data_7RP4 # _model_server_result.job_id ONfJkTvEuatalFN8AMNlxg _model_server_result.datetime_utc '2024-11-28 03:08:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rp4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 7RP4 # _exptl.entry_id 7RP4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 88.97 _cell.angle_beta 84.94 _cell.angle_gamma 80.01 _cell.entry_id 7RP4 _cell.length_a 33.586 _cell.length_b 43.985 _cell.length_c 65.305 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RP4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 C C MKZ . A MKZ 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? covale ? covale2 B SG CYS 13 B CYS 12 1_555 F C MKZ . B MKZ 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 E MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc2 D O2B GDP . A GDP 202 1_555 E MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc3 E MG MG . A MG 203 1_555 J O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc4 E MG MG . A MG 203 1_555 J O HOH . A HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc5 E MG MG . A MG 203 1_555 J O HOH . A HOH 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc6 E MG MG . A MG 203 1_555 J O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc7 B OG SER 18 B SER 17 1_555 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc8 G O1B GDP . B GDP 202 1_555 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc9 H MG MG . B MG 203 1_555 K O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc10 H MG MG . B MG 203 1_555 K O HOH . B HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc11 H MG MG . B MG 203 1_555 K O HOH . B HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc12 H MG MG . B MG 203 1_555 K O HOH . B HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7RP4 _atom_sites.fract_transf_matrix[1][1] 0.029774 _atom_sites.fract_transf_matrix[1][2] -0.005244 _atom_sites.fract_transf_matrix[1][3] -0.002623 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023085 _atom_sites.fract_transf_matrix[2][3] -0.000063 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MKZ A 1 201 1 MKZ LIG . D 3 GDP A 1 202 3 GDP GDP . E 4 MG A 1 203 5 MG MG . F 2 MKZ B 1 201 2 MKZ LIG . G 3 GDP B 1 202 4 GDP GDP . H 4 MG B 1 203 6 MG MG . I 5 GOL B 1 204 1 GOL GOL . J 6 HOH A 1 301 115 HOH HOH . J 6 HOH A 2 302 51 HOH WAT . J 6 HOH A 3 303 114 HOH HOH . J 6 HOH A 4 304 78 HOH HOH . J 6 HOH A 5 305 161 HOH HOH . J 6 HOH A 6 306 143 HOH HOH . J 6 HOH A 7 307 81 HOH HOH . J 6 HOH A 8 308 71 HOH HOH . J 6 HOH A 9 309 80 HOH HOH . J 6 HOH A 10 310 58 HOH HOH . J 6 HOH A 11 311 25 HOH HOH . J 6 HOH A 12 312 2 HOH HOH . J 6 HOH A 13 313 134 HOH HOH . J 6 HOH A 14 314 137 HOH HOH . J 6 HOH A 15 315 17 HOH HOH . J 6 HOH A 16 316 11 HOH HOH . J 6 HOH A 17 317 13 HOH HOH . J 6 HOH A 18 318 52 HOH WAT . J 6 HOH A 19 319 119 HOH HOH . J 6 HOH A 20 320 23 HOH HOH . J 6 HOH A 21 321 52 HOH HOH . J 6 HOH A 22 322 36 HOH HOH . J 6 HOH A 23 323 53 HOH WAT . J 6 HOH A 24 324 65 HOH HOH . J 6 HOH A 25 325 6 HOH HOH . J 6 HOH A 26 326 10 HOH HOH . J 6 HOH A 27 327 151 HOH HOH . J 6 HOH A 28 328 69 HOH HOH . J 6 HOH A 29 329 42 HOH HOH . J 6 HOH A 30 330 93 HOH HOH . J 6 HOH A 31 331 16 HOH HOH . J 6 HOH A 32 332 122 HOH HOH . J 6 HOH A 33 333 54 HOH WAT . J 6 HOH A 34 334 85 HOH HOH . J 6 HOH A 35 335 127 HOH HOH . J 6 HOH A 36 336 63 HOH HOH . J 6 HOH A 37 337 120 HOH HOH . J 6 HOH A 38 338 147 HOH HOH . J 6 HOH A 39 339 64 HOH HOH . J 6 HOH A 40 340 110 HOH HOH . J 6 HOH A 41 341 123 HOH HOH . J 6 HOH A 42 342 61 HOH HOH . J 6 HOH A 43 343 88 HOH HOH . J 6 HOH A 44 344 89 HOH HOH . J 6 HOH A 45 345 5 HOH HOH . J 6 HOH A 46 346 155 HOH HOH . J 6 HOH A 47 347 39 HOH HOH . J 6 HOH A 48 348 138 HOH HOH . J 6 HOH A 49 349 26 HOH HOH . J 6 HOH A 50 350 86 HOH HOH . J 6 HOH A 51 351 107 HOH HOH . J 6 HOH A 52 352 100 HOH HOH . J 6 HOH A 53 353 9 HOH HOH . J 6 HOH A 54 354 90 HOH HOH . J 6 HOH A 55 355 156 HOH HOH . J 6 HOH A 56 356 96 HOH HOH . J 6 HOH A 57 357 159 HOH HOH . J 6 HOH A 58 358 144 HOH HOH . J 6 HOH A 59 359 98 HOH HOH . J 6 HOH A 60 360 148 HOH HOH . J 6 HOH A 61 361 54 HOH HOH . J 6 HOH A 62 362 35 HOH HOH . J 6 HOH A 63 363 132 HOH HOH . J 6 HOH A 64 364 130 HOH HOH . J 6 HOH A 65 365 24 HOH HOH . J 6 HOH A 66 366 125 HOH HOH . J 6 HOH A 67 367 152 HOH HOH . J 6 HOH A 68 368 53 HOH HOH . J 6 HOH A 69 369 158 HOH HOH . J 6 HOH A 70 370 111 HOH HOH . J 6 HOH A 71 371 106 HOH HOH . J 6 HOH A 72 372 128 HOH HOH . J 6 HOH A 73 373 50 HOH HOH . J 6 HOH A 74 374 149 HOH HOH . J 6 HOH A 75 375 94 HOH HOH . J 6 HOH A 76 376 157 HOH HOH . K 6 HOH B 1 301 97 HOH HOH . K 6 HOH B 2 302 34 HOH HOH . K 6 HOH B 3 303 61 HOH WAT . K 6 HOH B 4 304 99 HOH HOH . K 6 HOH B 5 305 8 HOH HOH . K 6 HOH B 6 306 59 HOH HOH . K 6 HOH B 7 307 41 HOH HOH . K 6 HOH B 8 308 84 HOH HOH . K 6 HOH B 9 309 49 HOH HOH . K 6 HOH B 10 310 79 HOH HOH . K 6 HOH B 11 311 64 HOH WAT . K 6 HOH B 12 312 124 HOH HOH . K 6 HOH B 13 313 51 HOH HOH . K 6 HOH B 14 314 4 HOH HOH . K 6 HOH B 15 315 12 HOH HOH . K 6 HOH B 16 316 62 HOH WAT . K 6 HOH B 17 317 60 HOH HOH . K 6 HOH B 18 318 63 HOH WAT . K 6 HOH B 19 319 91 HOH HOH . K 6 HOH B 20 320 103 HOH HOH . K 6 HOH B 21 321 43 HOH HOH . K 6 HOH B 22 322 31 HOH HOH . K 6 HOH B 23 323 27 HOH HOH . K 6 HOH B 24 324 145 HOH HOH . K 6 HOH B 25 325 75 HOH HOH . K 6 HOH B 26 326 3 HOH HOH . K 6 HOH B 27 327 109 HOH HOH . K 6 HOH B 28 328 29 HOH HOH . K 6 HOH B 29 329 40 HOH HOH . K 6 HOH B 30 330 37 HOH HOH . K 6 HOH B 31 331 14 HOH HOH . K 6 HOH B 32 332 48 HOH HOH . K 6 HOH B 33 333 73 HOH HOH . K 6 HOH B 34 334 95 HOH HOH . K 6 HOH B 35 335 44 HOH HOH . K 6 HOH B 36 336 56 HOH HOH . K 6 HOH B 37 337 72 HOH HOH . K 6 HOH B 38 338 15 HOH HOH . K 6 HOH B 39 339 7 HOH HOH . K 6 HOH B 40 340 153 HOH HOH . K 6 HOH B 41 341 55 HOH HOH . K 6 HOH B 42 342 68 HOH HOH . K 6 HOH B 43 343 82 HOH HOH . K 6 HOH B 44 344 70 HOH HOH . K 6 HOH B 45 345 116 HOH HOH . K 6 HOH B 46 346 141 HOH HOH . K 6 HOH B 47 347 62 HOH HOH . K 6 HOH B 48 348 135 HOH HOH . K 6 HOH B 49 349 142 HOH HOH . K 6 HOH B 50 350 113 HOH HOH . K 6 HOH B 51 351 101 HOH HOH . K 6 HOH B 52 352 118 HOH HOH . K 6 HOH B 53 353 22 HOH HOH . K 6 HOH B 54 354 30 HOH HOH . K 6 HOH B 55 355 108 HOH HOH . K 6 HOH B 56 356 126 HOH HOH . K 6 HOH B 57 357 87 HOH HOH . K 6 HOH B 58 358 133 HOH HOH . K 6 HOH B 59 359 139 HOH HOH . K 6 HOH B 60 360 45 HOH HOH . K 6 HOH B 61 361 160 HOH HOH . K 6 HOH B 62 362 140 HOH HOH . K 6 HOH B 63 363 121 HOH HOH . K 6 HOH B 64 364 129 HOH HOH . K 6 HOH B 65 365 154 HOH HOH . K 6 HOH B 66 366 32 HOH HOH . K 6 HOH B 67 367 18 HOH HOH . K 6 HOH B 68 368 66 HOH HOH . K 6 HOH B 69 369 104 HOH HOH . K 6 HOH B 70 370 131 HOH HOH . K 6 HOH B 71 371 83 HOH HOH . K 6 HOH B 72 372 150 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -2.097 _atom_site.Cartn_y 13.29 _atom_site.Cartn_z 12.421 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #