data_7RQW
#
_model_server_result.job_id            IyNnJeZHdcvcsfQvhiQiwg 
_model_server_result.datetime_utc      '2024-11-14 10:53:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rqw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":904}' 
#
_entry.id    7RQW 
#
_exptl.entry_id    7RQW 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              717.996 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7RQW 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RQW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 J N N 
? 5 N N N 
? 5 O N N 
? 5 Q N N 
? 5 T N N 
? 5 U N N 
? 5 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 386 A CYS 386 1_555 A SG CYS 390 A CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 B SG CYS 386 B CYS 386 1_555 B SG CYS 390 B CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 C SG CYS 386 C CYS 386 1_555 C SG CYS 390 C CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 386 D CYS 386 1_555 D SG CYS 390 D CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
#
_chem_comp.formula           'C39 H76 N O8 P' 
_chem_comp.formula_weight    717.996 
_chem_comp.id                6OU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C48 C47 6OU sing 93 n n 
C48 C49 6OU sing 94 n n 
C47 C46 6OU sing 95 n n 
C41 C40 6OU doub 96 z n 
C41 C42 6OU sing 97 n n 
C40 C39 6OU sing 98 n n 
C27 C28 6OU sing 99 n n 
C27 O26 6OU sing 100 n n 
C28 N29 6OU sing 101 n n 
C01 C02 6OU sing 102 n n 
C42 C43 6OU sing 103 n n 
C02 C03 6OU sing 104 n n 
C45 C46 6OU sing 105 n n 
C45 C44 6OU sing 106 n n 
C39 C38 6OU sing 107 n n 
C33 C34 6OU sing 108 n n 
C33 C31 6OU sing 109 n n 
C44 C43 6OU sing 110 n n 
O26 P23 6OU sing 111 n n 
O24 P23 6OU doub 112 n n 
C35 C34 6OU sing 113 n n 
C35 C36 6OU sing 114 n n 
C38 C37 6OU sing 115 n n 
C36 C37 6OU sing 116 n n 
C31 O30 6OU sing 117 n n 
C31 O32 6OU doub 118 n n 
O22 P23 6OU sing 119 n n 
O22 C21 6OU sing 120 n n 
O30 C20 6OU sing 121 n n 
P23 O25 6OU sing 122 n n 
C03 C04 6OU sing 123 n n 
C04 C05 6OU sing 124 n n 
C19 C20 6OU sing 125 n n 
C19 O18 6OU sing 126 n n 
C21 C20 6OU sing 127 n n 
C15 C14 6OU sing 128 n n 
C15 C16 6OU sing 129 n n 
O18 C16 6OU sing 130 n n 
C14 C13 6OU sing 131 n n 
C05 C06 6OU sing 132 n n 
C16 O17 6OU doub 133 n n 
C06 C07 6OU sing 134 n n 
C11 C10 6OU sing 135 n n 
C11 C12 6OU sing 136 n n 
C13 C12 6OU sing 137 n n 
C10 C09 6OU sing 138 n n 
C07 C08 6OU sing 139 n n 
C09 C08 6OU sing 140 n n 
C01 H1 6OU sing 141 n n 
C01 H2 6OU sing 142 n n 
C01 H3 6OU sing 143 n n 
C02 H4 6OU sing 144 n n 
C02 H5 6OU sing 145 n n 
C03 H6 6OU sing 146 n n 
C03 H7 6OU sing 147 n n 
C04 H8 6OU sing 148 n n 
C04 H9 6OU sing 149 n n 
C05 H10 6OU sing 150 n n 
C05 H11 6OU sing 151 n n 
C06 H12 6OU sing 152 n n 
C06 H13 6OU sing 153 n n 
C07 H14 6OU sing 154 n n 
C07 H15 6OU sing 155 n n 
C08 H16 6OU sing 156 n n 
C08 H17 6OU sing 157 n n 
C09 H18 6OU sing 158 n n 
C09 H19 6OU sing 159 n n 
C10 H20 6OU sing 160 n n 
C10 H21 6OU sing 161 n n 
C11 H22 6OU sing 162 n n 
C11 H23 6OU sing 163 n n 
C12 H24 6OU sing 164 n n 
C12 H25 6OU sing 165 n n 
C13 H26 6OU sing 166 n n 
C13 H27 6OU sing 167 n n 
C14 H28 6OU sing 168 n n 
C14 H29 6OU sing 169 n n 
C15 H30 6OU sing 170 n n 
C15 H31 6OU sing 171 n n 
C19 H32 6OU sing 172 n n 
C19 H33 6OU sing 173 n n 
C20 H34 6OU sing 174 n n 
C21 H35 6OU sing 175 n n 
C21 H36 6OU sing 176 n n 
O25 H37 6OU sing 177 n n 
C27 H38 6OU sing 178 n n 
C27 H39 6OU sing 179 n n 
C28 H40 6OU sing 180 n n 
C28 H41 6OU sing 181 n n 
N29 H42 6OU sing 182 n n 
N29 H43 6OU sing 183 n n 
C33 H45 6OU sing 184 n n 
C33 H46 6OU sing 185 n n 
C34 H47 6OU sing 186 n n 
C34 H48 6OU sing 187 n n 
C35 H49 6OU sing 188 n n 
C35 H50 6OU sing 189 n n 
C36 H51 6OU sing 190 n n 
C36 H52 6OU sing 191 n n 
C37 H53 6OU sing 192 n n 
C37 H54 6OU sing 193 n n 
C38 H55 6OU sing 194 n n 
C38 H56 6OU sing 195 n n 
C39 H57 6OU sing 196 n n 
C39 H58 6OU sing 197 n n 
C40 H59 6OU sing 198 n n 
C41 H60 6OU sing 199 n n 
C42 H61 6OU sing 200 n n 
C42 H62 6OU sing 201 n n 
C43 H63 6OU sing 202 n n 
C43 H64 6OU sing 203 n n 
C44 H65 6OU sing 204 n n 
C44 H66 6OU sing 205 n n 
C45 H67 6OU sing 206 n n 
C45 H68 6OU sing 207 n n 
C46 H69 6OU sing 208 n n 
C46 H70 6OU sing 209 n n 
C47 H71 6OU sing 210 n n 
C47 H72 6OU sing 211 n n 
C48 H73 6OU sing 212 n n 
C48 H74 6OU sing 213 n n 
C49 H75 6OU sing 214 n n 
C49 H76 6OU sing 215 n n 
C49 H77 6OU sing 216 n n 
#
_atom_sites.entry_id                     7RQW 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 6EU A 1 901 901 6EU 6EU . 
F 3 PCW A 1 902 1001 PCW PCW . 
G 4 LBN A 1 903 1500 LBN PC . 
H 5 6OU A 1 904 1900 6OU PE . 
I 4 LBN A 1 905 1500 LBN PC . 
J 5 6OU A 1 906 1300 6OU PE . 
K 2 6EU B 1 901 901 6EU 6EU . 
L 3 PCW B 1 902 1001 PCW PCW . 
M 4 LBN B 1 903 1500 LBN PC . 
N 5 6OU B 1 904 1900 6OU PE . 
O 5 6OU B 1 905 1300 6OU PE . 
P 4 LBN B 1 906 1500 LBN PC . 
Q 5 6OU C 1 901 1300 6OU PE . 
R 2 6EU C 1 902 901 6EU 6EU . 
S 3 PCW C 1 903 1001 PCW PCW . 
T 5 6OU C 1 904 1900 6OU PE . 
U 5 6OU D 1 901 1300 6OU PE . 
V 2 6EU D 1 902 901 6EU 6EU . 
W 3 PCW D 1 903 1001 PCW PCW . 
X 5 6OU D 1 904 1900 6OU PE . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 6OU . . . N 5 163.874 145.372 127.484 1 13.9 ? C11 6OU 904 B 1 
HETATM 2 C C12 6OU . . . N 5 164.777 145.508 128.751 1 13.9 ? C12 6OU 904 B 1 
HETATM 3 C C13 6OU . . . N 5 164.449 144.594 129.963 1 13.9 ? C13 6OU 904 B 1 
HETATM 4 C C14 6OU . . . N 5 165.324 144.828 131.241 1 13.9 ? C14 6OU 904 B 1 
HETATM 5 C C15 6OU . . . N 5 164.658 144.439 132.594 1 13.9 ? C15 6OU 904 B 1 
HETATM 6 C C16 6OU . . . N 5 165.596 144.591 133.819 1 13.9 ? C16 6OU 904 B 1 
HETATM 7 O O17 6OU . . . N 5 166.787 144.561 133.746 1 13.9 ? O17 6OU 904 B 1 
HETATM 8 O O18 6OU . . . N 5 164.964 144.76 135.035 1 13.9 ? O18 6OU 904 B 1 
HETATM 9 C C19 6OU . . . N 5 165.338 145.923 135.789 1 13.9 ? C19 6OU 904 B 1 
HETATM 10 C C20 6OU . . . N 5 164.198 146.426 136.743 1 13.9 ? C20 6OU 904 B 1 
HETATM 11 C C21 6OU . . . N 5 163.59 145.258 137.616 1 13.9 ? C21 6OU 904 B 1 
HETATM 12 O O30 6OU . . . N 5 163.152 147.028 135.938 1 13.9 ? O30 6OU 904 B 1 
HETATM 13 C C31 6OU . . . N 5 163.369 148.289 135.395 1 13.9 ? C31 6OU 904 B 1 
HETATM 14 O O32 6OU . . . N 5 164.46 148.752 135.335 1 13.9 ? O32 6OU 904 B 1 
HETATM 15 C C33 6OU . . . N 5 162.11 149.06 134.889 1 13.9 ? C33 6OU 904 B 1 
HETATM 16 C C34 6OU . . . N 5 162.079 149.275 133.333 1 13.9 ? C34 6OU 904 B 1 
HETATM 17 C C35 6OU . . . N 5 162.466 148.057 132.443 1 13.9 ? C35 6OU 904 B 1 
HETATM 18 C C36 6OU . . . N 5 161.744 147.961 131.063 1 13.9 ? C36 6OU 904 B 1 
HETATM 19 C C37 6OU . . . N 5 161.824 149.18 130.12 1 13.9 ? C37 6OU 904 B 1 
HETATM 20 C C38 6OU . . . N 5 161.686 148.877 128.602 1 13.9 ? C38 6OU 904 B 1 
HETATM 21 C C39 6OU . . . N 5 160.258 148.56 128.117 1 13.9 ? C39 6OU 904 B 1 
HETATM 22 C C40 6OU . . . N 5 159.965 148.937 126.69 1 13.9 ? C40 6OU 904 B 1 
HETATM 23 C C41 6OU . . . N 5 159.152 148.285 125.842 1 13.9 ? C41 6OU 904 B 1 
HETATM 24 C C42 6OU . . . N 5 158.368 147.043 126.16 1 13.9 ? C42 6OU 904 B 1 
HETATM 25 H H23 6OU . . . N 5 163.596 146.256 127.2 1 13.9 ? H23 6OU 904 B 1 
HETATM 26 H H24 6OU . . . N 5 165.702 145.365 128.496 1 13.9 ? H24 6OU 904 B 1 
HETATM 27 H H25 6OU . . . N 5 164.751 146.432 129.045 1 13.9 ? H25 6OU 904 B 1 
HETATM 28 H H26 6OU . . . N 5 164.537 143.67 129.681 1 13.9 ? H26 6OU 904 B 1 
HETATM 29 H H27 6OU . . . N 5 163.508 144.679 130.178 1 13.9 ? H27 6OU 904 B 1 
HETATM 30 H H28 6OU . . . N 5 166.153 144.334 131.145 1 13.9 ? H28 6OU 904 B 1 
HETATM 31 H H29 6OU . . . N 5 165.61 145.755 131.279 1 13.9 ? H29 6OU 904 B 1 
HETATM 32 H H30 6OU . . . N 5 163.813 144.901 132.712 1 13.9 ? H30 6OU 904 B 1 
HETATM 33 H H31 6OU . . . N 5 164.432 143.497 132.567 1 13.9 ? H31 6OU 904 B 1 
HETATM 34 H H32 6OU . . . N 5 166.146 145.799 136.312 1 13.9 ? H32 6OU 904 B 1 
HETATM 35 H H33 6OU . . . N 5 165.533 146.639 135.168 1 13.9 ? H33 6OU 904 B 1 
HETATM 36 H H34 6OU . . . N 5 164.594 147.064 137.358 1 13.9 ? H34 6OU 904 B 1 
HETATM 37 H H35 6OU . . . N 5 164.307 144.788 138.071 1 13.9 ? H35 6OU 904 B 1 
HETATM 38 H H36 6OU . . . N 5 163.02 145.64 138.301 1 13.9 ? H36 6OU 904 B 1 
HETATM 39 H H45 6OU . . . N 5 161.974 149.893 135.362 1 13.9 ? H45 6OU 904 B 1 
HETATM 40 H H46 6OU . . . N 5 161.356 148.5 135.134 1 13.9 ? H46 6OU 904 B 1 
HETATM 41 H H47 6OU . . . N 5 162.689 150 133.126 1 13.9 ? H47 6OU 904 B 1 
HETATM 42 H H48 6OU . . . N 5 161.201 149.59 133.065 1 13.9 ? H48 6OU 904 B 1 
HETATM 43 H H49 6OU . . . N 5 162.29 147.238 132.933 1 13.9 ? H49 6OU 904 B 1 
HETATM 44 H H50 6OU . . . N 5 163.426 148.05 132.299 1 13.9 ? H50 6OU 904 B 1 
HETATM 45 H H51 6OU . . . N 5 160.807 147.752 131.201 1 13.9 ? H51 6OU 904 B 1 
HETATM 46 H H52 6OU . . . N 5 162.098 147.198 130.583 1 13.9 ? H52 6OU 904 B 1 
HETATM 47 H H53 6OU . . . N 5 161.165 149.845 130.372 1 13.9 ? H53 6OU 904 B 1 
HETATM 48 H H54 6OU . . . N 5 162.669 149.636 130.256 1 13.9 ? H54 6OU 904 B 1 
HETATM 49 H H55 6OU . . . N 5 162.036 149.62 128.085 1 13.9 ? H55 6OU 904 B 1 
HETATM 50 H H56 6OU . . . N 5 162.264 148.123 128.406 1 13.9 ? H56 6OU 904 B 1 
HETATM 51 H H57 6OU . . . N 5 159.615 148.937 128.736 1 13.9 ? H57 6OU 904 B 1 
HETATM 52 H H58 6OU . . . N 5 160.134 147.606 128.238 1 13.9 ? H58 6OU 904 B 1 
HETATM 53 H H59 6OU . . . N 5 160.405 149.699 126.387 1 13.9 ? H59 6OU 904 B 1 
HETATM 54 H H60 6OU . . . N 5 159.051 148.614 124.979 1 13.9 ? H60 6OU 904 B 1 
HETATM 55 H H62 6OU . . . N 5 157.778 147.272 126.896 1 13.9 ? H62 6OU 904 B 1 
HETATM 56 H H422 6OU . . . N 5 158.984 146.397 126.538 1 13.9 ? H422 6OU 904 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           127 
_model_server_stats.create_model_time_ms    166 
_model_server_stats.query_time_ms           214 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           56 
#