data_7RP9 # _model_server_result.job_id f3-ZR110wmac9Nrx2CFuXw _model_server_result.datetime_utc '2024-11-13 03:34:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rp9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7RP9 # _exptl.entry_id 7RP9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.362 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Imipenem _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RP9 _cell.length_a 102.304 _cell.length_b 102.304 _cell.length_c 86.921 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RP9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 51 A SER 81 1_555 B C7 ID1 . A ID1 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.367 ? covale ? covale2 A OG SER 51 A SER 81 1_555 C C7 HIW . A HIW 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.357 ? # _chem_comp.formula 'C12 H19 N3 O4 S' _chem_comp.formula_weight 301.362 _chem_comp.id ID1 _chem_comp.mon_nstd_flag . _chem_comp.name Imipenem _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O31 C31 ID1 doub 183 n n C31 O32 ID1 sing 184 n n C31 C3 ID1 sing 185 n n C7 C6 ID1 sing 186 n n C7 O7 ID1 doub 187 n n C3 N4 ID1 doub 188 n n C3 C2 ID1 sing 189 n n N4 C5 ID1 sing 190 n n S21 C2 ID1 sing 191 n n S21 C22 ID1 sing 192 n n C6 C5 ID1 sing 193 n n C6 C61 ID1 sing 194 n n C62 C61 ID1 sing 195 n n C2 C1 ID1 sing 196 n n C5 C1 ID1 sing 197 n n C61 O62 ID1 sing 198 n n C22 C23 ID1 sing 199 n n N24 C23 ID1 sing 200 n n N24 C25 ID1 doub 201 n n C25 N26 ID1 sing 202 n n C7 H1 ID1 sing 203 n n C2 H2 ID1 sing 204 n n C6 H3 ID1 sing 205 n n C5 H4 ID1 sing 206 n n C61 H6 ID1 sing 207 n n O62 H7 ID1 sing 208 n n C62 H8 ID1 sing 209 n n C62 H9 ID1 sing 210 n n C62 H10 ID1 sing 211 n n O32 H13 ID1 sing 212 n n C22 H14 ID1 sing 213 n n C22 H15 ID1 sing 214 n n C23 H16 ID1 sing 215 n n C23 H17 ID1 sing 216 n n C25 H18 ID1 sing 217 n n N26 H19 ID1 sing 218 n n N26 H20 ID1 sing 219 n n C1 H21 ID1 sing 220 n n C1 H22 ID1 sing 221 n n # _atom_sites.entry_id 7RP9 _atom_sites.fract_transf_matrix[1][1] 0.009775 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011505 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ID1 A 1 301 301 ID1 ID1 . C 3 HIW A 1 302 302 HIW HIW . D 4 SO4 A 1 303 1 SO4 SO4 . E 5 BCT A 1 304 1 BCT BCT . F 6 HOH A 1 401 82 HOH HOH . F 6 HOH A 2 402 83 HOH HOH . F 6 HOH A 3 403 88 HOH HOH . F 6 HOH A 4 404 52 HOH HOH . F 6 HOH A 5 405 94 HOH HOH . F 6 HOH A 6 406 66 HOH HOH . F 6 HOH A 7 407 18 HOH HOH . F 6 HOH A 8 408 44 HOH HOH . F 6 HOH A 9 409 91 HOH HOH . F 6 HOH A 10 410 90 HOH HOH . F 6 HOH A 11 411 86 HOH HOH . F 6 HOH A 12 412 84 HOH HOH . F 6 HOH A 13 413 21 HOH HOH . F 6 HOH A 14 414 75 HOH HOH . F 6 HOH A 15 415 60 HOH HOH . F 6 HOH A 16 416 87 HOH HOH . F 6 HOH A 17 417 64 HOH HOH . F 6 HOH A 18 418 57 HOH HOH . F 6 HOH A 19 419 30 HOH HOH . F 6 HOH A 20 420 61 HOH HOH . F 6 HOH A 21 421 6 HOH HOH . F 6 HOH A 22 422 12 HOH HOH . F 6 HOH A 23 423 35 HOH HOH . F 6 HOH A 24 424 10 HOH HOH . F 6 HOH A 25 425 7 HOH HOH . F 6 HOH A 26 426 36 HOH HOH . F 6 HOH A 27 427 45 HOH HOH . F 6 HOH A 28 428 24 HOH HOH . F 6 HOH A 29 429 46 HOH HOH . F 6 HOH A 30 430 11 HOH HOH . F 6 HOH A 31 431 71 HOH HOH . F 6 HOH A 32 432 28 HOH HOH . F 6 HOH A 33 433 25 HOH HOH . F 6 HOH A 34 434 27 HOH HOH . F 6 HOH A 35 435 22 HOH HOH . F 6 HOH A 36 436 20 HOH HOH . F 6 HOH A 37 437 32 HOH HOH . F 6 HOH A 38 438 47 HOH HOH . F 6 HOH A 39 439 2 HOH HOH . F 6 HOH A 40 440 62 HOH HOH . F 6 HOH A 41 441 40 HOH HOH . F 6 HOH A 42 442 48 HOH HOH . F 6 HOH A 43 443 15 HOH HOH . F 6 HOH A 44 444 81 HOH HOH . F 6 HOH A 45 445 53 HOH HOH . F 6 HOH A 46 446 59 HOH HOH . F 6 HOH A 47 447 16 HOH HOH . F 6 HOH A 48 448 78 HOH HOH . F 6 HOH A 49 449 51 HOH HOH . F 6 HOH A 50 450 67 HOH HOH . F 6 HOH A 51 451 5 HOH HOH . F 6 HOH A 52 452 13 HOH HOH . F 6 HOH A 53 453 76 HOH HOH . F 6 HOH A 54 454 63 HOH HOH . F 6 HOH A 55 455 74 HOH HOH . F 6 HOH A 56 456 4 HOH HOH . F 6 HOH A 57 457 39 HOH HOH . F 6 HOH A 58 458 37 HOH HOH . F 6 HOH A 59 459 8 HOH HOH . F 6 HOH A 60 460 23 HOH HOH . F 6 HOH A 61 461 69 HOH HOH . F 6 HOH A 62 462 9 HOH HOH . F 6 HOH A 63 463 68 HOH HOH . F 6 HOH A 64 464 70 HOH HOH . F 6 HOH A 65 465 43 HOH HOH . F 6 HOH A 66 466 26 HOH HOH . F 6 HOH A 67 467 19 HOH HOH . F 6 HOH A 68 468 34 HOH HOH . F 6 HOH A 69 469 29 HOH HOH . F 6 HOH A 70 470 73 HOH HOH . F 6 HOH A 71 471 33 HOH HOH . F 6 HOH A 72 472 92 HOH HOH . F 6 HOH A 73 473 85 HOH HOH . F 6 HOH A 74 474 14 HOH HOH . F 6 HOH A 75 475 3 HOH HOH . F 6 HOH A 76 476 93 HOH HOH . F 6 HOH A 77 477 72 HOH HOH . F 6 HOH A 78 478 41 HOH HOH . F 6 HOH A 79 479 50 HOH HOH . F 6 HOH A 80 480 55 HOH HOH . F 6 HOH A 81 481 54 HOH HOH . F 6 HOH A 82 482 42 HOH HOH . F 6 HOH A 83 483 49 HOH HOH . F 6 HOH A 84 484 58 HOH HOH . F 6 HOH A 85 485 89 HOH HOH . F 6 HOH A 86 486 1 HOH HOH . F 6 HOH A 87 487 56 HOH HOH . F 6 HOH A 88 488 38 HOH HOH . F 6 HOH A 89 489 77 HOH HOH . F 6 HOH A 90 490 80 HOH HOH . F 6 HOH A 91 491 95 HOH HOH . F 6 HOH A 92 492 79 HOH HOH . F 6 HOH A 93 493 65 HOH HOH . F 6 HOH A 94 494 31 HOH HOH . F 6 HOH A 95 495 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 ID1 . A . B 2 -0.214 29.786 -13.274 0.3 50.06 ? C7 ID1 301 A 1 HETATM 2 C C2 ID1 . A . B 2 0.339 33.791 -11.073 0.3 55.6 ? C2 ID1 301 A 1 HETATM 3 C C6 ID1 . A . B 2 0.815 30.879 -13.336 0.3 54.51 ? C6 ID1 301 A 1 HETATM 4 C C5 ID1 . A . B 2 0.911 31.702 -12.056 0.3 57.14 ? C5 ID1 301 A 1 HETATM 5 C C3 ID1 . A . B 2 -0.694 32.696 -10.794 0.3 63.51 ? C3 ID1 301 A 1 HETATM 6 O O7 ID1 . A . B 2 -1.244 29.906 -13.906 0.3 51.04 ? O7 ID1 301 A 1 HETATM 7 C C61 ID1 . A . B 2 2.196 30.362 -13.748 0.3 57.53 ? C61 ID1 301 A 1 HETATM 8 O O62 ID1 . A . B 2 3.082 31.492 -13.729 0.3 62.8 ? O62 ID1 301 A 1 HETATM 9 C C62 ID1 . A . B 2 2.198 29.697 -15.117 0.3 54.48 ? C62 ID1 301 A 1 HETATM 10 N N4 ID1 . A . B 2 -0.406 31.584 -11.383 0.3 62.18 ? N4 ID1 301 A 1 HETATM 11 C C31 ID1 . A . B 2 -1.805 32.719 -10.072 0.3 71.81 ? C31 ID1 301 A 1 HETATM 12 O O31 ID1 . A . B 2 -2.5 31.693 -10.106 0.3 68.1 ? O31 ID1 301 A 1 HETATM 13 O O32 ID1 . A . B 2 -2.127 33.713 -9.42 0.3 68.71 ? O32 ID1 301 A 1 HETATM 14 S S21 ID1 . A . B 2 -0.434 35.423 -11.399 0.3 47.15 ? S21 ID1 301 A 1 HETATM 15 C C22 ID1 . A . B 2 0.862 36.705 -11.4 0.3 42.47 ? C22 ID1 301 A 1 HETATM 16 C C23 ID1 . A . B 2 0.272 38.023 -10.973 0.3 35.81 ? C23 ID1 301 A 1 HETATM 17 C C1 ID1 . A . B 2 1.155 33.207 -12.23 0.3 55.06 ? C1 ID1 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #