data_7RP8 # _model_server_result.job_id wbXe6VYKmI9HTyE2rUuGGg _model_server_result.datetime_utc '2024-11-24 18:35:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rp8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7RP8 # _exptl.entry_id 7RP8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.362 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Imipenem _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RP8 _cell.length_a 102.164 _cell.length_b 102.164 _cell.length_c 85.657 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 51 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 81 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C7 _struct_conn.ptnr2_label_comp_id ID1 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ID1 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.488 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C12 H19 N3 O4 S' _chem_comp.formula_weight 301.362 _chem_comp.id ID1 _chem_comp.mon_nstd_flag . _chem_comp.name Imipenem _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O31 C31 ID1 doub 139 n n C31 O32 ID1 sing 140 n n C31 C3 ID1 sing 141 n n C7 C6 ID1 sing 142 n n C7 O7 ID1 doub 143 n n C3 N4 ID1 doub 144 n n C3 C2 ID1 sing 145 n n N4 C5 ID1 sing 146 n n S21 C2 ID1 sing 147 n n S21 C22 ID1 sing 148 n n C6 C5 ID1 sing 149 n n C6 C61 ID1 sing 150 n n C62 C61 ID1 sing 151 n n C2 C1 ID1 sing 152 n n C5 C1 ID1 sing 153 n n C61 O62 ID1 sing 154 n n C22 C23 ID1 sing 155 n n N24 C23 ID1 sing 156 n n N24 C25 ID1 doub 157 n n C25 N26 ID1 sing 158 n n C7 H1 ID1 sing 159 n n C2 H2 ID1 sing 160 n n C6 H3 ID1 sing 161 n n C5 H4 ID1 sing 162 n n C61 H6 ID1 sing 163 n n O62 H7 ID1 sing 164 n n C62 H8 ID1 sing 165 n n C62 H9 ID1 sing 166 n n C62 H10 ID1 sing 167 n n O32 H13 ID1 sing 168 n n C22 H14 ID1 sing 169 n n C22 H15 ID1 sing 170 n n C23 H16 ID1 sing 171 n n C23 H17 ID1 sing 172 n n C25 H18 ID1 sing 173 n n N26 H19 ID1 sing 174 n n N26 H20 ID1 sing 175 n n C1 H21 ID1 sing 176 n n C1 H22 ID1 sing 177 n n # _atom_sites.entry_id 7RP8 _atom_sites.fract_transf_matrix[1][1] 0.009788 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011674 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ID1 A 1 301 301 ID1 ID1 . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 3 SO4 A 1 304 3 SO4 SO4 . F 3 SO4 A 1 305 4 SO4 SO4 . G 4 HOH A 1 401 2 HOH HOH . G 4 HOH A 2 402 45 HOH HOH . G 4 HOH A 3 403 13 HOH HOH . G 4 HOH A 4 404 3 HOH HOH . G 4 HOH A 5 405 8 HOH HOH . G 4 HOH A 6 406 6 HOH HOH . G 4 HOH A 7 407 16 HOH HOH . G 4 HOH A 8 408 4 HOH HOH . G 4 HOH A 9 409 25 HOH HOH . G 4 HOH A 10 410 5 HOH HOH . G 4 HOH A 11 411 15 HOH HOH . G 4 HOH A 12 412 24 HOH HOH . G 4 HOH A 13 413 18 HOH HOH . G 4 HOH A 14 414 4 HOH HOH . G 4 HOH A 15 415 19 HOH HOH . G 4 HOH A 16 416 6 HOH HOH . G 4 HOH A 17 417 2 HOH HOH . G 4 HOH A 18 418 54 HOH HOH . G 4 HOH A 19 419 48 HOH HOH . G 4 HOH A 20 420 36 HOH HOH . G 4 HOH A 21 421 13 HOH HOH . G 4 HOH A 22 422 20 HOH HOH . G 4 HOH A 23 423 1 HOH HOH . G 4 HOH A 24 424 22 HOH HOH . G 4 HOH A 25 425 23 HOH HOH . G 4 HOH A 26 426 46 HOH HOH . G 4 HOH A 27 427 19 HOH HOH . G 4 HOH A 28 428 4 HOH HOH . G 4 HOH A 29 429 42 HOH HOH . G 4 HOH A 30 430 44 HOH HOH . G 4 HOH A 31 431 15 HOH HOH . G 4 HOH A 32 432 1 HOH HOH . G 4 HOH A 33 433 16 HOH HOH . G 4 HOH A 34 434 14 HOH HOH . G 4 HOH A 35 435 9 HOH HOH . G 4 HOH A 36 436 30 HOH HOH . G 4 HOH A 37 437 10 HOH HOH . G 4 HOH A 38 438 12 HOH HOH . G 4 HOH A 39 439 7 HOH HOH . G 4 HOH A 40 440 18 HOH HOH . G 4 HOH A 41 441 23 HOH HOH . G 4 HOH A 42 442 3 HOH HOH . G 4 HOH A 43 443 8 HOH HOH . G 4 HOH A 44 444 11 HOH HOH . G 4 HOH A 45 445 35 HOH HOH . G 4 HOH A 46 446 26 HOH HOH . G 4 HOH A 47 447 22 HOH HOH . G 4 HOH A 48 448 14 HOH HOH . G 4 HOH A 49 449 29 HOH HOH . G 4 HOH A 50 450 13 HOH HOH . G 4 HOH A 51 451 49 HOH HOH . G 4 HOH A 52 452 3 HOH HOH . G 4 HOH A 53 453 33 HOH HOH . G 4 HOH A 54 454 34 HOH HOH . G 4 HOH A 55 455 2 HOH HOH . G 4 HOH A 56 456 51 HOH HOH . G 4 HOH A 57 457 12 HOH HOH . G 4 HOH A 58 458 11 HOH HOH . G 4 HOH A 59 459 8 HOH HOH . G 4 HOH A 60 460 37 HOH HOH . G 4 HOH A 61 461 41 HOH HOH . G 4 HOH A 62 462 17 HOH HOH . G 4 HOH A 63 463 52 HOH HOH . G 4 HOH A 64 464 5 HOH HOH . G 4 HOH A 65 465 20 HOH HOH . G 4 HOH A 66 466 24 HOH HOH . G 4 HOH A 67 467 9 HOH HOH . G 4 HOH A 68 468 56 HOH HOH . G 4 HOH A 69 469 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 ID1 . . . B 2 -0.324 29.852 -13.098 0.7 48.46 ? C7 ID1 301 A 1 HETATM 2 C C2 ID1 . . . B 2 0.437 33.563 -10.417 0.7 63.89 ? C2 ID1 301 A 1 HETATM 3 C C6 ID1 . . . B 2 0.61 31.037 -13.055 0.7 49.41 ? C6 ID1 301 A 1 HETATM 4 C C5 ID1 . . . B 2 0.798 31.549 -11.633 0.7 49.83 ? C5 ID1 301 A 1 HETATM 5 C C3 ID1 . . . B 2 -0.818 32.689 -10.518 0.7 57 ? C3 ID1 301 A 1 HETATM 6 O O7 ID1 . . . B 2 -1.388 29.94 -13.637 0.7 43.86 ? O7 ID1 301 A 1 HETATM 7 C C61 ID1 . . . B 2 1.806 30.972 -14.01 0.7 48.9 ? C61 ID1 301 A 1 HETATM 8 O O62 ID1 . . . B 2 2.503 32.225 -14.053 0.7 47.04 ? O62 ID1 301 A 1 HETATM 9 C C62 ID1 . . . B 2 1.349 30.669 -15.41 0.7 50.62 ? C62 ID1 301 A 1 HETATM 10 N N4 ID1 . . . B 2 -0.59 31.597 -11.154 0.7 51.98 ? N4 ID1 301 A 1 HETATM 11 C C31 ID1 . . . B 2 -2.045 32.771 -10.042 0.7 59.91 ? C31 ID1 301 A 1 HETATM 12 O O31 ID1 . . . B 2 -2.743 31.771 -10.305 0.7 44.68 ? O31 ID1 301 A 1 HETATM 13 O O32 ID1 . . . B 2 -2.464 33.739 -9.364 0.7 54.25 ? O32 ID1 301 A 1 HETATM 14 S S21 ID1 . . . B 2 0.295 35.427 -10.549 0.7 79.21 ? S21 ID1 301 A 1 HETATM 15 C C22 ID1 . . . B 2 0.591 36.16 -8.89 0.7 78.83 ? C22 ID1 301 A 1 HETATM 16 C C23 ID1 . . . B 2 1.268 35.186 -7.967 0.7 75.73 ? C23 ID1 301 A 1 HETATM 17 N N24 ID1 . . . B 2 0.758 35.261 -6.58 0.7 75.67 ? N24 ID1 301 A 1 HETATM 18 C C25 ID1 . . . B 2 0.48 34.174 -5.948 0.7 67.05 ? C25 ID1 301 A 1 HETATM 19 N N26 ID1 . . . B 2 0.391 34.103 -4.599 0.7 60.61 ? N26 ID1 301 A 1 HETATM 20 C C1 ID1 . . . B 2 1.356 32.954 -11.47 0.7 53 ? C1 ID1 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #