data_7RPD # _model_server_result.job_id Ghrksa22sVioajo7k4q-wA _model_server_result.datetime_utc '2024-11-24 07:39:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rpd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 7RPD # _exptl.entry_id 7RPD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 61.017 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BICARBONATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RPD _cell.length_a 102.696 _cell.length_b 102.696 _cell.length_c 85.803 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RPD _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 51 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 81 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CAA _struct_conn.ptnr2_label_comp_id 1RG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 1RG _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.466 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C H O3 -1' _chem_comp.formula_weight 61.017 _chem_comp.id BCT _chem_comp.mon_nstd_flag . _chem_comp.name 'BICARBONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 BCT doub 132 n n C O2 BCT sing 133 n n C O3 BCT sing 134 n n O3 HO3 BCT sing 135 n n # _atom_sites.entry_id 7RPD _atom_sites.fract_transf_matrix[1][1] 0.009737 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009737 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1RG A 1 301 1 1RG 1RG . C 3 BCT A 1 302 1 BCT BCT . D 3 BCT A 1 303 2 BCT BCT . E 4 SO4 A 1 304 1 SO4 SO4 . F 5 HOH A 1 401 90 HOH HOH . F 5 HOH A 2 402 54 HOH HOH . F 5 HOH A 3 403 27 HOH HOH . F 5 HOH A 4 404 67 HOH HOH . F 5 HOH A 5 405 31 HOH HOH . F 5 HOH A 6 406 89 HOH HOH . F 5 HOH A 7 407 97 HOH HOH . F 5 HOH A 8 408 80 HOH HOH . F 5 HOH A 9 409 82 HOH HOH . F 5 HOH A 10 410 49 HOH HOH . F 5 HOH A 11 411 76 HOH HOH . F 5 HOH A 12 412 21 HOH HOH . F 5 HOH A 13 413 28 HOH HOH . F 5 HOH A 14 414 56 HOH HOH . F 5 HOH A 15 415 84 HOH HOH . F 5 HOH A 16 416 46 HOH HOH . F 5 HOH A 17 417 95 HOH HOH . F 5 HOH A 18 418 99 HOH HOH . F 5 HOH A 19 419 92 HOH HOH . F 5 HOH A 20 420 14 HOH HOH . F 5 HOH A 21 421 71 HOH HOH . F 5 HOH A 22 422 81 HOH HOH . F 5 HOH A 23 423 62 HOH HOH . F 5 HOH A 24 424 50 HOH HOH . F 5 HOH A 25 425 33 HOH HOH . F 5 HOH A 26 426 34 HOH HOH . F 5 HOH A 27 427 75 HOH HOH . F 5 HOH A 28 428 38 HOH HOH . F 5 HOH A 29 429 88 HOH HOH . F 5 HOH A 30 430 15 HOH HOH . F 5 HOH A 31 431 73 HOH HOH . F 5 HOH A 32 432 36 HOH HOH . F 5 HOH A 33 433 10 HOH HOH . F 5 HOH A 34 434 23 HOH HOH . F 5 HOH A 35 435 35 HOH HOH . F 5 HOH A 36 436 60 HOH HOH . F 5 HOH A 37 437 91 HOH HOH . F 5 HOH A 38 438 43 HOH HOH . F 5 HOH A 39 439 98 HOH HOH . F 5 HOH A 40 440 61 HOH HOH . F 5 HOH A 41 441 55 HOH HOH . F 5 HOH A 42 442 48 HOH HOH . F 5 HOH A 43 443 68 HOH HOH . F 5 HOH A 44 444 22 HOH HOH . F 5 HOH A 45 445 4 HOH HOH . F 5 HOH A 46 446 86 HOH HOH . F 5 HOH A 47 447 83 HOH HOH . F 5 HOH A 48 448 16 HOH HOH . F 5 HOH A 49 449 78 HOH HOH . F 5 HOH A 50 450 53 HOH HOH . F 5 HOH A 51 451 37 HOH HOH . F 5 HOH A 52 452 41 HOH HOH . F 5 HOH A 53 453 101 HOH HOH . F 5 HOH A 54 454 13 HOH HOH . F 5 HOH A 55 455 2 HOH HOH . F 5 HOH A 56 456 51 HOH HOH . F 5 HOH A 57 457 1 HOH HOH . F 5 HOH A 58 458 24 HOH HOH . F 5 HOH A 59 459 32 HOH HOH . F 5 HOH A 60 460 11 HOH HOH . F 5 HOH A 61 461 57 HOH HOH . F 5 HOH A 62 462 79 HOH HOH . F 5 HOH A 63 463 19 HOH HOH . F 5 HOH A 64 464 17 HOH HOH . F 5 HOH A 65 465 26 HOH HOH . F 5 HOH A 66 466 94 HOH HOH . F 5 HOH A 67 467 58 HOH HOH . F 5 HOH A 68 468 25 HOH HOH . F 5 HOH A 69 469 12 HOH HOH . F 5 HOH A 70 470 8 HOH HOH . F 5 HOH A 71 471 72 HOH HOH . F 5 HOH A 72 472 30 HOH HOH . F 5 HOH A 73 473 6 HOH HOH . F 5 HOH A 74 474 96 HOH HOH . F 5 HOH A 75 475 100 HOH HOH . F 5 HOH A 76 476 69 HOH HOH . F 5 HOH A 77 477 5 HOH HOH . F 5 HOH A 78 478 40 HOH HOH . F 5 HOH A 79 479 64 HOH HOH . F 5 HOH A 80 480 18 HOH HOH . F 5 HOH A 81 481 85 HOH HOH . F 5 HOH A 82 482 102 HOH HOH . F 5 HOH A 83 483 39 HOH HOH . F 5 HOH A 84 484 87 HOH HOH . F 5 HOH A 85 485 42 HOH HOH . F 5 HOH A 86 486 9 HOH HOH . F 5 HOH A 87 487 70 HOH HOH . F 5 HOH A 88 488 59 HOH HOH . F 5 HOH A 89 489 3 HOH HOH . F 5 HOH A 90 490 44 HOH HOH . F 5 HOH A 91 491 63 HOH HOH . F 5 HOH A 92 492 7 HOH HOH . F 5 HOH A 93 493 29 HOH HOH . F 5 HOH A 94 494 47 HOH HOH . F 5 HOH A 95 495 74 HOH HOH . F 5 HOH A 96 496 77 HOH HOH . F 5 HOH A 97 497 65 HOH HOH . F 5 HOH A 98 498 66 HOH HOH . F 5 HOH A 99 499 45 HOH HOH . F 5 HOH A 100 500 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C BCT . . . C 3 -5.611 3.187 -2.32 1 76.55 ? C BCT 302 A 1 HETATM 2 O O1 BCT . . . C 3 -5.224 2.538 -3.277 1 75.16 ? O1 BCT 302 A 1 HETATM 3 O O2 BCT . . . C 3 -6.77 3.457 -2.089 1 78.89 ? O2 BCT 302 A 1 HETATM 4 O O3 BCT . . . C 3 -4.706 3.631 -1.473 1 76.09 ? O3 BCT 302 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #