data_7RQQ # _model_server_result.job_id E1D1fpeoC838IJ4tQI9NwQ _model_server_result.datetime_utc '2024-10-19 10:19:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rqq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":303}' # _entry.id 7RQQ # _exptl.entry_id 7RQQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.24 _cell.angle_gamma 90 _cell.entry_id 7RQQ _cell.length_a 42.787 _cell.length_b 84.944 _cell.length_c 64.243 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RQQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? disulf ? disulf2 A SG CYS 147 H CYS 147 1_555 A SG CYS 203 H CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? disulf ? disulf4 B SG CYS 134 L CYS 134 1_555 B SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? covale ? covale1 A C PCA 1 H PCA 1 1_555 A N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7RQQ _atom_sites.fract_transf_matrix[1][1] 0.023372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005498 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011772 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 H 1 301 301 SO4 SO4 . E 5 EDO H 1 302 302 EDO EDO . F 5 EDO H 1 303 303 EDO EDO . G 5 EDO L 1 301 301 EDO EDO . H 6 HOH H 1 401 27 HOH HOH . H 6 HOH H 2 402 196 HOH HOH . H 6 HOH H 3 403 175 HOH HOH . H 6 HOH H 4 404 212 HOH HOH . H 6 HOH H 5 405 158 HOH HOH . H 6 HOH H 6 406 15 HOH HOH . H 6 HOH H 7 407 129 HOH HOH . H 6 HOH H 8 408 68 HOH HOH . H 6 HOH H 9 409 189 HOH HOH . H 6 HOH H 10 410 122 HOH HOH . H 6 HOH H 11 411 155 HOH HOH . H 6 HOH H 12 412 181 HOH HOH . H 6 HOH H 13 413 105 HOH HOH . H 6 HOH H 14 414 146 HOH HOH . H 6 HOH H 15 415 56 HOH HOH . H 6 HOH H 16 416 78 HOH HOH . H 6 HOH H 17 417 9 HOH HOH . H 6 HOH H 18 418 169 HOH HOH . H 6 HOH H 19 419 50 HOH HOH . H 6 HOH H 20 420 109 HOH HOH . H 6 HOH H 21 421 10 HOH HOH . H 6 HOH H 22 422 63 HOH HOH . H 6 HOH H 23 423 3 HOH HOH . H 6 HOH H 24 424 31 HOH HOH . H 6 HOH H 25 425 11 HOH HOH . H 6 HOH H 26 426 100 HOH HOH . H 6 HOH H 27 427 136 HOH HOH . H 6 HOH H 28 428 115 HOH HOH . H 6 HOH H 29 429 82 HOH HOH . H 6 HOH H 30 430 104 HOH HOH . H 6 HOH H 31 431 160 HOH HOH . H 6 HOH H 32 432 103 HOH HOH . H 6 HOH H 33 433 12 HOH HOH . H 6 HOH H 34 434 18 HOH HOH . H 6 HOH H 35 435 184 HOH HOH . H 6 HOH H 36 436 22 HOH HOH . H 6 HOH H 37 437 52 HOH HOH . H 6 HOH H 38 438 1 HOH HOH . H 6 HOH H 39 439 5 HOH HOH . H 6 HOH H 40 440 215 HOH HOH . H 6 HOH H 41 441 77 HOH HOH . H 6 HOH H 42 442 66 HOH HOH . H 6 HOH H 43 443 131 HOH HOH . H 6 HOH H 44 444 192 HOH HOH . H 6 HOH H 45 445 177 HOH HOH . H 6 HOH H 46 446 20 HOH HOH . H 6 HOH H 47 447 92 HOH HOH . H 6 HOH H 48 448 118 HOH HOH . H 6 HOH H 49 449 164 HOH HOH . H 6 HOH H 50 450 72 HOH HOH . H 6 HOH H 51 451 98 HOH HOH . H 6 HOH H 52 452 34 HOH HOH . H 6 HOH H 53 453 123 HOH HOH . H 6 HOH H 54 454 139 HOH HOH . H 6 HOH H 55 455 159 HOH HOH . H 6 HOH H 56 456 51 HOH HOH . H 6 HOH H 57 457 58 HOH HOH . H 6 HOH H 58 458 74 HOH HOH . H 6 HOH H 59 459 209 HOH HOH . H 6 HOH H 60 460 76 HOH HOH . H 6 HOH H 61 461 117 HOH HOH . H 6 HOH H 62 462 32 HOH HOH . H 6 HOH H 63 463 106 HOH HOH . H 6 HOH H 64 464 135 HOH HOH . H 6 HOH H 65 465 174 HOH HOH . H 6 HOH H 66 466 173 HOH HOH . H 6 HOH H 67 467 59 HOH HOH . H 6 HOH H 68 468 24 HOH HOH . H 6 HOH H 69 469 36 HOH HOH . H 6 HOH H 70 470 45 HOH HOH . H 6 HOH H 71 471 70 HOH HOH . H 6 HOH H 72 472 90 HOH HOH . H 6 HOH H 73 473 94 HOH HOH . H 6 HOH H 74 474 114 HOH HOH . H 6 HOH H 75 475 69 HOH HOH . H 6 HOH H 76 476 143 HOH HOH . H 6 HOH H 77 477 17 HOH HOH . H 6 HOH H 78 478 101 HOH HOH . H 6 HOH H 79 479 202 HOH HOH . H 6 HOH H 80 480 147 HOH HOH . H 6 HOH H 81 481 206 HOH HOH . H 6 HOH H 82 482 107 HOH HOH . H 6 HOH H 83 483 53 HOH HOH . H 6 HOH H 84 484 14 HOH HOH . H 6 HOH H 85 485 102 HOH HOH . H 6 HOH H 86 486 127 HOH HOH . H 6 HOH H 87 487 48 HOH HOH . H 6 HOH H 88 488 79 HOH HOH . H 6 HOH H 89 489 133 HOH HOH . H 6 HOH H 90 490 21 HOH HOH . H 6 HOH H 91 491 80 HOH HOH . H 6 HOH H 92 492 57 HOH HOH . H 6 HOH H 93 493 199 HOH HOH . H 6 HOH H 94 494 96 HOH HOH . H 6 HOH H 95 495 178 HOH HOH . H 6 HOH H 96 496 43 HOH HOH . H 6 HOH H 97 497 110 HOH HOH . H 6 HOH H 98 498 162 HOH HOH . H 6 HOH H 99 499 171 HOH HOH . H 6 HOH H 100 500 124 HOH HOH . H 6 HOH H 101 501 108 HOH HOH . H 6 HOH H 102 502 200 HOH HOH . H 6 HOH H 103 503 219 HOH HOH . H 6 HOH H 104 504 97 HOH HOH . H 6 HOH H 105 505 211 HOH HOH . H 6 HOH H 106 506 148 HOH HOH . H 6 HOH H 107 507 216 HOH HOH . H 6 HOH H 108 508 185 HOH HOH . H 6 HOH H 109 509 176 HOH HOH . H 6 HOH H 110 510 188 HOH HOH . H 6 HOH H 111 511 137 HOH HOH . H 6 HOH H 112 512 187 HOH HOH . H 6 HOH H 113 513 152 HOH HOH . H 6 HOH H 114 514 179 HOH HOH . H 6 HOH H 115 515 194 HOH HOH . I 6 HOH L 1 401 213 HOH HOH . I 6 HOH L 2 402 128 HOH HOH . I 6 HOH L 3 403 210 HOH HOH . I 6 HOH L 4 404 29 HOH HOH . I 6 HOH L 5 405 8 HOH HOH . I 6 HOH L 6 406 86 HOH HOH . I 6 HOH L 7 407 28 HOH HOH . I 6 HOH L 8 408 35 HOH HOH . I 6 HOH L 9 409 116 HOH HOH . I 6 HOH L 10 410 145 HOH HOH . I 6 HOH L 11 411 25 HOH HOH . I 6 HOH L 12 412 81 HOH HOH . I 6 HOH L 13 413 134 HOH HOH . I 6 HOH L 14 414 165 HOH HOH . I 6 HOH L 15 415 144 HOH HOH . I 6 HOH L 16 416 23 HOH HOH . I 6 HOH L 17 417 61 HOH HOH . I 6 HOH L 18 418 85 HOH HOH . I 6 HOH L 19 419 73 HOH HOH . I 6 HOH L 20 420 197 HOH HOH . I 6 HOH L 21 421 46 HOH HOH . I 6 HOH L 22 422 7 HOH HOH . I 6 HOH L 23 423 54 HOH HOH . I 6 HOH L 24 424 99 HOH HOH . I 6 HOH L 25 425 83 HOH HOH . I 6 HOH L 26 426 166 HOH HOH . I 6 HOH L 27 427 130 HOH HOH . I 6 HOH L 28 428 2 HOH HOH . I 6 HOH L 29 429 113 HOH HOH . I 6 HOH L 30 430 218 HOH HOH . I 6 HOH L 31 431 13 HOH HOH . I 6 HOH L 32 432 140 HOH HOH . I 6 HOH L 33 433 193 HOH HOH . I 6 HOH L 34 434 214 HOH HOH . I 6 HOH L 35 435 163 HOH HOH . I 6 HOH L 36 436 112 HOH HOH . I 6 HOH L 37 437 41 HOH HOH . I 6 HOH L 38 438 217 HOH HOH . I 6 HOH L 39 439 125 HOH HOH . I 6 HOH L 40 440 42 HOH HOH . I 6 HOH L 41 441 203 HOH HOH . I 6 HOH L 42 442 60 HOH HOH . I 6 HOH L 43 443 195 HOH HOH . I 6 HOH L 44 444 33 HOH HOH . I 6 HOH L 45 445 156 HOH HOH . I 6 HOH L 46 446 191 HOH HOH . I 6 HOH L 47 447 16 HOH HOH . I 6 HOH L 48 448 44 HOH HOH . I 6 HOH L 49 449 88 HOH HOH . I 6 HOH L 50 450 93 HOH HOH . I 6 HOH L 51 451 40 HOH HOH . I 6 HOH L 52 452 65 HOH HOH . I 6 HOH L 53 453 95 HOH HOH . I 6 HOH L 54 454 84 HOH HOH . I 6 HOH L 55 455 4 HOH HOH . I 6 HOH L 56 456 75 HOH HOH . I 6 HOH L 57 457 89 HOH HOH . I 6 HOH L 58 458 186 HOH HOH . I 6 HOH L 59 459 19 HOH HOH . I 6 HOH L 60 460 91 HOH HOH . I 6 HOH L 61 461 62 HOH HOH . I 6 HOH L 62 462 161 HOH HOH . I 6 HOH L 63 463 149 HOH HOH . I 6 HOH L 64 464 153 HOH HOH . I 6 HOH L 65 465 205 HOH HOH . I 6 HOH L 66 466 38 HOH HOH . I 6 HOH L 67 467 87 HOH HOH . I 6 HOH L 68 468 180 HOH HOH . I 6 HOH L 69 469 6 HOH HOH . I 6 HOH L 70 470 190 HOH HOH . I 6 HOH L 71 471 208 HOH HOH . I 6 HOH L 72 472 71 HOH HOH . I 6 HOH L 73 473 47 HOH HOH . I 6 HOH L 74 474 201 HOH HOH . I 6 HOH L 75 475 26 HOH HOH . I 6 HOH L 76 476 150 HOH HOH . I 6 HOH L 77 477 39 HOH HOH . I 6 HOH L 78 478 55 HOH HOH . I 6 HOH L 79 479 198 HOH HOH . I 6 HOH L 80 480 37 HOH HOH . I 6 HOH L 81 481 67 HOH HOH . I 6 HOH L 82 482 167 HOH HOH . I 6 HOH L 83 483 170 HOH HOH . I 6 HOH L 84 484 204 HOH HOH . I 6 HOH L 85 485 132 HOH HOH . I 6 HOH L 86 486 64 HOH HOH . I 6 HOH L 87 487 120 HOH HOH . I 6 HOH L 88 488 126 HOH HOH . I 6 HOH L 89 489 207 HOH HOH . I 6 HOH L 90 490 157 HOH HOH . I 6 HOH L 91 491 119 HOH HOH . I 6 HOH L 92 492 141 HOH HOH . I 6 HOH L 93 493 168 HOH HOH . I 6 HOH L 94 494 183 HOH HOH . I 6 HOH L 95 495 49 HOH HOH . I 6 HOH L 96 496 154 HOH HOH . I 6 HOH L 97 497 142 HOH HOH . I 6 HOH L 98 498 30 HOH HOH . I 6 HOH L 99 499 151 HOH HOH . I 6 HOH L 100 500 121 HOH HOH . J 6 HOH P 1 201 111 HOH HOH . J 6 HOH P 2 202 182 HOH HOH . J 6 HOH P 3 203 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 5 35.701 -14.286 16.63 1 49.84 ? C1 EDO 303 H 1 HETATM 2 O O1 EDO . . . F 5 35.616 -13.515 15.43 1 48.63 ? O1 EDO 303 H 1 HETATM 3 C C2 EDO . . . F 5 34.883 -15.576 16.495 1 60.78 ? C2 EDO 303 H 1 HETATM 4 O O2 EDO . . . F 5 35.758 -16.702 16.291 1 65.95 ? O2 EDO 303 H 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #