data_7ROY
#
_model_server_result.job_id            yWjiqToDJOWi3HRYN5Gq6A 
_model_server_result.datetime_utc      '2025-07-30 14:29:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7roy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":401}' 
#
_entry.id    7ROY 
#
_exptl.entry_id    7ROY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7ROY 
_cell.length_a            164.475 
_cell.length_b            164.475 
_cell.length_c            465.39 
_cell.Z_PDB               64 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ROY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    'I 4 2' 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,G,H,N,O,P,Q,S,V 1 1 
B,C,F,I,J,K,L,M,R,T,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 I N N 
? 3 L N N 
? 3 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 189 A HIS 185 1_555 Q ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc2 A SG CYS 190 A CYS 186 1_555 H ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc3 A NE2 HIS 222 A HIS 218 1_555 H ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc4 H ZN ZN . A ZN 402 1_555 E SG CYS 22 G CYS 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc5 H ZN ZN . A ZN 402 1_555 E SG CYS 25 G CYS 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc6 B SG CYS 190 B CYS 186 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc7 C NE2 HIS 189 C HIS 185 1_555 R ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc8 C SG CYS 190 C CYS 186 1_555 M ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc9 C NE2 HIS 222 C HIS 218 1_555 M ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc10 M ZN ZN . C ZN 402 1_555 F SG CYS 22 H CYS 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc11 M ZN ZN . C ZN 402 1_555 F SG CYS 25 H CYS 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc12 D SG CYS 190 D CYS 186 1_555 O ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc13 E SG CYS 20 G CYS 580 1_555 Q ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? 
metalc ? metalc14 E SG CYS 25 G CYS 585 1_555 Q ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc15 E NE2 HIS 27 G HIS 587 1_555 Q ZN ZN . G ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc16 F SG CYS 20 H CYS 580 1_555 R ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc17 F SG CYS 25 H CYS 585 1_555 R ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc18 F NE2 HIS 27 H HIS 587 1_555 R ZN ZN . H ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     7ROY 
_atom_sites.fract_transf_matrix[1][1]    0.00608 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00608 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002149 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 EPE A 1 401 502 EPE EPE . 
H 4 ZN A 1 402 1002 ZN ZN . 
I 3 EPE B 1 401 502 EPE EPE . 
J 4 ZN B 1 402 1001 ZN ZN . 
K 4 ZN B 1 403 1002 ZN ZN . 
L 3 EPE C 1 401 502 EPE EPE . 
M 4 ZN C 1 402 1002 ZN ZN . 
N 3 EPE D 1 401 502 EPE EPE . 
O 4 ZN D 1 402 1001 ZN ZN . 
P 4 ZN D 1 403 1002 ZN ZN . 
Q 4 ZN G 1 1001 1001 ZN ZN . 
R 4 ZN H 1 1001 1001 ZN ZN . 
S 5 HOH A 1 501 15 HOH HOH . 
S 5 HOH A 2 502 16 HOH HOH . 
S 5 HOH A 3 503 10 HOH HOH . 
T 5 HOH B 1 501 14 HOH HOH . 
T 5 HOH B 2 502 17 HOH HOH . 
T 5 HOH B 3 503 5 HOH HOH . 
T 5 HOH B 4 504 2 HOH HOH . 
T 5 HOH B 5 505 6 HOH HOH . 
T 5 HOH B 6 506 4 HOH HOH . 
T 5 HOH B 7 507 8 HOH HOH . 
U 5 HOH C 1 501 11 HOH HOH . 
U 5 HOH C 2 502 7 HOH HOH . 
U 5 HOH C 3 503 9 HOH HOH . 
U 5 HOH C 4 504 12 HOH HOH . 
U 5 HOH C 5 505 13 HOH HOH . 
V 5 HOH D 1 501 3 HOH HOH . 
V 5 HOH D 2 502 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . N 3 -9.076 29.571 36.657 1 104.35 ? N1 EPE 401 D 1 
HETATM 2 C C2 EPE . . . N 3 -10.442 29.681 37.186 1 111.74 ? C2 EPE 401 D 1 
HETATM 3 C C3 EPE . . . N 3 -10.63 31.064 37.804 1 123.36 ? C3 EPE 401 D 1 
HETATM 4 N N4 EPE . . . N 3 -9.547 31.452 38.693 1 109.67 ? N4 EPE 401 D 1 
HETATM 5 C C5 EPE . . . N 3 -8.191 31.044 38.371 1 101.43 ? C5 EPE 401 D 1 
HETATM 6 C C6 EPE . . . N 3 -8.126 29.644 37.774 1 105.13 ? C6 EPE 401 D 1 
HETATM 7 C C7 EPE . . . N 3 -9.707 32.669 39.465 1 96.2 ? C7 EPE 401 D 1 
HETATM 8 C C8 EPE . . . N 3 -11.097 32.798 40.076 1 103.33 ? C8 EPE 401 D 1 
HETATM 9 O O8 EPE . . . N 3 -11.32 34.14 40.448 1 103.18 ? O8 EPE 401 D 1 
HETATM 10 C C9 EPE . . . N 3 -8.906 28.302 35.934 1 95.17 ? C9 EPE 401 D 1 
HETATM 11 C C10 EPE . . . N 3 -8.824 28.586 34.439 1 90.17 ? C10 EPE 401 D 1 
HETATM 12 S S EPE . . . N 3 -8.363 27.127 33.473 1 100.76 ? S EPE 401 D 1 
HETATM 13 O O1S EPE . . . N 3 -6.918 26.93 33.549 1 80.53 ? O1S EPE 401 D 1 
HETATM 14 O O2S EPE . . . N 3 -8.747 27.325 32.078 1 104.71 ? O2S EPE 401 D 1 
HETATM 15 O O3S EPE . . . N 3 -9.047 25.951 34.004 1 87.34 ? O3S EPE 401 D 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           15 
#