data_7RRD # _model_server_result.job_id ZC9yR06cGA--kye4jg1VeQ _model_server_result.datetime_utc '2024-11-05 13:55:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rrd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 7RRD # _exptl.entry_id 7RRD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 387.406 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[4-(1H-benzimidazol-2-yl)phenyl]-N-(4-fluorophenyl)oxetane-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RRD _cell.length_a 85.895 _cell.length_b 95.125 _cell.length_c 129.325 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RRD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 299 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 308 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 299 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 308 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.037 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C23 H18 F N3 O2' _chem_comp.formula_weight 387.406 _chem_comp.id 6IZ _chem_comp.mon_nstd_flag . _chem_comp.name 3-[4-(1H-benzimidazol-2-yl)phenyl]-N-(4-fluorophenyl)oxetane-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C24 6IZ doub 1 n y C25 C26 6IZ sing 2 n y C24 C23 6IZ sing 3 n y C26 C27 6IZ doub 4 n y C23 N22 6IZ sing 5 n y C23 C28 6IZ doub 6 n y N22 C21 6IZ sing 7 n y C27 C28 6IZ sing 8 n y C28 N29 6IZ sing 9 n y C21 N29 6IZ doub 10 n y C21 C18 6IZ sing 11 n n C19 C18 6IZ doub 12 n y C19 C20 6IZ sing 13 n y C18 C17 6IZ sing 14 n y C20 C15 6IZ doub 15 n y C17 C16 6IZ doub 16 n y C15 C16 6IZ sing 17 n y C15 C11 6IZ sing 18 n n C12 C11 6IZ sing 19 n n C12 O13 6IZ sing 20 n n C11 C14 6IZ sing 21 n n C11 C2 6IZ sing 22 n n O13 C14 6IZ sing 23 n n N3 C2 6IZ sing 24 n n N3 C4 6IZ sing 25 n n C10 C4 6IZ doub 26 n y C10 C9 6IZ sing 27 n y C2 O1 6IZ doub 28 n n C4 C5 6IZ sing 29 n y C9 C7 6IZ doub 30 n y C5 C6 6IZ doub 31 n y C7 C6 6IZ sing 32 n y C7 F8 6IZ sing 33 n n C5 H1 6IZ sing 34 n n C6 H2 6IZ sing 35 n n C12 H3 6IZ sing 36 n n C12 H4 6IZ sing 37 n n C16 H5 6IZ sing 38 n n C17 H6 6IZ sing 39 n n C19 H7 6IZ sing 40 n n N22 H8 6IZ sing 41 n n C24 H9 6IZ sing 42 n n C27 H10 6IZ sing 43 n n N3 H11 6IZ sing 44 n n C9 H12 6IZ sing 45 n n C10 H13 6IZ sing 46 n n C14 H14 6IZ sing 47 n n C14 H15 6IZ sing 48 n n C20 H16 6IZ sing 49 n n C25 H17 6IZ sing 50 n n C26 H18 6IZ sing 51 n n # _atom_sites.entry_id 7RRD _atom_sites.fract_transf_matrix[1][1] 0.011642 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010512 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6IZ A 1 501 1 6IZ INX . D 2 6IZ B 1 501 2 6IZ INX . E 3 HOH A 1 601 24 HOH HOH . E 3 HOH A 2 602 3 HOH HOH . E 3 HOH A 3 603 30 HOH HOH . E 3 HOH A 4 604 17 HOH HOH . E 3 HOH A 5 605 5 HOH HOH . E 3 HOH A 6 606 11 HOH HOH . E 3 HOH A 7 607 4 HOH HOH . E 3 HOH A 8 608 9 HOH HOH . E 3 HOH A 9 609 12 HOH HOH . E 3 HOH A 10 610 62 HOH HOH . E 3 HOH A 11 611 2 HOH HOH . E 3 HOH A 12 612 6 HOH HOH . E 3 HOH A 13 613 25 HOH HOH . E 3 HOH A 14 614 34 HOH HOH . E 3 HOH A 15 615 32 HOH HOH . E 3 HOH A 16 616 10 HOH HOH . E 3 HOH A 17 617 1 HOH HOH . E 3 HOH A 18 618 14 HOH HOH . E 3 HOH A 19 619 49 HOH HOH . F 3 HOH B 1 601 44 HOH HOH . F 3 HOH B 2 602 7 HOH HOH . F 3 HOH B 3 603 27 HOH HOH . F 3 HOH B 4 604 70 HOH HOH . F 3 HOH B 5 605 43 HOH HOH . F 3 HOH B 6 606 97 HOH HOH . F 3 HOH B 7 607 21 HOH HOH . F 3 HOH B 8 608 16 HOH HOH . F 3 HOH B 9 609 38 HOH HOH . F 3 HOH B 10 610 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 6IZ . . . D 2 72.76 13.887 32.03 1 57.1 ? C2 6IZ 501 B 1 HETATM 2 C C4 6IZ . . . D 2 74.557 15.29 31.098 1 56.15 ? C4 6IZ 501 B 1 HETATM 3 C C5 6IZ . . . D 2 74.272 16.523 31.708 1 56.76 ? C5 6IZ 501 B 1 HETATM 4 C C6 6IZ . . . D 2 75.214 17.533 31.7 1 54.63 ? C6 6IZ 501 B 1 HETATM 5 C C7 6IZ . . . D 2 76.445 17.333 31.099 1 54.16 ? C7 6IZ 501 B 1 HETATM 6 C C11 6IZ . . . D 2 71.948 12.619 31.876 1 58.21 ? C11 6IZ 501 B 1 HETATM 7 C C12 6IZ . . . D 2 72.801 11.331 32.007 1 57.17 ? C12 6IZ 501 B 1 HETATM 8 C C15 6IZ . . . D 2 71.01 12.667 30.699 1 56.44 ? C15 6IZ 501 B 1 HETATM 9 C C16 6IZ . . . D 2 69.819 13.35 30.874 1 57.22 ? C16 6IZ 501 B 1 HETATM 10 C C17 6IZ . . . D 2 68.893 13.427 29.861 1 57.18 ? C17 6IZ 501 B 1 HETATM 11 C C18 6IZ . . . D 2 69.168 12.819 28.634 1 58.3 ? C18 6IZ 501 B 1 HETATM 12 C C19 6IZ . . . D 2 70.369 12.12 28.454 1 56.57 ? C19 6IZ 501 B 1 HETATM 13 C C21 6IZ . . . D 2 68.163 12.89 27.562 1 59.17 ? C21 6IZ 501 B 1 HETATM 14 N N22 6IZ . . . D 2 68.36 12.589 26.243 1 61.67 ? N22 6IZ 501 B 1 HETATM 15 C C23 6IZ . . . D 2 67.143 12.77 25.617 1 63.7 ? C23 6IZ 501 B 1 HETATM 16 C C24 6IZ . . . D 2 66.71 12.633 24.306 1 63 ? C24 6IZ 501 B 1 HETATM 17 C C27 6IZ . . . D 2 64.893 13.436 26.264 1 63.53 ? C27 6IZ 501 B 1 HETATM 18 O O1 6IZ . . . D 2 72.557 14.596 32.992 1 58.54 ? O1 6IZ 501 B 1 HETATM 19 N N3 6IZ . . . D 2 73.684 14.187 31.076 1 55.27 ? N3 6IZ 501 B 1 HETATM 20 F F8 6IZ . . . D 2 77.347 18.329 31.103 1 56.5 ? F8 6IZ 501 B 1 HETATM 21 C C9 6IZ . . . D 2 76.744 16.121 30.498 1 53.15 ? C9 6IZ 501 B 1 HETATM 22 C C10 6IZ . . . D 2 75.808 15.102 30.499 1 53.81 ? C10 6IZ 501 B 1 HETATM 23 O O13 6IZ . . . D 2 72.432 11.337 33.399 1 58.65 ? O13 6IZ 501 B 1 HETATM 24 C C14 6IZ . . . D 2 71.234 12.09 33.154 1 57.76 ? C14 6IZ 501 B 1 HETATM 25 C C20 6IZ . . . D 2 71.289 12.05 29.484 1 55.93 ? C20 6IZ 501 B 1 HETATM 26 C C25 6IZ . . . D 2 65.388 12.89 23.979 1 63.98 ? C25 6IZ 501 B 1 HETATM 27 C C26 6IZ . . . D 2 64.485 13.293 24.964 1 63.31 ? C26 6IZ 501 B 1 HETATM 28 C C28 6IZ . . . D 2 66.228 13.175 26.608 1 63.74 ? C28 6IZ 501 B 1 HETATM 29 N N29 6IZ . . . D 2 66.911 13.222 27.767 1 63.58 ? N29 6IZ 501 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 29 #