data_7RN0 # _model_server_result.job_id jWKfbI1Y20vQsksZbgmkgg _model_server_result.datetime_utc '2025-04-21 15:12:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rn0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7RN0 # _exptl.entry_id 7RN0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 438.521 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-{acetyl[4-(1H-pyrrol-1-yl)phenyl]amino}-N-[(1S)-1-phenylethyl]-2-(pyridin-3-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.37 _cell.angle_gamma 90 _cell.entry_id 7RN0 _cell.length_a 45.42 _cell.length_b 53.43 _cell.length_c 112.031 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RN0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 145 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id C33 _struct_conn.ptnr2_label_comp_id 5ZB _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 5ZB _struct_conn.ptnr2_auth_seq_id 503 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.828 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H26 N4 O2' _chem_comp.formula_weight 438.521 _chem_comp.id 5ZB _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-{acetyl[4-(1H-pyrrol-1-yl)phenyl]amino}-N-[(1S)-1-phenylethyl]-2-(pyridin-3-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C19 5ZB doub 1 n y C20 C21 5ZB sing 2 n y C19 N18 5ZB sing 3 n y C21 C16 5ZB doub 4 n y O01 C02 5ZB doub 5 n n N18 C17 5ZB doub 6 n y C16 C17 5ZB sing 7 n y C16 C15 5ZB sing 8 n n C02 C33 5ZB sing 9 n n C02 N03 5ZB sing 10 n n C15 N03 5ZB sing 11 n n C15 C22 5ZB sing 12 n n N03 C04 5ZB sing 13 n n C22 N23 5ZB sing 14 n n C22 O32 5ZB doub 15 n n N23 C24 5ZB sing 16 n n C04 C05 5ZB doub 17 n y C04 C14 5ZB sing 18 n y C05 C06 5ZB sing 19 n y C25 C24 5ZB sing 20 n n C24 C26 5ZB sing 21 n n C14 C13 5ZB doub 22 n y C06 C07 5ZB doub 23 n y C26 C31 5ZB doub 24 n y C26 C27 5ZB sing 25 n y C31 C30 5ZB sing 26 n y C13 C07 5ZB sing 27 n y C07 N08 5ZB sing 28 n n C30 C29 5ZB doub 29 n y C27 C28 5ZB doub 30 n y N08 C09 5ZB sing 31 n y N08 C12 5ZB sing 32 n y C09 C10 5ZB doub 33 n y C29 C28 5ZB sing 34 n y C12 C11 5ZB doub 35 n y C10 C11 5ZB sing 36 n y C10 H1 5ZB sing 37 n n C13 H2 5ZB sing 38 n n C15 H3 5ZB sing 39 n n C17 H4 5ZB sing 40 n n C20 H5 5ZB sing 41 n n C21 H6 5ZB sing 42 n n C24 H7 5ZB sing 43 n n C28 H8 5ZB sing 44 n n C05 H9 5ZB sing 45 n n C06 H10 5ZB sing 46 n n C09 H11 5ZB sing 47 n n C11 H12 5ZB sing 48 n n C12 H13 5ZB sing 49 n n C14 H14 5ZB sing 50 n n C19 H15 5ZB sing 51 n n N23 H16 5ZB sing 52 n n C25 H17 5ZB sing 53 n n C25 H18 5ZB sing 54 n n C25 H19 5ZB sing 55 n n C27 H20 5ZB sing 56 n n C29 H21 5ZB sing 57 n n C30 H22 5ZB sing 58 n n C31 H23 5ZB sing 59 n n C33 H24 5ZB sing 60 n n C33 H25 5ZB sing 61 n n C33 H26 5ZB sing 62 n n # _atom_sites.entry_id 7RN0 _atom_sites.fract_transf_matrix[1][1] 0.022017 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004429 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018716 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 501 GOL GOL . C 2 GOL A 1 502 601 GOL GOL . D 3 5ZB A 1 503 701 5ZB LIG . E 4 HOH A 1 601 32 HOH HOH . E 4 HOH A 2 602 57 HOH HOH . E 4 HOH A 3 603 76 HOH HOH . E 4 HOH A 4 604 18 HOH HOH . E 4 HOH A 5 605 63 HOH HOH . E 4 HOH A 6 606 74 HOH HOH . E 4 HOH A 7 607 75 HOH HOH . E 4 HOH A 8 608 29 HOH HOH . E 4 HOH A 9 609 6 HOH HOH . E 4 HOH A 10 610 8 HOH HOH . E 4 HOH A 11 611 62 HOH HOH . E 4 HOH A 12 612 64 HOH HOH . E 4 HOH A 13 613 3 HOH HOH . E 4 HOH A 14 614 10 HOH HOH . E 4 HOH A 15 615 38 HOH HOH . E 4 HOH A 16 616 3 HOH HOH . E 4 HOH A 17 617 59 HOH HOH . E 4 HOH A 18 618 22 HOH HOH . E 4 HOH A 19 619 73 HOH HOH . E 4 HOH A 20 620 108 HOH HOH . E 4 HOH A 21 621 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 5ZB . . . D 3 -23.33 -3.737 17.97 1 41.68 ? C10 5ZB 503 A 1 HETATM 2 C C13 5ZB . . . D 3 -19.876 -2.146 14.968 1 39.61 ? C13 5ZB 503 A 1 HETATM 3 C C15 5ZB . . . D 3 -19.718 -0.316 10.715 1 36.68 ? C15 5ZB 503 A 1 HETATM 4 C C17 5ZB . . . D 3 -17.291 -0.242 10.438 1 37.92 ? C17 5ZB 503 A 1 HETATM 5 C C20 5ZB . . . D 3 -17.326 1.565 8.424 1 36.53 ? C20 5ZB 503 A 1 HETATM 6 C C21 5ZB . . . D 3 -18.529 1.092 9.005 1 37.81 ? C21 5ZB 503 A 1 HETATM 7 C C22 5ZB . . . D 3 -19.754 0.751 11.885 1 40.82 ? C22 5ZB 503 A 1 HETATM 8 C C24 5ZB . . . D 3 -20.432 2.846 13.193 1 38.27 ? C24 5ZB 503 A 1 HETATM 9 C C26 5ZB . . . D 3 -20.981 2.175 14.385 1 38.08 ? C26 5ZB 503 A 1 HETATM 10 C C28 5ZB . . . D 3 -20.76 1.312 16.661 1 44.39 ? C28 5ZB 503 A 1 HETATM 11 O O01 5ZB . . . D 3 -18.574 -2.507 9.348 1 40.87 ? O01 5ZB 503 A 1 HETATM 12 C C02 5ZB . . . D 3 -18.945 -2.717 10.499 1 38.82 ? C02 5ZB 503 A 1 HETATM 13 N N03 5ZB . . . D 3 -19.547 -1.589 11.248 1 34.21 ? N03 5ZB 503 A 1 HETATM 14 C C04 5ZB . . . D 3 -19.997 -1.86 12.524 1 39.83 ? C04 5ZB 503 A 1 HETATM 15 C C05 5ZB . . . D 3 -21.324 -2.225 12.662 1 36.65 ? C05 5ZB 503 A 1 HETATM 16 C C06 5ZB . . . D 3 -21.895 -2.544 13.894 1 38.82 ? C06 5ZB 503 A 1 HETATM 17 C C07 5ZB . . . D 3 -21.22 -2.502 15.083 1 38.23 ? C07 5ZB 503 A 1 HETATM 18 N N08 5ZB . . . D 3 -21.88 -2.837 16.386 1 39.39 ? N08 5ZB 503 A 1 HETATM 19 C C09 5ZB . . . D 3 -23.012 -3.678 16.558 1 40.43 ? C09 5ZB 503 A 1 HETATM 20 C C11 5ZB . . . D 3 -22.384 -2.908 18.693 1 42.19 ? C11 5ZB 503 A 1 HETATM 21 C C12 5ZB . . . D 3 -21.496 -2.384 17.744 1 42.66 ? C12 5ZB 503 A 1 HETATM 22 C C14 5ZB . . . D 3 -19.281 -1.796 13.751 1 37.19 ? C14 5ZB 503 A 1 HETATM 23 C C16 5ZB . . . D 3 -18.539 0.161 10.006 1 34.22 ? C16 5ZB 503 A 1 HETATM 24 N N18 5ZB . . . D 3 -16.095 0.165 9.964 1 32.66 ? N18 5ZB 503 A 1 HETATM 25 C C19 5ZB . . . D 3 -16.121 1.082 8.932 1 35.97 ? C19 5ZB 503 A 1 HETATM 26 N N23 5ZB . . . D 3 -20.617 1.912 11.978 1 40.14 ? N23 5ZB 503 A 1 HETATM 27 C C25 5ZB . . . D 3 -21.042 4.212 12.869 1 40.74 ? C25 5ZB 503 A 1 HETATM 28 C C27 5ZB . . . D 3 -20.248 1.995 15.524 1 47.51 ? C27 5ZB 503 A 1 HETATM 29 C C29 5ZB . . . D 3 -22.052 0.801 16.629 1 41.37 ? C29 5ZB 503 A 1 HETATM 30 C C30 5ZB . . . D 3 -22.744 0.96 15.476 1 38.47 ? C30 5ZB 503 A 1 HETATM 31 C C31 5ZB . . . D 3 -22.209 1.651 14.397 1 39.83 ? C31 5ZB 503 A 1 HETATM 32 O O32 5ZB . . . D 3 -18.902 0.589 12.801 1 39.8 ? O32 5ZB 503 A 1 HETATM 33 C C33 5ZB . . . D 3 -18.597 -4.088 11.059 1 37.56 ? C33 5ZB 503 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #