data_7RNS # _model_server_result.job_id zL1Sn6IGT-yN7bYcbxy6Zg _model_server_result.datetime_utc '2024-11-19 20:53:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rns # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":505}' # _entry.id 7RNS # _exptl.entry_id 7RNS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RNS _cell.length_a 43.795 _cell.length_b 46.536 _cell.length_c 50.089 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RNS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C SER 3 B SER 52 1_555 B N PTR 4 B PTR 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 B C PTR 4 B PTR 53 1_555 B N VAL 5 B VAL 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 7RNS _atom_sites.fract_transf_matrix[1][1] 0.022834 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021489 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019964 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 501 1 EDO EDO . D 3 EDO A 1 502 2 EDO EDO . E 3 EDO A 1 503 3 EDO EDO . F 3 EDO A 1 504 4 EDO EDO . G 3 EDO A 1 505 5 EDO EDO . H 3 EDO A 1 506 6 EDO EDO . I 4 HOH A 1 601 59 HOH HOH . I 4 HOH A 2 602 205 HOH HOH . I 4 HOH A 3 603 192 HOH HOH . I 4 HOH A 4 604 139 HOH HOH . I 4 HOH A 5 605 112 HOH HOH . I 4 HOH A 6 606 203 HOH HOH . I 4 HOH A 7 607 180 HOH HOH . I 4 HOH A 8 608 102 HOH HOH . I 4 HOH A 9 609 99 HOH HOH . I 4 HOH A 10 610 165 HOH HOH . I 4 HOH A 11 611 177 HOH HOH . I 4 HOH A 12 612 32 HOH HOH . I 4 HOH A 13 613 90 HOH HOH . I 4 HOH A 14 614 166 HOH HOH . I 4 HOH A 15 615 23 HOH HOH . I 4 HOH A 16 616 61 HOH HOH . I 4 HOH A 17 617 138 HOH HOH . I 4 HOH A 18 618 204 HOH HOH . I 4 HOH A 19 619 121 HOH HOH . I 4 HOH A 20 620 170 HOH HOH . I 4 HOH A 21 621 25 HOH HOH . I 4 HOH A 22 622 100 HOH HOH . I 4 HOH A 23 623 115 HOH HOH . I 4 HOH A 24 624 184 HOH HOH . I 4 HOH A 25 625 15 HOH HOH . I 4 HOH A 26 626 126 HOH HOH . I 4 HOH A 27 627 114 HOH HOH . I 4 HOH A 28 628 72 HOH HOH . I 4 HOH A 29 629 176 HOH HOH . I 4 HOH A 30 630 107 HOH HOH . I 4 HOH A 31 631 18 HOH HOH . I 4 HOH A 32 632 36 HOH HOH . I 4 HOH A 33 633 111 HOH HOH . I 4 HOH A 34 634 163 HOH HOH . I 4 HOH A 35 635 167 HOH HOH . I 4 HOH A 36 636 182 HOH HOH . I 4 HOH A 37 637 198 HOH HOH . I 4 HOH A 38 638 95 HOH HOH . I 4 HOH A 39 639 48 HOH HOH . I 4 HOH A 40 640 159 HOH HOH . I 4 HOH A 41 641 57 HOH HOH . I 4 HOH A 42 642 12 HOH HOH . I 4 HOH A 43 643 92 HOH HOH . I 4 HOH A 44 644 155 HOH HOH . I 4 HOH A 45 645 97 HOH HOH . I 4 HOH A 46 646 76 HOH HOH . I 4 HOH A 47 647 87 HOH HOH . I 4 HOH A 48 648 181 HOH HOH . I 4 HOH A 49 649 131 HOH HOH . I 4 HOH A 50 650 30 HOH HOH . I 4 HOH A 51 651 202 HOH HOH . I 4 HOH A 52 652 16 HOH HOH . I 4 HOH A 53 653 66 HOH HOH . I 4 HOH A 54 654 148 HOH HOH . I 4 HOH A 55 655 4 HOH HOH . I 4 HOH A 56 656 125 HOH HOH . I 4 HOH A 57 657 89 HOH HOH . I 4 HOH A 58 658 54 HOH HOH . I 4 HOH A 59 659 171 HOH HOH . I 4 HOH A 60 660 56 HOH HOH . I 4 HOH A 61 661 51 HOH HOH . I 4 HOH A 62 662 86 HOH HOH . I 4 HOH A 63 663 21 HOH HOH . I 4 HOH A 64 664 124 HOH HOH . I 4 HOH A 65 665 58 HOH HOH . I 4 HOH A 66 666 17 HOH HOH . I 4 HOH A 67 667 117 HOH HOH . I 4 HOH A 68 668 40 HOH HOH . I 4 HOH A 69 669 120 HOH HOH . I 4 HOH A 70 670 83 HOH HOH . I 4 HOH A 71 671 5 HOH HOH . I 4 HOH A 72 672 62 HOH HOH . I 4 HOH A 73 673 31 HOH HOH . I 4 HOH A 74 674 43 HOH HOH . I 4 HOH A 75 675 3 HOH HOH . I 4 HOH A 76 676 13 HOH HOH . I 4 HOH A 77 677 22 HOH HOH . I 4 HOH A 78 678 85 HOH HOH . I 4 HOH A 79 679 52 HOH HOH . I 4 HOH A 80 680 116 HOH HOH . I 4 HOH A 81 681 64 HOH HOH . I 4 HOH A 82 682 123 HOH HOH . I 4 HOH A 83 683 71 HOH HOH . I 4 HOH A 84 684 45 HOH HOH . I 4 HOH A 85 685 20 HOH HOH . I 4 HOH A 86 686 143 HOH HOH . I 4 HOH A 87 687 93 HOH HOH . I 4 HOH A 88 688 130 HOH HOH . I 4 HOH A 89 689 53 HOH HOH . I 4 HOH A 90 690 84 HOH HOH . I 4 HOH A 91 691 119 HOH HOH . I 4 HOH A 92 692 174 HOH HOH . I 4 HOH A 93 693 113 HOH HOH . I 4 HOH A 94 694 67 HOH HOH . I 4 HOH A 95 695 41 HOH HOH . I 4 HOH A 96 696 178 HOH HOH . I 4 HOH A 97 697 6 HOH HOH . I 4 HOH A 98 698 132 HOH HOH . I 4 HOH A 99 699 2 HOH HOH . I 4 HOH A 100 700 70 HOH HOH . I 4 HOH A 101 701 28 HOH HOH . I 4 HOH A 102 702 39 HOH HOH . I 4 HOH A 103 703 63 HOH HOH . I 4 HOH A 104 704 7 HOH HOH . I 4 HOH A 105 705 200 HOH HOH . I 4 HOH A 106 706 8 HOH HOH . I 4 HOH A 107 707 110 HOH HOH . I 4 HOH A 108 708 46 HOH HOH . I 4 HOH A 109 709 94 HOH HOH . I 4 HOH A 110 710 35 HOH HOH . I 4 HOH A 111 711 188 HOH HOH . I 4 HOH A 112 712 82 HOH HOH . I 4 HOH A 113 713 122 HOH HOH . I 4 HOH A 114 714 44 HOH HOH . I 4 HOH A 115 715 118 HOH HOH . I 4 HOH A 116 716 34 HOH HOH . I 4 HOH A 117 717 134 HOH HOH . I 4 HOH A 118 718 108 HOH HOH . I 4 HOH A 119 719 47 HOH HOH . I 4 HOH A 120 720 128 HOH HOH . I 4 HOH A 121 721 29 HOH HOH . I 4 HOH A 122 722 189 HOH HOH . I 4 HOH A 123 723 136 HOH HOH . I 4 HOH A 124 724 50 HOH HOH . I 4 HOH A 125 725 149 HOH HOH . I 4 HOH A 126 726 91 HOH HOH . I 4 HOH A 127 727 49 HOH HOH . I 4 HOH A 128 728 156 HOH HOH . I 4 HOH A 129 729 152 HOH HOH . I 4 HOH A 130 730 81 HOH HOH . I 4 HOH A 131 731 109 HOH HOH . I 4 HOH A 132 732 183 HOH HOH . I 4 HOH A 133 733 27 HOH HOH . I 4 HOH A 134 734 88 HOH HOH . I 4 HOH A 135 735 24 HOH HOH . I 4 HOH A 136 736 164 HOH HOH . I 4 HOH A 137 737 133 HOH HOH . I 4 HOH A 138 738 151 HOH HOH . I 4 HOH A 139 739 73 HOH HOH . I 4 HOH A 140 740 42 HOH HOH . I 4 HOH A 141 741 127 HOH HOH . I 4 HOH A 142 742 65 HOH HOH . I 4 HOH A 143 743 150 HOH HOH . I 4 HOH A 144 744 162 HOH HOH . I 4 HOH A 145 745 186 HOH HOH . I 4 HOH A 146 746 185 HOH HOH . I 4 HOH A 147 747 157 HOH HOH . I 4 HOH A 148 748 78 HOH HOH . I 4 HOH A 149 749 38 HOH HOH . I 4 HOH A 150 750 194 HOH HOH . I 4 HOH A 151 751 206 HOH HOH . I 4 HOH A 152 752 173 HOH HOH . I 4 HOH A 153 753 140 HOH HOH . I 4 HOH A 154 754 98 HOH HOH . I 4 HOH A 155 755 79 HOH HOH . I 4 HOH A 156 756 195 HOH HOH . I 4 HOH A 157 757 74 HOH HOH . I 4 HOH A 158 758 207 HOH HOH . I 4 HOH A 159 759 135 HOH HOH . I 4 HOH A 160 760 26 HOH HOH . I 4 HOH A 161 761 105 HOH HOH . I 4 HOH A 162 762 14 HOH HOH . I 4 HOH A 163 763 129 HOH HOH . I 4 HOH A 164 764 144 HOH HOH . I 4 HOH A 165 765 96 HOH HOH . I 4 HOH A 166 766 104 HOH HOH . I 4 HOH A 167 767 153 HOH HOH . I 4 HOH A 168 768 77 HOH HOH . I 4 HOH A 169 769 175 HOH HOH . I 4 HOH A 170 770 141 HOH HOH . I 4 HOH A 171 771 160 HOH HOH . I 4 HOH A 172 772 168 HOH HOH . I 4 HOH A 173 773 142 HOH HOH . J 4 HOH B 1 101 179 HOH HOH . J 4 HOH B 2 102 19 HOH HOH . J 4 HOH B 3 103 191 HOH HOH . J 4 HOH B 4 104 60 HOH HOH . J 4 HOH B 5 105 145 HOH HOH . J 4 HOH B 6 106 37 HOH HOH . J 4 HOH B 7 107 10 HOH HOH . J 4 HOH B 8 108 147 HOH HOH . J 4 HOH B 9 109 11 HOH HOH . J 4 HOH B 10 110 69 HOH HOH . J 4 HOH B 11 111 187 HOH HOH . J 4 HOH B 12 112 146 HOH HOH . J 4 HOH B 13 113 9 HOH HOH . J 4 HOH B 14 114 154 HOH HOH . J 4 HOH B 15 115 1 HOH HOH . J 4 HOH B 16 116 137 HOH HOH . J 4 HOH B 17 117 106 HOH HOH . J 4 HOH B 18 118 33 HOH HOH . J 4 HOH B 19 119 172 HOH HOH . J 4 HOH B 20 120 193 HOH HOH . J 4 HOH B 21 121 161 HOH HOH . J 4 HOH B 22 122 80 HOH HOH . J 4 HOH B 23 123 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 3 16.631 -20.612 -21.579 1 27.83 ? C1 EDO 505 A 1 HETATM 2 O O1 EDO . . . G 3 15.612 -21.066 -20.692 1 27.9 ? O1 EDO 505 A 1 HETATM 3 C C2 EDO . . . G 3 17.351 -21.821 -22.152 1 28.22 ? C2 EDO 505 A 1 HETATM 4 O O2 EDO . . . G 3 18.752 -21.742 -21.862 1 28.08 ? O2 EDO 505 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #