data_7RMK
#
_model_server_result.job_id            g-keaiLUI-gb4AJ7qTVZwA 
_model_server_result.datetime_utc      '2024-11-16 11:41:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rmk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"IA","auth_seq_id":602}' 
#
_entry.id    7RMK 
#
_exptl.entry_id    7RMK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    28 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7RMK 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RMK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    28-meric 
_pdbx_struct_assembly.oligomeric_count      28 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 CA N N 
? 2 FA N N 
? 2 GA N N 
? 2 IA N N 
? 2 KA N N 
? 2 NA N N 
? 2 OA N N 
? 2 QA N N 
? 2 SA N N 
? 2 VA N N 
? 2 WA N N 
? 2 YA N N 
? 2 AB N N 
? 2 DB N N 
? 2 EB N N 
? 2 GB N N 
? 2 IB N N 
? 2 LB N N 
? 2 MB N N 
? 2 OB N N 
? 2 QB N N 
? 2 TB N N 
? 2 UB N N 
? 2 WB N N 
? 2 YB N N 
? 2 BC N N 
? 2 CC N N 
? 2 EC N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7RMK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
CA 2 ATP R 1 601 601 ATP ATP . 
DA 3 UTP R 1 602 602 UTP UTP . 
EA 3 UTP K 1 601 602 UTP UTP . 
FA 2 ATP K 1 602 601 ATP ATP . 
GA 2 ATP L 1 601 601 ATP ATP . 
HA 3 UTP M 1 601 602 UTP UTP . 
IA 2 ATP M 1 602 601 ATP ATP . 
JA 3 UTP M 1 603 602 UTP UTP . 
KA 2 ATP Y 1 601 601 ATP ATP . 
LA 3 UTP Y 1 602 602 UTP UTP . 
MA 3 UTP I 1 601 602 UTP UTP . 
NA 2 ATP I 1 602 601 ATP ATP . 
OA 2 ATP P 1 601 601 ATP ATP . 
PA 3 UTP U 1 601 602 UTP UTP . 
QA 2 ATP U 1 602 601 ATP ATP . 
RA 3 UTP U 1 603 602 UTP UTP . 
SA 2 ATP D 1 601 601 ATP ATP . 
TA 3 UTP D 1 602 602 UTP UTP . 
UA 3 UTP A 1 601 602 UTP UTP . 
VA 2 ATP A 1 602 601 ATP ATP . 
WA 2 ATP B 1 601 601 ATP ATP . 
XA 3 UTP C 1 601 602 UTP UTP . 
YA 2 ATP C 1 602 601 ATP ATP . 
ZA 3 UTP C 1 603 602 UTP UTP . 
AB 2 ATP Z 1 601 601 ATP ATP . 
BB 3 UTP Z 1 602 602 UTP UTP . 
CB 3 UTP J 1 601 602 UTP UTP . 
DB 2 ATP J 1 602 601 ATP ATP . 
EB 2 ATP Q 1 601 601 ATP ATP . 
FB 3 UTP V 1 601 602 UTP UTP . 
GB 2 ATP V 1 602 601 ATP ATP . 
HB 3 UTP V 1 603 602 UTP UTP . 
IB 2 ATP H 1 601 601 ATP ATP . 
JB 3 UTP H 1 602 602 UTP UTP . 
KB 3 UTP E 1 601 602 UTP UTP . 
LB 2 ATP E 1 602 601 ATP ATP . 
MB 2 ATP F 1 601 601 ATP ATP . 
NB 3 UTP G 1 601 602 UTP UTP . 
OB 2 ATP G 1 602 601 ATP ATP . 
PB 3 UTP G 1 603 602 UTP UTP . 
QB 2 ATP a 1 601 601 ATP ATP . 
RB 3 UTP a 1 602 602 UTP UTP . 
SB 3 UTP N 1 601 602 UTP UTP . 
TB 2 ATP N 1 602 601 ATP ATP . 
UB 2 ATP S 1 601 601 ATP ATP . 
VB 3 UTP W 1 601 602 UTP UTP . 
WB 2 ATP W 1 602 601 ATP ATP . 
XB 3 UTP W 1 603 602 UTP UTP . 
YB 2 ATP b 1 601 601 ATP ATP . 
ZB 3 UTP b 1 602 602 UTP UTP . 
AC 3 UTP O 1 601 602 UTP UTP . 
BC 2 ATP O 1 602 601 ATP ATP . 
CC 2 ATP T 1 601 601 ATP ATP . 
DC 3 UTP X 1 601 602 UTP UTP . 
EC 2 ATP X 1 602 601 ATP ATP . 
FC 3 UTP X 1 603 602 UTP UTP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . IA 2 274.287 181.77 248.846 1 43.49 ? PG ATP 602 M 1 
HETATM 2 O O1G ATP . . . IA 2 275.651 181.326 249.28 1 43.49 ? O1G ATP 602 M 1 
HETATM 3 O O2G ATP . . . IA 2 274.229 183.249 248.609 1 43.49 ? O2G ATP 602 M 1 
HETATM 4 O O3G ATP . . . IA 2 273.2 181.291 249.761 1 43.49 ? O3G ATP 602 M 1 
HETATM 5 P PB ATP . . . IA 2 273.12 181.254 246.131 1 43.49 ? PB ATP 602 M 1 
HETATM 6 O O1B ATP . . . IA 2 271.858 180.53 246.327 1 43.49 ? O1B ATP 602 M 1 
HETATM 7 O O2B ATP . . . IA 2 273.989 180.887 244.984 1 43.49 ? O2B ATP 602 M 1 
HETATM 8 O O3B ATP . . . IA 2 274.01 181.049 247.444 1 43.49 ? O3B ATP 602 M 1 
HETATM 9 P PA ATP . . . IA 2 271.562 183.816 246.261 1 43.49 ? PA ATP 602 M 1 
HETATM 10 O O1A ATP . . . IA 2 270.365 183.257 245.583 1 43.49 ? O1A ATP 602 M 1 
HETATM 11 O O2A ATP . . . IA 2 271.42 184.195 247.695 1 43.49 ? O2A ATP 602 M 1 
HETATM 12 O O3A ATP . . . IA 2 272.814 182.826 246.105 1 43.49 ? O3A ATP 602 M 1 
HETATM 13 O O5' ATP . . . IA 2 272.085 185.077 245.439 1 43.49 ? O5' ATP 602 M 1 
HETATM 14 C C5' ATP . . . IA 2 273.148 185.863 246.019 1 43.49 ? C5' ATP 602 M 1 
HETATM 15 C C4' ATP . . . IA 2 272.945 187.313 245.629 1 43.49 ? C4' ATP 602 M 1 
HETATM 16 O O4' ATP . . . IA 2 272.598 187.367 244.219 1 43.49 ? O4' ATP 602 M 1 
HETATM 17 C C3' ATP . . . IA 2 271.808 188.045 246.363 1 43.49 ? C3' ATP 602 M 1 
HETATM 18 O O3' ATP . . . IA 2 272.14 189.385 246.708 1 43.49 ? O3' ATP 602 M 1 
HETATM 19 C C2' ATP . . . IA 2 270.667 188.025 245.337 1 43.49 ? C2' ATP 602 M 1 
HETATM 20 O O2' ATP . . . IA 2 269.735 189.07 245.516 1 43.49 ? O2' ATP 602 M 1 
HETATM 21 C C1' ATP . . . IA 2 271.459 188.175 244.041 1 43.49 ? C1' ATP 602 M 1 
HETATM 22 N N9 ATP . . . IA 2 270.748 187.718 242.845 1 43.49 ? N9 ATP 602 M 1 
HETATM 23 C C8 ATP . . . IA 2 270.254 186.465 242.632 1 43.49 ? C8 ATP 602 M 1 
HETATM 24 N N7 ATP . . . IA 2 269.647 186.341 241.476 1 43.49 ? N7 ATP 602 M 1 
HETATM 25 C C5 ATP . . . IA 2 269.759 187.595 240.895 1 43.49 ? C5 ATP 602 M 1 
HETATM 26 C C6 ATP . . . IA 2 269.322 188.108 239.663 1 43.49 ? C6 ATP 602 M 1 
HETATM 27 N N6 ATP . . . IA 2 268.658 187.398 238.756 1 43.49 ? N6 ATP 602 M 1 
HETATM 28 N N1 ATP . . . IA 2 269.6 189.403 239.4 1 43.49 ? N1 ATP 602 M 1 
HETATM 29 C C2 ATP . . . IA 2 270.272 190.115 240.312 1 43.49 ? C2 ATP 602 M 1 
HETATM 30 N N3 ATP . . . IA 2 270.729 189.74 241.501 1 43.49 ? N3 ATP 602 M 1 
HETATM 31 C C4 ATP . . . IA 2 270.437 188.451 241.732 1 43.49 ? C4 ATP 602 M 1 
HETATM 32 H "H5'1" ATP . . . IA 2 274.025 185.527 245.693 1 43.49 ? "H5'1" ATP 602 M 1 
HETATM 33 H "H5'2" ATP . . . IA 2 273.128 185.772 247.008 1 43.49 ? "H5'2" ATP 602 M 1 
HETATM 34 H H4' ATP . . . IA 2 273.799 187.803 245.76 1 43.49 ? H4' ATP 602 M 1 
HETATM 35 H H3' ATP . . . IA 2 271.563 187.538 247.189 1 43.49 ? H3' ATP 602 M 1 
HETATM 36 H HO3' ATP . . . IA 2 272.219 189.44 247.551 1 43.49 ? HO3' ATP 602 M 1 
HETATM 37 H H2' ATP . . . IA 2 270.188 187.144 245.353 1 43.49 ? H2' ATP 602 M 1 
HETATM 38 H HO2' ATP . . . IA 2 270.084 189.679 245.996 1 43.49 ? HO2' ATP 602 M 1 
HETATM 39 H H1' ATP . . . IA 2 271.737 189.116 243.929 1 43.49 ? H1' ATP 602 M 1 
HETATM 40 H H8 ATP . . . IA 2 270.318 185.765 243.252 1 43.49 ? H8 ATP 602 M 1 
HETATM 41 H HN61 ATP . . . IA 2 267.811 187.211 238.882 1 43.49 ? HN61 ATP 602 M 1 
HETATM 42 H HN62 ATP . . . IA 2 269.073 187.124 238.035 1 43.49 ? HN62 ATP 602 M 1 
HETATM 43 H H2 ATP . . . IA 2 270.44 191.015 240.077 1 43.49 ? H2 ATP 602 M 1 
#
_model_server_stats.io_time_ms              302 
_model_server_stats.parse_time_ms           61 
_model_server_stats.create_model_time_ms    692 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#