data_7RPJ
#
_model_server_result.job_id            '_DEW6XFwIdBDzIzgIqtvHw' 
_model_server_result.datetime_utc      '2024-10-31 07:24:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rpj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1611}' 
#
_entry.id    7RPJ 
#
_exptl.entry_id    7RPJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 123 A CYS 292 1_555 A SG CYS 179 A CYS 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 153 A CYS 322 1_555 A SG CYS 197 A CYS 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 A SG CYS 170 A CYS 339 1_555 A SG CYS 178 A CYS 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 A SG CYS 215 A CYS 384 1_555 A SG CYS 248 A CYS 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf5 A SG CYS 228 A CYS 397 1_555 A SG CYS 241 A CYS 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 A SG CYS 660 A CYS 829 1_555 A SG CYS 680 A CYS 849 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf7 A SG CYS 694 A CYS 863 1_555 A SG CYS 703 A CYS 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf8 A SG CYS 702 A CYS 871 1_555 A SG CYS 718 A CYS 887 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf9 A SG CYS 958 A CYS 1127 1_555 A SG CYS 962 A CYS 1131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
covale ? covale1 A ND2 ASN 193 A ASN 362 1_555 F C1 NAG . A NAG 1605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale2 A ND2 ASN 306 A ASN 475 1_555 B C1 NAG . A NAG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale3 A ND2 ASN 665 A ASN 834 1_555 C C1 NAG . A NAG 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale4 A ND2 ASN 746 A ASN 915 1_555 D C1 NAG . A NAG 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7RPJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 1601 1202 NAG NAG . 
C 2 NAG A 1 1602 1203 NAG NAG . 
D 2 NAG A 1 1603 1201 NAG NAG . 
E 2 NAG A 1 1604 1205 NAG NAG . 
F 2 NAG A 1 1605 1204 NAG NAG . 
G 3 Y01 A 1 1606 2101 Y01 Y01 . 
H 3 Y01 A 1 1607 2601 Y01 Y01 . 
I 3 Y01 A 1 1608 1201 Y01 Y01 . 
J 3 Y01 A 1 1609 1601 Y01 Y01 . 
K 3 Y01 A 1 1610 2701 Y01 Y01 . 
L 3 Y01 A 1 1611 2301 Y01 Y01 . 
M 3 Y01 A 1 1612 1401 Y01 Y01 . 
N 3 Y01 A 1 1613 2501 Y01 Y01 . 
O 3 Y01 A 1 1614 2001 Y01 Y01 . 
P 3 Y01 A 1 1615 1701 Y01 Y01 . 
Q 3 Y01 A 1 1616 1901 Y01 Y01 . 
R 3 Y01 A 1 1617 1301 Y01 Y01 . 
S 3 Y01 A 1 1618 1801 Y01 Y01 . 
T 3 Y01 A 1 1619 1501 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . L 3 137.072 138.06 138.368 1 86.68 ? CAA Y01 1611 A 1 
HETATM 2 C CBA Y01 . . . L 3 137.343 136.575 138.714 1 86.68 ? CBA Y01 1611 A 1 
HETATM 3 C CAB Y01 . . . L 3 136.534 135.666 137.76 1 86.68 ? CAB Y01 1611 A 1 
HETATM 4 C CAN Y01 . . . L 3 137.008 136.233 140.193 1 86.68 ? CAN Y01 1611 A 1 
HETATM 5 C CAJ Y01 . . . L 3 137.877 136.981 141.229 1 86.68 ? CAJ Y01 1611 A 1 
HETATM 6 C CAO Y01 . . . L 3 137.47 136.632 142.687 1 86.68 ? CAO Y01 1611 A 1 
HETATM 7 C CBB Y01 . . . L 3 137.544 137.855 143.656 1 86.68 ? CBB Y01 1611 A 1 
HETATM 8 C CAC Y01 . . . L 3 136.378 138.84 143.335 1 86.68 ? CAC Y01 1611 A 1 
HETATM 9 C CBE Y01 . . . L 3 137.527 137.402 145.166 1 86.68 ? CBE Y01 1611 A 1 
HETATM 10 C CAP Y01 . . . L 3 138.692 136.427 145.53 1 86.68 ? CAP Y01 1611 A 1 
HETATM 11 C CAQ Y01 . . . L 3 139.055 136.675 147.013 1 86.68 ? CAQ Y01 1611 A 1 
HETATM 12 C CBG Y01 . . . L 3 138.001 137.674 147.508 1 86.68 ? CBG Y01 1611 A 1 
HETATM 13 C CBI Y01 . . . L 3 137.616 138.516 146.267 1 86.68 ? CBI Y01 1611 A 1 
HETATM 14 C CAE Y01 . . . L 3 138.716 139.57 145.88 1 86.68 ? CAE Y01 1611 A 1 
HETATM 15 C CAU Y01 . . . L 3 136.279 139.226 146.638 1 86.68 ? CAU Y01 1611 A 1 
HETATM 16 C CAS Y01 . . . L 3 136.431 140.137 147.891 1 86.68 ? CAS Y01 1611 A 1 
HETATM 17 C CBF Y01 . . . L 3 137.136 139.461 149.134 1 86.68 ? CBF Y01 1611 A 1 
HETATM 18 C CBD Y01 . . . L 3 138.342 138.54 148.749 1 86.68 ? CBD Y01 1611 A 1 
HETATM 19 C CAK Y01 . . . L 3 138.724 137.682 149.972 1 86.68 ? CAK Y01 1611 A 1 
HETATM 20 C CAI Y01 . . . L 3 138.944 138.557 151.184 1 86.68 ? CAI Y01 1611 A 1 
HETATM 21 C CAZ Y01 . . . L 3 138.478 139.809 151.307 1 86.68 ? CAZ Y01 1611 A 1 
HETATM 22 C CAV Y01 . . . L 3 138.85 140.667 152.514 1 86.68 ? CAV Y01 1611 A 1 
HETATM 23 C CBH Y01 . . . L 3 137.544 140.478 150.282 1 86.68 ? CBH Y01 1611 A 1 
HETATM 24 C CAD Y01 . . . L 3 138.259 141.736 149.676 1 86.68 ? CAD Y01 1611 A 1 
HETATM 25 C CAT Y01 . . . L 3 136.261 140.903 151.06 1 86.68 ? CAT Y01 1611 A 1 
HETATM 26 C CAR Y01 . . . L 3 136.553 141.872 152.232 1 86.68 ? CAR Y01 1611 A 1 
HETATM 27 C CBC Y01 . . . L 3 137.646 141.36 153.206 1 86.68 ? CBC Y01 1611 A 1 
HETATM 28 O OAW Y01 . . . L 3 138.157 142.531 153.899 1 86.68 ? OAW Y01 1611 A 1 
HETATM 29 C CAY Y01 . . . L 3 137.773 142.886 155.163 1 86.68 ? CAY Y01 1611 A 1 
HETATM 30 O OAG Y01 . . . L 3 137.731 144.056 155.504 1 86.68 ? OAG Y01 1611 A 1 
HETATM 31 C CAM Y01 . . . L 3 137.807 141.742 156.19 1 86.68 ? CAM Y01 1611 A 1 
HETATM 32 C CAL Y01 . . . L 3 139.222 141.109 156.332 1 86.68 ? CAL Y01 1611 A 1 
HETATM 33 C CAX Y01 . . . L 3 139.229 139.884 157.231 1 86.68 ? CAX Y01 1611 A 1 
HETATM 34 O OAH Y01 . . . L 3 139.092 140.053 158.425 1 86.68 ? OAH Y01 1611 A 1 
HETATM 35 O OAF Y01 . . . L 3 139.425 138.799 156.721 1 86.68 ? OAF Y01 1611 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           35 
#