data_7RNP # _model_server_result.job_id tTjCch35rycRnkGLl_H3dg _model_server_result.datetime_utc '2024-10-18 19:32:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rnp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 7RNP # _exptl.entry_id 7RNP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.67 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-chloro-L-tryptophan _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RNP _cell.length_a 56.162 _cell.length_b 81.198 _cell.length_c 321.014 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RNP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,J,K,N 1 1 B,C,G,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 81 A HIS 81 1_555 A N LLP 82 A LLP 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C LLP 82 A LLP 82 1_555 A N THR 83 A THR 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B C HIS 81 B HIS 81 1_555 B N LLP 82 B LLP 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale4 B C LLP 82 B LLP 82 1_555 B N THR 83 B THR 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 C C HIS 81 C HIS 81 1_555 C N LLP 82 C LLP 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale6 C C LLP 82 C LLP 82 1_555 C N THR 83 C THR 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 D C HIS 81 D HIS 81 1_555 D N LLP 82 D LLP 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 D C LLP 82 D LLP 82 1_555 D N THR 83 D THR 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A O SER 263 A SER 263 1_555 F NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc2 A OG SER 265 A SER 265 1_555 F NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? metalc ? metalc3 A O TYR 301 A TYR 301 1_555 F NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc4 A O GLY 303 A GLY 303 1_555 F NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc5 B O GLY 227 B GLY 227 1_555 H NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? metalc ? metalc6 B O SER 263 B SER 263 1_555 H NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc7 B OG SER 265 B SER 265 1_555 H NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.096 ? metalc ? metalc8 B O TYR 301 B TYR 301 1_555 H NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc9 B O GLY 303 B GLY 303 1_555 H NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc10 C O GLY 227 C GLY 227 1_555 I NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? metalc ? metalc11 C O SER 263 C SER 263 1_555 I NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc12 C OG SER 265 C SER 265 1_555 I NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.174 ? metalc ? metalc13 C O TYR 301 C TYR 301 1_555 I NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc14 C O GLY 303 C GLY 303 1_555 I NA NA . C NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc15 D O GLY 227 D GLY 227 1_555 J NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.046 ? metalc ? metalc16 D O SER 263 D SER 263 1_555 J NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc17 D O TYR 301 D TYR 301 1_555 J NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc18 D O GLY 303 D GLY 303 1_555 J NA NA . D NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? # _chem_comp.formula 'C11 H11 Cl N2 O2' _chem_comp.formula_weight 238.67 _chem_comp.id 6G5 _chem_comp.mon_nstd_flag . _chem_comp.name 4-chloro-L-tryptophan _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C11 6G5 doub 1 n n C11 O1 6G5 sing 2 n n C11 C10 6G5 sing 3 n n C10 C9 6G5 sing 4 n n C10 N2 6G5 sing 5 n n C9 C8 6G5 sing 6 n n C7 C8 6G5 doub 7 n y C7 N1 6G5 sing 8 n y C8 C6 6G5 sing 9 n y CL1 C1 6G5 sing 10 n n N1 C5 6G5 sing 11 n y C6 C1 6G5 doub 12 n y C6 C5 6G5 sing 13 n y C1 C2 6G5 sing 14 n y C5 C4 6G5 doub 15 n y C2 C3 6G5 doub 16 n y C4 C3 6G5 sing 17 n y N1 H1 6G5 sing 18 n n C4 H2 6G5 sing 19 n n C7 H3 6G5 sing 20 n n C10 H4 6G5 sing 21 n n O1 H5 6G5 sing 22 n n N2 H6 6G5 sing 23 n n N2 H7 6G5 sing 24 n n C9 H9 6G5 sing 25 n n C9 H10 6G5 sing 26 n n C2 H11 6G5 sing 27 n n C3 H12 6G5 sing 28 n n # _atom_sites.entry_id 7RNP _atom_sites.fract_transf_matrix[1][1] 0.017806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012316 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003115 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 6G5 A 1 401 401 6G5 LIG . F 3 NA A 1 402 4 NA NA . G 2 6G5 B 1 401 401 6G5 LIG . H 3 NA B 1 402 1 NA NA . I 3 NA C 1 401 3 NA NA . J 3 NA D 1 401 2 NA NA . K 4 HOH A 1 501 27 HOH HOH . K 4 HOH A 2 502 13 HOH HOH . K 4 HOH A 3 503 31 HOH HOH . K 4 HOH A 4 504 2 HOH HOH . K 4 HOH A 5 505 32 HOH HOH . K 4 HOH A 6 506 15 HOH HOH . K 4 HOH A 7 507 9 HOH HOH . K 4 HOH A 8 508 26 HOH HOH . K 4 HOH A 9 509 5 HOH HOH . K 4 HOH A 10 510 6 HOH HOH . K 4 HOH A 11 511 21 HOH HOH . K 4 HOH A 12 512 30 HOH HOH . K 4 HOH A 13 513 24 HOH HOH . L 4 HOH B 1 501 11 HOH HOH . L 4 HOH B 2 502 10 HOH HOH . L 4 HOH B 3 503 23 HOH HOH . M 4 HOH C 1 501 14 HOH HOH . M 4 HOH C 2 502 12 HOH HOH . N 4 HOH D 1 501 29 HOH HOH . N 4 HOH D 2 502 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 6G5 . . . E 2 -17.819 42.191 -77.537 1 77.03 0 N1 6G5 401 A 1 HETATM 2 C C4 6G5 . . . E 2 -16.851 42.698 -75.385 1 77.97 0 C4 6G5 401 A 1 HETATM 3 C C5 6G5 . . . E 2 -16.9 42.694 -76.718 1 76.69 0 C5 6G5 401 A 1 HETATM 4 C C6 6G5 . . . E 2 -15.936 43.263 -77.457 1 79.26 0 C6 6G5 401 A 1 HETATM 5 C C7 6G5 . . . E 2 -17.452 42.432 -78.788 1 77.25 0 C7 6G5 401 A 1 HETATM 6 C C8 6G5 . . . E 2 -16.306 43.099 -78.732 1 78.93 0 C8 6G5 401 A 1 HETATM 7 C C10 6G5 . . . E 2 -16.318 44.621 -80.77 1 79.95 0 C10 6G5 401 A 1 HETATM 8 O O1 6G5 . . . E 2 -18.621 44.125 -81.202 1 77.91 0 O1 6G5 401 A 1 HETATM 9 C C11 6G5 . . . E 2 -17.45 44.018 -81.624 1 77.56 0 C11 6G5 401 A 1 HETATM 10 O O2 6G5 . . . E 2 -17.12 43.516 -82.716 1 72.11 0 O2 6G5 401 A 1 HETATM 11 N N2 6G5 . . . E 2 -16.842 45.694 -79.901 1 83.28 0 N2 6G5 401 A 1 HETATM 12 C C9 6G5 . . . E 2 -15.527 43.571 -79.976 1 80.42 0 C9 6G5 401 A 1 HETATM 13 C C1 6G5 . . . E 2 -14.887 43.855 -76.857 1 80.29 0 C1 6G5 401 A 1 HETATM 14 CL CL1 6G5 . . . E 2 -13.603 44.606 -77.731 1 91.11 0 CL1 6G5 401 A 1 HETATM 15 C C2 6G5 . . . E 2 -14.787 43.882 -75.474 1 76.41 0 C2 6G5 401 A 1 HETATM 16 C C3 6G5 . . . E 2 -15.786 43.294 -74.72 1 77.8 0 C3 6G5 401 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #