219.462 182.01 1 100.92 ? C02 JDP 901 G 1 HETATM 5 C C03 JDP . . . Y 2 165.602 220.938 181.672 1 100.92 ? C03 JDP 901 G 1 HETATM 6 C C04 JDP . . . Y 2 166.49 221.805 182.284 1 100.92 ? C04 JDP 901 G 1 HETATM 7 C C05 JDP . . . Y 2 166.407 223.166 182.041 1 100.92 ? C05 JDP 901 G 1 HETATM 8 C C06 JDP . . . Y 2 165.44 223.656 181.182 1 100.92 ? C06 JDP 901 G 1 HETATM 9 C C07 JDP . . . Y 2 164.541 222.774 180.561 1 100.92 ? C07 JDP 901 G 1 HETATM 10 C C08 JDP . . . Y 2 164.619 221.433 180.8 1 100.92 ? C08 JDP 901 G 1 HETATM 11 C C09 JDP . . . Y 2 163.639 220.819 180.077 1 100.92 ? C09 JDP 901 G 1 HETATM 12 C C10 JDP . . . Y 2 162.952 221.79 179.387 1 100.92 ? C10 JDP 901 G 1 HETATM 13 C C11 JDP . . . Y 2 161.918 220.947 178.648 1 100.92 ? C11 JDP 901 G 1 HETATM 14 N N12 JDP . . . Y 2 163.507 222.985 179.69 1 100.92 ? N12 JDP 901 G 1 HETATM 15 C C13 JDP . . . Y 2 163.098 224.27 179.17 1 100.92 ? C13 JDP 901 G 1 HETATM 16 N N14 JDP . . . Y 2 162.979 225.333 179.992 1 100.92 ? N14 JDP 901 G 1 HETATM 17 C C15 JDP . . . Y 2 162.617 226.504 179.502 1 100.92 ? C15 JDP 901 G 1 HETATM 18 N N16 JDP . . . Y 2 162.485 227.626 180.41 1 100.92 ? N16 JDP 901 G 1 HETATM 19 C C17 JDP . . . Y 2 163.557 228.591 180.527 1 100.92 ? C17 JDP 901 G 1 HETATM 20 C C18 JDP . . . Y 2 164.723 228.045 181.343 1 100.92 ? C18 JDP 901 G 1 HETATM 21 C C19 JDP . . . Y 2 164.599 227.899 182.712 1 100.92 ? C19 JDP 901 G 1 HETATM 22 C C20 JDP . . . Y 2 165.661 227.411 183.452 1 100.92 ? C20 JDP 901 G 1 HETATM 23 C C23 JDP . . . Y 2 165.91 227.714 180.715 1 100.92 ? C23 JDP 901 G 1 HETATM 24 C C24 JDP . . . Y 2 162.367 226.642 178.157 1 100.92 ? C24 JDP 901 G 1 HETATM 25 C C25 JDP . . . Y 2 161.928 228.009 177.529 1 100.92 ? C25 JDP 901 G 1 HETATM 26 O O26 JDP . . . Y 2 161.47 228.025 176.191 1 100.92 ? O26 JDP 901 G 1 HETATM 27 C C27 JDP . . . Y 2 162.198 227.135 175.338 1 100.92 ? C27 JDP 901 G 1 HETATM 28 C C28 JDP . . . Y 2 162.215 225.741 175.867 1 100.92 ? C28 JDP 901 G 1 HETATM 29 C C29 JDP . . . Y 2 162.49 225.578 177.347 1 100.92 ? C29 JDP 901 G 1 HETATM 30 N N30 JDP . . . Y 2 162.861 224.397 177.848 1 100.92 ? N30 JDP 901 G 1 HETATM 31 N N31 JDP . . . Y 2 167.039 219.014 182.593 1 100.92 ? N31 JDP 901 G 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 87 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 31 #