data_7RP2
#
_model_server_result.job_id            2hZ3KV1rN6_C2nD1ue-qKQ 
_model_server_result.datetime_utc      '2024-12-01 00:20:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rp2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":302}' 
#
_entry.id    7RP2 
#
_exptl.entry_id    7RP2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          114.08 
_cell.angle_gamma         90 
_cell.entry_id            7RP2 
_cell.length_a            149.918 
_cell.length_b            68.796 
_cell.length_c            101.002 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RP2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
disulf ? disulf2 B SG CYS 149 H CYS 140 1_555 B SG CYS 205 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf3 B SG CYS 225 H CYS 216 1_555 C SG CYS 214 I CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf4 C SG CYS 21 I CYS 23 1_555 C SG CYS 88 I CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
disulf ? disulf5 C SG CYS 137 I CYS 135 1_555 C SG CYS 196 I CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc1 A OG SER 18 A SER 17 1_555 E MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc2 D O1B GDP . A GDP 201 1_555 E MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc3 E MG MG . A MG 202 1_555 J O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc4 E MG MG . A MG 202 1_555 J O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc5 E MG MG . A MG 202 1_555 J O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc6 E MG MG . A MG 202 1_555 J O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 93 n n 
C1 C2 EDO sing 94 n n 
C1 H11 EDO sing 95 n n 
C1 H12 EDO sing 96 n n 
O1 HO1 EDO sing 97 n n 
C2 O2 EDO sing 98 n n 
C2 H21 EDO sing 99 n n 
C2 H22 EDO sing 100 n n 
O2 HO2 EDO sing 101 n n 
#
_atom_sites.entry_id                     7RP2 
_atom_sites.fract_transf_matrix[1][1]    0.00667 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002981 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014536 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010845 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 GDP A 1 201 1 GDP GDP . 
E 5 MG A 1 202 3 MG MG . 
F 6 CAC H 1 301 5 CAC CAC . 
G 7 EDO H 1 302 7 EDO EDO . 
H 6 CAC I 1 301 4 CAC CAC . 
I 6 CAC I 1 302 6 CAC CAC . 
J 8 HOH A 1 301 81 HOH HOH . 
J 8 HOH A 2 302 32 HOH HOH . 
J 8 HOH A 3 303 34 HOH HOH . 
J 8 HOH A 4 304 31 HOH HOH . 
J 8 HOH A 5 305 33 HOH HOH . 
J 8 HOH A 6 306 33 HOH HOH . 
J 8 HOH A 7 307 89 HOH HOH . 
K 8 HOH H 1 401 110 HOH HOH . 
K 8 HOH H 2 402 79 HOH HOH . 
K 8 HOH H 3 403 25 HOH HOH . 
K 8 HOH H 4 404 73 HOH HOH . 
K 8 HOH H 5 405 46 HOH HOH . 
K 8 HOH H 6 406 14 HOH HOH . 
K 8 HOH H 7 407 91 HOH HOH . 
K 8 HOH H 8 408 28 HOH HOH . 
K 8 HOH H 9 409 71 HOH HOH . 
K 8 HOH H 10 410 53 HOH HOH . 
K 8 HOH H 11 411 57 HOH HOH . 
K 8 HOH H 12 412 72 HOH HOH . 
K 8 HOH H 13 413 4 HOH HOH . 
K 8 HOH H 14 414 56 HOH HOH . 
K 8 HOH H 15 415 17 HOH HOH . 
K 8 HOH H 16 416 109 HOH HOH . 
K 8 HOH H 17 417 90 HOH HOH . 
K 8 HOH H 18 418 50 HOH HOH . 
K 8 HOH H 19 419 58 HOH HOH . 
K 8 HOH H 20 420 86 HOH HOH . 
K 8 HOH H 21 421 1 HOH HOH . 
K 8 HOH H 22 422 75 HOH HOH . 
K 8 HOH H 23 423 107 HOH HOH . 
K 8 HOH H 24 424 31 HOH HOH . 
K 8 HOH H 25 425 10 HOH HOH . 
K 8 HOH H 26 426 60 HOH HOH . 
K 8 HOH H 27 427 52 HOH HOH . 
K 8 HOH H 28 428 13 HOH HOH . 
K 8 HOH H 29 429 94 HOH HOH . 
K 8 HOH H 30 430 12 HOH HOH . 
K 8 HOH H 31 431 93 HOH HOH . 
K 8 HOH H 32 432 3 HOH HOH . 
K 8 HOH H 33 433 105 HOH HOH . 
K 8 HOH H 34 434 103 HOH HOH . 
K 8 HOH H 35 435 85 HOH HOH . 
K 8 HOH H 36 436 61 HOH HOH . 
K 8 HOH H 37 437 111 HOH HOH . 
K 8 HOH H 38 438 18 HOH HOH . 
K 8 HOH H 39 439 104 HOH HOH . 
K 8 HOH H 40 440 59 HOH HOH . 
K 8 HOH H 41 441 108 HOH HOH . 
K 8 HOH H 42 442 47 HOH HOH . 
K 8 HOH H 43 443 98 HOH HOH . 
K 8 HOH H 44 444 66 HOH HOH . 
K 8 HOH H 45 445 11 HOH HOH . 
K 8 HOH H 46 446 82 HOH HOH . 
K 8 HOH H 47 447 41 HOH HOH . 
K 8 HOH H 48 448 32 HOH HOH . 
K 8 HOH H 49 449 70 HOH HOH . 
K 8 HOH H 50 450 5 HOH HOH . 
K 8 HOH H 51 451 23 HOH HOH . 
K 8 HOH H 52 452 55 HOH HOH . 
K 8 HOH H 53 453 83 HOH HOH . 
K 8 HOH H 54 454 78 HOH HOH . 
K 8 HOH H 55 455 64 HOH HOH . 
K 8 HOH H 56 456 74 HOH HOH . 
K 8 HOH H 57 457 87 HOH HOH . 
K 8 HOH H 58 458 100 HOH HOH . 
L 8 HOH I 1 401 106 HOH HOH . 
L 8 HOH I 2 402 99 HOH HOH . 
L 8 HOH I 3 403 8 HOH HOH . 
L 8 HOH I 4 404 2 HOH HOH . 
L 8 HOH I 5 405 6 HOH HOH . 
L 8 HOH I 6 406 30 HOH HOH . 
L 8 HOH I 7 407 7 HOH HOH . 
L 8 HOH I 8 408 49 HOH HOH . 
L 8 HOH I 9 409 77 HOH HOH . 
L 8 HOH I 10 410 40 HOH HOH . 
L 8 HOH I 11 411 45 HOH HOH . 
L 8 HOH I 12 412 92 HOH HOH . 
L 8 HOH I 13 413 39 HOH HOH . 
L 8 HOH I 14 414 9 HOH HOH . 
L 8 HOH I 15 415 24 HOH HOH . 
L 8 HOH I 16 416 20 HOH HOH . 
L 8 HOH I 17 417 51 HOH HOH . 
L 8 HOH I 18 418 88 HOH HOH . 
L 8 HOH I 19 419 26 HOH HOH . 
L 8 HOH I 20 420 44 HOH HOH . 
L 8 HOH I 21 421 43 HOH HOH . 
L 8 HOH I 22 422 102 HOH HOH . 
L 8 HOH I 23 423 34 HOH HOH . 
L 8 HOH I 24 424 68 HOH HOH . 
L 8 HOH I 25 425 69 HOH HOH . 
L 8 HOH I 26 426 38 HOH HOH . 
L 8 HOH I 27 427 15 HOH HOH . 
L 8 HOH I 28 428 54 HOH HOH . 
L 8 HOH I 29 429 42 HOH HOH . 
L 8 HOH I 30 430 21 HOH HOH . 
L 8 HOH I 31 431 62 HOH HOH . 
L 8 HOH I 32 432 22 HOH HOH . 
L 8 HOH I 33 433 65 HOH HOH . 
L 8 HOH I 34 434 97 HOH HOH . 
L 8 HOH I 35 435 76 HOH HOH . 
L 8 HOH I 36 436 101 HOH HOH . 
L 8 HOH I 37 437 48 HOH HOH . 
L 8 HOH I 38 438 80 HOH HOH . 
L 8 HOH I 39 439 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 7 -16.05 38.16 11.022 1 214.81 ? C1 EDO 302 H 1 
HETATM 2 O O1 EDO . . . G 7 -16.64 36.87 10.832 1 213.68 ? O1 EDO 302 H 1 
HETATM 3 C C2 EDO . . . G 7 -15.334 38.394 9.745 1 214.68 ? C2 EDO 302 H 1 
HETATM 4 O O2 EDO . . . G 7 -15.188 39.793 9.476 1 209.29 ? O2 EDO 302 H 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           4 
#