data_7RMJ # _model_server_result.job_id M9OVh06a2cAJsnrBO6WtAw _model_server_result.datetime_utc '2024-10-18 12:30:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rmj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":303}' # _entry.id 7RMJ # _exptl.entry_id 7RMJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7RMJ _cell.length_a 160.023 _cell.length_b 160.023 _cell.length_c 57.598 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RMJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall 'P 6' _symmetry.space_group_name_H-M 'P 6' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 ? hexameric 6 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,CA,DA 1 1 A,B,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,CA,DA 1 2 A,B,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,CA,DA 1 4 C,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 1 C,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 3 C,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 5 C,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 6 C,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 7 C,S,T,U,V,W,X,Y,Z,AA,BA,EA 2 8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 80.0115 -138.583983 0 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 160.023 0 0 5 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 7 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 8 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 L N N ? 3 M N N ? 3 T N N ? 3 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 B SG CYS 45 B CYS 45 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 45 A CYS 45 1_555 B SG CYS 14 B CYS 14 2_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 198 A CYS 198 1_555 A SG CYS 218 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 198 B CYS 198 1_555 B SG CYS 218 B CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 C SG CYS 14 C CYS 14 1_555 C SG CYS 45 C CYS 45 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 C SG CYS 198 C CYS 198 1_555 C SG CYS 218 C CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7RMJ _atom_sites.fract_transf_matrix[1][1] 0.006249 _atom_sites.fract_transf_matrix[1][2] 0.003608 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007216 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 61F A 1 301 301 61F LIG . E 3 IOD A 1 302 21 IOD IOD . F 4 CL A 1 303 4 CL CL . G 4 CL A 1 304 6 CL CL . H 4 CL A 1 305 18 CL CL . I 4 CL A 1 306 23 CL CL . J 4 CL A 1 307 28 CL CL . K 2 61F B 1 301 301 61F LIG . L 3 IOD B 1 302 20 IOD IOD . M 3 IOD B 1 303 25 IOD IOD . N 4 CL B 1 304 7 CL CL . O 4 CL B 1 305 14 CL CL . P 4 CL B 1 306 20 CL CL . Q 4 CL B 1 307 24 CL CL . R 4 CL B 1 308 26 CL CL . S 2 61F C 1 301 301 61F LIG . T 3 IOD C 1 302 13 IOD IOD . U 3 IOD C 1 303 24 IOD IOD . V 4 CL C 1 304 8 CL CL . W 4 CL C 1 305 12 CL CL . X 4 CL C 1 306 13 CL CL . Y 4 CL C 1 307 17 CL CL . Z 4 CL C 1 308 19 CL CL . AA 4 CL C 1 309 25 CL CL . BA 4 CL C 1 310 27 CL CL . CA 5 HOH A 1 401 24 HOH HOH . CA 5 HOH A 2 402 197 HOH HOH . CA 5 HOH A 3 403 153 HOH HOH . CA 5 HOH A 4 404 228 HOH HOH . CA 5 HOH A 5 405 185 HOH HOH . CA 5 HOH A 6 406 126 HOH HOH . CA 5 HOH A 7 407 247 HOH HOH . CA 5 HOH A 8 408 40 HOH HOH . CA 5 HOH A 9 409 88 HOH HOH . CA 5 HOH A 10 410 174 HOH HOH . CA 5 HOH A 11 411 90 HOH HOH . CA 5 HOH A 12 412 95 HOH HOH . CA 5 HOH A 13 413 82 HOH HOH . CA 5 HOH A 14 414 104 HOH HOH . CA 5 HOH A 15 415 94 HOH HOH . CA 5 HOH A 16 416 182 HOH HOH . CA 5 HOH A 17 417 135 HOH HOH . CA 5 HOH A 18 418 214 HOH HOH . CA 5 HOH A 19 419 71 HOH HOH . CA 5 HOH A 20 420 125 HOH HOH . CA 5 HOH A 21 421 253 HOH HOH . CA 5 HOH A 22 422 41 HOH HOH . CA 5 HOH A 23 423 46 HOH HOH . CA 5 HOH A 24 424 143 HOH HOH . CA 5 HOH A 25 425 220 HOH HOH . CA 5 HOH A 26 426 159 HOH HOH . CA 5 HOH A 27 427 18 HOH HOH . CA 5 HOH A 28 428 146 HOH HOH . CA 5 HOH A 29 429 131 HOH HOH . CA 5 HOH A 30 430 136 HOH HOH . CA 5 HOH A 31 431 59 HOH HOH . CA 5 HOH A 32 432 195 HOH HOH . CA 5 HOH A 33 433 163 HOH HOH . CA 5 HOH A 34 434 154 HOH HOH . CA 5 HOH A 35 435 162 HOH HOH . CA 5 HOH A 36 436 61 HOH HOH . CA 5 HOH A 37 437 121 HOH HOH . CA 5 HOH A 38 438 113 HOH HOH . CA 5 HOH A 39 439 127 HOH HOH . CA 5 HOH A 40 440 17 HOH HOH . CA 5 HOH A 41 441 73 HOH HOH . CA 5 HOH A 42 442 212 HOH HOH . CA 5 HOH A 43 443 249 HOH HOH . CA 5 HOH A 44 444 140 HOH HOH . CA 5 HOH A 45 445 166 HOH HOH . CA 5 HOH A 46 446 22 HOH HOH . CA 5 HOH A 47 447 257 HOH HOH . CA 5 HOH A 48 448 89 HOH HOH . CA 5 HOH A 49 449 66 HOH HOH . CA 5 HOH A 50 450 15 HOH HOH . CA 5 HOH A 51 451 147 HOH HOH . CA 5 HOH A 52 452 224 HOH HOH . CA 5 HOH A 53 453 6 HOH HOH . CA 5 HOH A 54 454 123 HOH HOH . CA 5 HOH A 55 455 119 HOH HOH . CA 5 HOH A 56 456 254 HOH HOH . CA 5 HOH A 57 457 32 HOH HOH . CA 5 HOH A 58 458 16 HOH HOH . CA 5 HOH A 59 459 7 HOH HOH . CA 5 HOH A 60 460 248 HOH HOH . CA 5 HOH A 61 461 252 HOH HOH . CA 5 HOH A 62 462 4 HOH HOH . CA 5 HOH A 63 463 258 HOH HOH . CA 5 HOH A 64 464 246 HOH HOH . CA 5 HOH A 65 465 251 HOH HOH . CA 5 HOH A 66 466 237 HOH HOH . DA 5 HOH B 1 401 13 HOH HOH . DA 5 HOH B 2 402 118 HOH HOH . DA 5 HOH B 3 403 65 HOH HOH . DA 5 HOH B 4 404 87 HOH HOH . DA 5 HOH B 5 405 148 HOH HOH . DA 5 HOH B 6 406 62 HOH HOH . DA 5 HOH B 7 407 27 HOH HOH . DA 5 HOH B 8 408 108 HOH HOH . DA 5 HOH B 9 409 245 HOH HOH . DA 5 HOH B 10 410 81 HOH HOH . DA 5 HOH B 11 411 64 HOH HOH . DA 5 HOH B 12 412 164 HOH HOH . DA 5 HOH B 13 413 227 HOH HOH . DA 5 HOH B 14 414 155 HOH HOH . DA 5 HOH B 15 415 226 HOH HOH . DA 5 HOH B 16 416 84 HOH HOH . DA 5 HOH B 17 417 241 HOH HOH . DA 5 HOH B 18 418 204 HOH HOH . DA 5 HOH B 19 419 98 HOH HOH . DA 5 HOH B 20 420 129 HOH HOH . DA 5 HOH B 21 421 47 HOH HOH . DA 5 HOH B 22 422 69 HOH HOH . DA 5 HOH B 23 423 193 HOH HOH . DA 5 HOH B 24 424 116 HOH HOH . DA 5 HOH B 25 425 74 HOH HOH . DA 5 HOH B 26 426 221 HOH HOH . DA 5 HOH B 27 427 151 HOH HOH . DA 5 HOH B 28 428 180 HOH HOH . DA 5 HOH B 29 429 44 HOH HOH . DA 5 HOH B 30 430 160 HOH HOH . DA 5 HOH B 31 431 75 HOH HOH . DA 5 HOH B 32 432 49 HOH HOH . DA 5 HOH B 33 433 239 HOH HOH . DA 5 HOH B 34 434 240 HOH HOH . DA 5 HOH B 35 435 179 HOH HOH . DA 5 HOH B 36 436 26 HOH HOH . DA 5 HOH B 37 437 201 HOH HOH . DA 5 HOH B 38 438 45 HOH HOH . DA 5 HOH B 39 439 190 HOH HOH . DA 5 HOH B 40 440 10 HOH HOH . DA 5 HOH B 41 441 8 HOH HOH . DA 5 HOH B 42 442 50 HOH HOH . DA 5 HOH B 43 443 192 HOH HOH . DA 5 HOH B 44 444 124 HOH HOH . DA 5 HOH B 45 445 243 HOH HOH . DA 5 HOH B 46 446 25 HOH HOH . DA 5 HOH B 47 447 42 HOH HOH . DA 5 HOH B 48 448 106 HOH HOH . DA 5 HOH B 49 449 52 HOH HOH . DA 5 HOH B 50 450 77 HOH HOH . DA 5 HOH B 51 451 57 HOH HOH . DA 5 HOH B 52 452 255 HOH HOH . DA 5 HOH B 53 453 215 HOH HOH . DA 5 HOH B 54 454 21 HOH HOH . DA 5 HOH B 55 455 225 HOH HOH . DA 5 HOH B 56 456 244 HOH HOH . DA 5 HOH B 57 457 242 HOH HOH . DA 5 HOH B 58 458 235 HOH HOH . DA 5 HOH B 59 459 238 HOH HOH . EA 5 HOH C 1 401 149 HOH HOH . EA 5 HOH C 2 402 97 HOH HOH . EA 5 HOH C 3 403 101 HOH HOH . EA 5 HOH C 4 404 211 HOH HOH . EA 5 HOH C 5 405 188 HOH HOH . EA 5 HOH C 6 406 150 HOH HOH . EA 5 HOH C 7 407 56 HOH HOH . EA 5 HOH C 8 408 173 HOH HOH . EA 5 HOH C 9 409 76 HOH HOH . EA 5 HOH C 10 410 176 HOH HOH . EA 5 HOH C 11 411 93 HOH HOH . EA 5 HOH C 12 412 55 HOH HOH . EA 5 HOH C 13 413 112 HOH HOH . EA 5 HOH C 14 414 53 HOH HOH . EA 5 HOH C 15 415 80 HOH HOH . EA 5 HOH C 16 416 70 HOH HOH . EA 5 HOH C 17 417 96 HOH HOH . EA 5 HOH C 18 418 172 HOH HOH . EA 5 HOH C 19 419 219 HOH HOH . EA 5 HOH C 20 420 199 HOH HOH . EA 5 HOH C 21 421 175 HOH HOH . EA 5 HOH C 22 422 144 HOH HOH . EA 5 HOH C 23 423 105 HOH HOH . EA 5 HOH C 24 424 54 HOH HOH . EA 5 HOH C 25 425 72 HOH HOH . EA 5 HOH C 26 426 141 HOH HOH . EA 5 HOH C 27 427 30 HOH HOH . EA 5 HOH C 28 428 103 HOH HOH . EA 5 HOH C 29 429 29 HOH HOH . EA 5 HOH C 30 430 28 HOH HOH . EA 5 HOH C 31 431 157 HOH HOH . EA 5 HOH C 32 432 33 HOH HOH . EA 5 HOH C 33 433 189 HOH HOH . EA 5 HOH C 34 434 109 HOH HOH . EA 5 HOH C 35 435 37 HOH HOH . EA 5 HOH C 36 436 145 HOH HOH . EA 5 HOH C 37 437 3 HOH HOH . EA 5 HOH C 38 438 191 HOH HOH . EA 5 HOH C 39 439 202 HOH HOH . EA 5 HOH C 40 440 206 HOH HOH . EA 5 HOH C 41 441 120 HOH HOH . EA 5 HOH C 42 442 85 HOH HOH . EA 5 HOH C 43 443 183 HOH HOH . EA 5 HOH C 44 444 35 HOH HOH . EA 5 HOH C 45 445 138 HOH HOH . EA 5 HOH C 46 446 128 HOH HOH . EA 5 HOH C 47 447 200 HOH HOH . EA 5 HOH C 48 448 169 HOH HOH . EA 5 HOH C 49 449 60 HOH HOH . EA 5 HOH C 50 450 111 HOH HOH . EA 5 HOH C 51 451 58 HOH HOH . EA 5 HOH C 52 452 110 HOH HOH . EA 5 HOH C 53 453 20 HOH HOH . EA 5 HOH C 54 454 130 HOH HOH . EA 5 HOH C 55 455 167 HOH HOH . EA 5 HOH C 56 456 122 HOH HOH . EA 5 HOH C 57 457 14 HOH HOH . EA 5 HOH C 58 458 102 HOH HOH . EA 5 HOH C 59 459 156 HOH HOH . EA 5 HOH C 60 460 208 HOH HOH . EA 5 HOH C 61 461 12 HOH HOH . EA 5 HOH C 62 462 43 HOH HOH . EA 5 HOH C 63 463 132 HOH HOH . EA 5 HOH C 64 464 99 HOH HOH . EA 5 HOH C 65 465 230 HOH HOH . EA 5 HOH C 66 466 250 HOH HOH . EA 5 HOH C 67 467 68 HOH HOH . EA 5 HOH C 68 468 38 HOH HOH . EA 5 HOH C 69 469 67 HOH HOH . EA 5 HOH C 70 470 232 HOH HOH . EA 5 HOH C 71 471 51 HOH HOH . EA 5 HOH C 72 472 171 HOH HOH . EA 5 HOH C 73 473 217 HOH HOH . EA 5 HOH C 74 474 9 HOH HOH . EA 5 HOH C 75 475 187 HOH HOH . EA 5 HOH C 76 476 139 HOH HOH . EA 5 HOH C 77 477 177 HOH HOH . EA 5 HOH C 78 478 79 HOH HOH . EA 5 HOH C 79 479 36 HOH HOH . EA 5 HOH C 80 480 92 HOH HOH . EA 5 HOH C 81 481 100 HOH HOH . EA 5 HOH C 82 482 48 HOH HOH . EA 5 HOH C 83 483 229 HOH HOH . EA 5 HOH C 84 484 114 HOH HOH . EA 5 HOH C 85 485 39 HOH HOH . EA 5 HOH C 86 486 184 HOH HOH . EA 5 HOH C 87 487 234 HOH HOH . EA 5 HOH C 88 488 256 HOH HOH . EA 5 HOH C 89 489 83 HOH HOH . EA 5 HOH C 90 490 236 HOH HOH . EA 5 HOH C 91 491 34 HOH HOH . EA 5 HOH C 92 492 233 HOH HOH . EA 5 HOH C 93 493 218 HOH HOH . EA 5 HOH C 94 494 1 HOH HOH . EA 5 HOH C 95 495 2 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id U _atom_site.label_entity_id 3 _atom_site.Cartn_x 7.183 _atom_site.Cartn_y -1.785 _atom_site.Cartn_z 23.997 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 303 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #