data_7RSH # _model_server_result.job_id ArNEFkOTRMvOLz0Rb25pYg _model_server_result.datetime_utc '2024-11-04 22:43:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rsh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":515}' # _entry.id 7RSH # _exptl.entry_id 7RSH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 749.007 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 56 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RSH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RSH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 JA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N ? 3 NA N N ? 3 OA N N ? 3 PA N N ? 3 QA N N ? 3 RA N N ? 3 SA N N ? 3 TA N N ? 3 UA N N ? 3 VA N N ? 3 WA N N ? 3 XA N N ? 3 ZA N N ? 3 AB N N ? 3 BB N N ? 3 CB N N ? 3 DB N N ? 3 EB N N ? 3 FB N N ? 3 GB N N ? 3 HB N N ? 3 IB N N ? 3 JB N N ? 3 KB N N ? 3 LB N N # _chem_comp.formula 'C40 H77 O10 P' _chem_comp.formula_weight 749.007 _chem_comp.id PGW _chem_comp.mon_nstd_flag . _chem_comp.name '(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Palmitoyl-2-Oleoyl-sn-Glycero-3-[Phospho-(1-glycerol)];PHOSPHATIDYLGLYCEROL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAD C05 PGW sing 272 n n CAD HAD PGW sing 273 n n CAD HADA PGW sing 274 n n OAE CAD PGW sing 275 n n OAE HOAE PGW sing 276 n n OAF C05 PGW sing 277 n n OAF HOAF PGW sing 278 n n P O13 PGW sing 279 n n P O11 PGW sing 280 n n C01 O03 PGW sing 281 n n C01 C02 PGW sing 282 n n C01 H01 PGW sing 283 n n C01 H01A PGW sing 284 n n C1 C2 PGW sing 285 n n O01 C1 PGW sing 286 n n C02 O01 PGW sing 287 n n C02 H02 PGW sing 288 n n C2 C3 PGW sing 289 n n C2 H2 PGW sing 290 n n C2 H2A PGW sing 291 n n O02 C1 PGW doub 292 n n C03 C02 PGW sing 293 n n C03 H03 PGW sing 294 n n C03 H03A PGW sing 295 n n C3 C4 PGW sing 296 n n C3 H3 PGW sing 297 n n C3 H3A PGW sing 298 n n C04 C05 PGW sing 299 n n C04 O12 PGW sing 300 n n C04 H04 PGW sing 301 n n C04 H04A PGW sing 302 n n C4 C5 PGW sing 303 n n C4 H4 PGW sing 304 n n C4 H4A PGW sing 305 n n O04 C19 PGW doub 306 n n C05 H05 PGW sing 307 n n C5 C6 PGW sing 308 n n C5 H5 PGW sing 309 n n C5 H5A PGW sing 310 n n C06 C07 PGW sing 311 n n C06 H06 PGW sing 312 n n C06 H06A PGW sing 313 n n C6 C7 PGW sing 314 n n C6 H6 PGW sing 315 n n C6 H6A PGW sing 316 n n C07 H07 PGW sing 317 n n C07 H07A PGW sing 318 n n C7 C8 PGW sing 319 n n C7 H7 PGW sing 320 n n C7 H7A PGW sing 321 n n C08 C07 PGW sing 322 n n C08 H08 PGW sing 323 n n C08 H08A PGW sing 324 n n C8 C9 PGW sing 325 n n C8 H8 PGW sing 326 n n C8 H8A PGW sing 327 n n C09 C08 PGW sing 328 n n C09 C11 PGW sing 329 n n C09 H09 PGW sing 330 n n C09 H09A PGW sing 331 n n C9 C10 PGW doub 332 z n C10 C06 PGW sing 333 n n C11 H11 PGW sing 334 n n C11 H11A PGW sing 335 n n O11 C03 PGW sing 336 n n C12 C11 PGW sing 337 n n C12 H12 PGW sing 338 n n C12 H12A PGW sing 339 n n O12 P PGW sing 340 n n C13 C12 PGW sing 341 n n C13 C14 PGW sing 342 n n C13 H13 PGW sing 343 n n C13 H13A PGW sing 344 n n O13 HO13 PGW sing 345 n n C14 H14 PGW sing 346 n n C14 H14A PGW sing 347 n n C14 H14B PGW sing 348 n n O14 P PGW doub 349 n n C15 C16 PGW sing 350 n n C15 H15 PGW sing 351 n n C15 H15A PGW sing 352 n n C16 H16 PGW sing 353 n n C16 H16A PGW sing 354 n n C17 C16 PGW sing 355 n n C17 C18 PGW sing 356 n n C17 H17 PGW sing 357 n n C17 H17A PGW sing 358 n n C18 C28 PGW sing 359 n n C18 H18 PGW sing 360 n n C18 H18A PGW sing 361 n n C19 O03 PGW sing 362 n n C19 C20 PGW sing 363 n n C20 C21 PGW sing 364 n n C20 H20 PGW sing 365 n n C20 H20A PGW sing 366 n n C21 C22 PGW sing 367 n n C21 H21 PGW sing 368 n n C21 H21A PGW sing 369 n n C22 C23 PGW sing 370 n n C22 H22 PGW sing 371 n n C22 H22A PGW sing 372 n n C23 C24 PGW sing 373 n n C23 H23 PGW sing 374 n n C23 H23A PGW sing 375 n n C24 C25 PGW sing 376 n n C24 H24 PGW sing 377 n n C24 H24A PGW sing 378 n n C25 C26 PGW sing 379 n n C25 H25 PGW sing 380 n n C25 H25A PGW sing 381 n n C26 C27 PGW sing 382 n n C26 H26 PGW sing 383 n n C26 H26A PGW sing 384 n n C27 C15 PGW sing 385 n n C27 H27 PGW sing 386 n n C27 H27A PGW sing 387 n n C28 H28 PGW sing 388 n n C28 H28A PGW sing 389 n n C29 H29 PGW sing 390 n n C29 H29A PGW sing 391 n n C29 H29B PGW sing 392 n n C30 C28 PGW sing 393 n n C30 C29 PGW sing 394 n n C30 H30 PGW sing 395 n n C30 H30A PGW sing 396 n n C9 H9 PGW sing 397 n n C10 H10 PGW sing 398 n n # _atom_sites.entry_id 7RSH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CMP A 1 501 500 CMP CMP . F 3 PGW A 1 502 501 PGW PGW . G 3 PGW A 1 503 502 PGW PGW . H 3 PGW A 1 504 503 PGW PGW . I 3 PGW A 1 505 504 PGW PGW . J 3 PGW A 1 506 505 PGW PGW . K 3 PGW A 1 507 506 PGW PGW . L 3 PGW A 1 508 507 PGW PGW . M 3 PGW A 1 509 508 PGW PGW . N 3 PGW A 1 510 510 PGW PGW . O 3 PGW A 1 511 511 PGW PGW . P 3 PGW A 1 512 512 PGW PGW . Q 3 PGW A 1 513 513 PGW PGW . R 3 PGW A 1 514 514 PGW PGW . S 3 PGW A 1 515 509 PGW PGW . T 2 CMP B 1 501 500 CMP CMP . U 3 PGW B 1 502 501 PGW PGW . V 3 PGW B 1 503 502 PGW PGW . W 3 PGW B 1 504 503 PGW PGW . X 3 PGW B 1 505 504 PGW PGW . Y 3 PGW B 1 506 505 PGW PGW . Z 3 PGW B 1 507 506 PGW PGW . AA 3 PGW B 1 508 507 PGW PGW . BA 3 PGW B 1 509 508 PGW PGW . CA 3 PGW B 1 510 510 PGW PGW . DA 3 PGW B 1 511 511 PGW PGW . EA 3 PGW B 1 512 512 PGW PGW . FA 3 PGW B 1 513 513 PGW PGW . GA 3 PGW B 1 514 514 PGW PGW . HA 3 PGW B 1 515 509 PGW PGW . IA 2 CMP C 1 501 500 CMP CMP . JA 3 PGW C 1 502 501 PGW PGW . KA 3 PGW C 1 503 502 PGW PGW . LA 3 PGW C 1 504 503 PGW PGW . MA 3 PGW C 1 505 504 PGW PGW . NA 3 PGW C 1 506 505 PGW PGW . OA 3 PGW C 1 507 506 PGW PGW . PA 3 PGW C 1 508 507 PGW PGW . QA 3 PGW C 1 509 508 PGW PGW . RA 3 PGW C 1 510 510 PGW PGW . SA 3 PGW C 1 511 511 PGW PGW . TA 3 PGW C 1 512 512 PGW PGW . UA 3 PGW C 1 513 513 PGW PGW . VA 3 PGW C 1 514 514 PGW PGW . WA 3 PGW C 1 515 509 PGW PGW . XA 3 PGW D 1 501 509 PGW PGW . YA 2 CMP D 1 502 500 CMP CMP . ZA 3 PGW D 1 503 501 PGW PGW . AB 3 PGW D 1 504 502 PGW PGW . BB 3 PGW D 1 505 503 PGW PGW . CB 3 PGW D 1 506 504 PGW PGW . DB 3 PGW D 1 507 505 PGW PGW . EB 3 PGW D 1 508 506 PGW PGW . FB 3 PGW D 1 509 507 PGW PGW . GB 3 PGW D 1 510 508 PGW PGW . HB 3 PGW D 1 511 510 PGW PGW . IB 3 PGW D 1 512 511 PGW PGW . JB 3 PGW D 1 513 512 PGW PGW . KB 3 PGW D 1 514 513 PGW PGW . LB 3 PGW D 1 515 514 PGW PGW . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 PGW . . . S 3 134.067 147.241 134.039 1 48.43 ? C15 PGW 515 A 1 HETATM 2 C C16 PGW . . . S 3 134.142 148.342 135.092 1 48.43 ? C16 PGW 515 A 1 HETATM 3 C C17 PGW . . . S 3 133.832 147.74 136.462 1 48.43 ? C17 PGW 515 A 1 HETATM 4 C C18 PGW . . . S 3 133.822 148.841 137.52 1 48.43 ? C18 PGW 515 A 1 HETATM 5 C C20 PGW . . . S 3 135.879 143.905 126.598 1 48.43 ? C20 PGW 515 A 1 HETATM 6 C C21 PGW . . . S 3 134.769 144.789 127.161 1 48.43 ? C21 PGW 515 A 1 HETATM 7 C C22 PGW . . . S 3 134.35 144.271 128.537 1 48.43 ? C22 PGW 515 A 1 HETATM 8 C C23 PGW . . . S 3 135.304 144.819 129.598 1 48.43 ? C23 PGW 515 A 1 HETATM 9 C C24 PGW . . . S 3 135.251 146.346 129.579 1 48.43 ? C24 PGW 515 A 1 HETATM 10 C C25 PGW . . . S 3 136.043 146.902 130.762 1 48.43 ? C25 PGW 515 A 1 HETATM 11 C C26 PGW . . . S 3 135.377 146.474 132.068 1 48.43 ? C26 PGW 515 A 1 HETATM 12 C C27 PGW . . . S 3 134.768 147.694 132.76 1 48.43 ? C27 PGW 515 A 1 HETATM 13 C C28 PGW . . . S 3 133.337 148.264 138.849 1 48.43 ? C28 PGW 515 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #