data_7RMR # _model_server_result.job_id 3t-_OAK4S263QZhRVdwTCA _model_server_result.datetime_utc '2024-10-19 12:38:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rmr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 7RMR # _exptl.entry_id 7RMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.082 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'THIOCYANATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.24 _cell.angle_gamma 90 _cell.entry_id 7RMR _cell.length_a 27.095 _cell.length_b 24.757 _cell.length_c 30.244 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 19 A CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 A SG CYS 21 A CYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 12 A CYS 12 1_555 A SG CYS 26 A CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf4 B SG DCY 3 B DCY 3 1_555 B SG DCY 19 B DCY 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 B SG DCY 7 B DCY 7 1_555 B SG DCY 21 B DCY 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf6 B SG DCY 12 B DCY 12 1_555 B SG DCY 26 B DCY 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? covale ? covale1 A N ILE 1 A ILE 1 1_555 A C GLY 30 A GLY 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale2 B C DIL 1 B DIL 1 1_555 B N DPR 2 B DPR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale3 B N DIL 1 B DIL 1 1_555 B C GLY 30 B GLY 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.359 ? covale ? covale4 B C DPR 2 B DPR 2 1_555 B N DCY 3 B DCY 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 B C DCY 3 B DCY 3 1_555 B N GLY 4 B GLY 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale6 B C GLY 4 B GLY 4 1_555 B N DGL 5 B DGL 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale7 B C DGL 5 B DGL 5 1_555 B N DSN 6 B DSN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 B C DSN 6 B DSN 6 1_555 B N DCY 7 B DCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 B C DCY 7 B DCY 7 1_555 B N DVA 8 B DVA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C DVA 8 B DVA 8 1_555 B N DTR 9 B DTR 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale11 B C DTR 9 B DTR 9 1_555 B N DLE 10 B DLE 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 B C DLE 10 B DLE 10 1_555 B N DPR 11 B DPR 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 B C DPR 11 B DPR 11 1_555 B N DCY 12 B DCY 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale14 B C DCY 12 B DCY 12 1_555 B N DIL 13 B DIL 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale15 B C DIL 13 B DIL 13 1_555 B N DSN 14 B DSN 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 B C DSN 14 B DSN 14 1_555 B N DSN 15 B DSN 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale17 B C DSN 15 B DSN 15 1_555 B N DAL 16 B DAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale18 B C DAL 16 B DAL 16 1_555 B N DIL 17 B DIL 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale19 B C DIL 17 B DIL 17 1_555 B N GLY 18 B GLY 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale20 B C GLY 18 B GLY 18 1_555 B N DCY 19 B DCY 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale21 B C DCY 19 B DCY 19 1_555 B N DSN 20 B DSN 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 B C DSN 20 B DSN 20 1_555 B N DCY 21 B DCY 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale23 B C DCY 21 B DCY 21 1_555 B N DLY 22 B DLY 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale24 B C DLY 22 B DLY 22 1_555 B N DSN 23 B DSN 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale25 B C DSN 23 B DSN 23 1_555 B N DLY 24 B DLY 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale26 B C DLY 24 B DLY 24 1_555 B N DVA 25 B DVA 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale27 B C DVA 25 B DVA 25 1_555 B N DCY 26 B DCY 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale28 B C DCY 26 B DCY 26 1_555 B N DTY 27 B DTY 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale29 B C DTY 27 B DTY 27 1_555 B N DAR 28 B DAR 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale30 B C DAR 28 B DAR 28 1_555 B N DSG 29 B DSG 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale31 B C DSG 29 B DSG 29 1_555 B N GLY 30 B GLY 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C N S -1' _chem_comp.formula_weight 58.082 _chem_comp.id SCN _chem_comp.mon_nstd_flag . _chem_comp.name 'THIOCYANATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C SCN sing 430 n n C N SCN trip 431 n n # _atom_sites.entry_id 7RMR _atom_sites.fract_transf_matrix[1][1] 0.036907 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.017401 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.040393 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.036555 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SCN B 1 101 101 SCN SCN . D 3 SCN B 1 102 101 SCN SCN . E 4 HOH A 1 101 5 HOH HOH . E 4 HOH A 2 102 17 HOH HOH . E 4 HOH A 3 103 13 HOH HOH . E 4 HOH A 4 104 18 HOH HOH . E 4 HOH A 5 105 14 HOH HOH . E 4 HOH A 6 106 36 HOH HOH . E 4 HOH A 7 107 1 HOH HOH . E 4 HOH A 8 108 30 HOH HOH . E 4 HOH A 9 109 9 HOH HOH . E 4 HOH A 10 110 21 HOH HOH . E 4 HOH A 11 111 8 HOH HOH . E 4 HOH A 12 112 6 HOH HOH . E 4 HOH A 13 113 40 HOH HOH . E 4 HOH A 14 114 41 HOH HOH . E 4 HOH A 15 115 16 HOH HOH . E 4 HOH A 16 116 23 HOH HOH . E 4 HOH A 17 117 31 HOH HOH . E 4 HOH A 18 118 28 HOH HOH . E 4 HOH A 19 119 35 HOH HOH . E 4 HOH A 20 120 7 HOH HOH . F 4 HOH B 1 201 15 HOH HOH . F 4 HOH B 2 202 3 HOH HOH . F 4 HOH B 3 203 4 HOH HOH . F 4 HOH B 4 204 37 HOH HOH . F 4 HOH B 5 205 12 HOH HOH . F 4 HOH B 6 206 20 HOH HOH . F 4 HOH B 7 207 19 HOH HOH . F 4 HOH B 8 208 11 HOH HOH . F 4 HOH B 9 209 32 HOH HOH . F 4 HOH B 10 210 2 HOH HOH . F 4 HOH B 11 211 10 HOH HOH . F 4 HOH B 12 212 38 HOH HOH . F 4 HOH B 13 213 29 HOH HOH . F 4 HOH B 14 214 26 HOH HOH . F 4 HOH B 15 215 25 HOH HOH . F 4 HOH B 16 216 24 HOH HOH . F 4 HOH B 17 217 22 HOH HOH . F 4 HOH B 18 218 33 HOH HOH . F 4 HOH B 19 219 27 HOH HOH . F 4 HOH B 20 220 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SCN . . . D 3 -14.667 0.549 8.763 1 25.19 ? S SCN 102 B 1 HETATM 2 C C SCN . . . D 3 -14.53 -0.735 7.526 1 23.98 ? C SCN 102 B 1 HETATM 3 N N SCN . . . D 3 -14.25 -1.55 6.747 1 23.89 ? N SCN 102 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 3 #