data_7RTY # _model_server_result.job_id NbleFeA8clRy8Liq1fb8IA _model_server_result.datetime_utc '2024-11-14 05:38:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rty # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 7RTY # _exptl.entry_id 7RTY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RTY _cell.length_a 106.831 _cell.length_b 106.831 _cell.length_c 83.01 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RTY _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 9 A HIS 22 1_555 C FE FE2 . A FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.884 ? metalc ? metalc2 A NE2 HIS 11 A HIS 24 1_555 C FE FE2 . A FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc3 A NE2 HIS 46 A HIS 59 1_555 D FE FE2 . A FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? metalc ? metalc4 A OE1 GLU 87 A GLU 100 1_555 C FE FE2 . A FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc5 A OD1 ASP 187 A ASP 200 1_555 C FE FE2 . A FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc6 A NE2 HIS 189 A HIS 202 1_555 D FE FE2 . A FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc7 C FE FE2 . A FE2 500 1_555 G O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc8 D FE FE2 . A FE2 501 1_555 G O HOH . A HOH 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc9 D FE FE2 . A FE2 501 1_555 G O HOH . A HOH 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc10 B NE2 HIS 9 B HIS 22 1_555 E FE FE2 . B FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? metalc ? metalc11 B NE2 HIS 11 B HIS 24 1_555 E FE FE2 . B FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc12 B NE2 HIS 46 B HIS 59 1_555 F FE FE2 . B FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? metalc ? metalc13 B OE1 GLU 87 B GLU 100 1_555 E FE FE2 . B FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc14 B OD1 ASP 187 B ASP 200 1_555 E FE FE2 . B FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc15 B NE2 HIS 189 B HIS 202 1_555 F FE FE2 . B FE2 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc16 E FE FE2 . B FE2 500 1_555 H O HOH . B HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.735 ? metalc ? metalc17 F FE FE2 . B FE2 501 1_555 H O HOH . B HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc18 F FE FE2 . B FE2 501 1_555 H O HOH . B HOH 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7RTY _atom_sites.fract_transf_matrix[1][1] 0.009361 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012047 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE2 A 1 500 500 FE2 FE . D 2 FE2 A 1 501 501 FE2 FE . E 2 FE2 B 1 500 500 FE2 FE . F 2 FE2 B 1 501 501 FE2 FE . G 3 HOH A 1 601 24 HOH HOH . G 3 HOH A 2 602 114 HOH HOH . G 3 HOH A 3 603 64 HOH HOH . G 3 HOH A 4 604 79 HOH HOH . G 3 HOH A 5 605 54 HOH HOH . G 3 HOH A 6 606 202 HOH HOH . G 3 HOH A 7 607 87 HOH HOH . G 3 HOH A 8 608 39 HOH HOH . G 3 HOH A 9 609 112 HOH HOH . G 3 HOH A 10 610 41 HOH HOH . G 3 HOH A 11 611 105 HOH HOH . G 3 HOH A 12 612 33 HOH HOH . G 3 HOH A 13 613 30 HOH HOH . G 3 HOH A 14 614 43 HOH HOH . G 3 HOH A 15 615 60 HOH HOH . G 3 HOH A 16 616 34 HOH HOH . G 3 HOH A 17 617 12 HOH HOH . G 3 HOH A 18 618 204 HOH HOH . G 3 HOH A 19 619 123 HOH HOH . G 3 HOH A 20 620 28 HOH HOH . G 3 HOH A 21 621 9 HOH HOH . G 3 HOH A 22 622 16 HOH HOH . G 3 HOH A 23 623 75 HOH HOH . G 3 HOH A 24 624 7 HOH HOH . G 3 HOH A 25 625 48 HOH HOH . G 3 HOH A 26 626 19 HOH HOH . G 3 HOH A 27 627 118 HOH HOH . G 3 HOH A 28 628 98 HOH HOH . G 3 HOH A 29 629 58 HOH HOH . G 3 HOH A 30 630 102 HOH HOH . G 3 HOH A 31 631 13 HOH HOH . G 3 HOH A 32 632 107 HOH HOH . G 3 HOH A 33 633 29 HOH HOH . G 3 HOH A 34 634 99 HOH HOH . G 3 HOH A 35 635 50 HOH HOH . G 3 HOH A 36 636 69 HOH HOH . G 3 HOH A 37 637 108 HOH HOH . G 3 HOH A 38 638 27 HOH HOH . G 3 HOH A 39 639 40 HOH HOH . G 3 HOH A 40 640 10 HOH HOH . G 3 HOH A 41 641 3 HOH HOH . G 3 HOH A 42 642 55 HOH HOH . G 3 HOH A 43 643 62 HOH HOH . G 3 HOH A 44 644 20 HOH HOH . G 3 HOH A 45 645 37 HOH HOH . G 3 HOH A 46 646 90 HOH HOH . G 3 HOH A 47 647 21 HOH HOH . G 3 HOH A 48 648 46 HOH HOH . G 3 HOH A 49 649 101 HOH HOH . G 3 HOH A 50 650 113 HOH HOH . G 3 HOH A 51 651 8 HOH HOH . G 3 HOH A 52 652 73 HOH HOH . G 3 HOH A 53 653 83 HOH HOH . G 3 HOH A 54 654 85 HOH HOH . G 3 HOH A 55 655 103 HOH HOH . G 3 HOH A 56 656 77 HOH HOH . G 3 HOH A 57 657 201 HOH HOH . G 3 HOH A 58 658 42 HOH HOH . G 3 HOH A 59 659 67 HOH HOH . G 3 HOH A 60 660 205 HOH HOH . G 3 HOH A 61 661 106 HOH HOH . G 3 HOH A 62 662 17 HOH HOH . G 3 HOH A 63 663 119 HOH HOH . G 3 HOH A 64 664 124 HOH HOH . G 3 HOH A 65 665 122 HOH HOH . G 3 HOH A 66 666 86 HOH HOH . G 3 HOH A 67 667 38 HOH HOH . G 3 HOH A 68 668 111 HOH HOH . G 3 HOH A 69 669 84 HOH HOH . G 3 HOH A 70 670 104 HOH HOH . G 3 HOH A 71 671 89 HOH HOH . H 3 HOH B 1 601 65 HOH HOH . H 3 HOH B 2 602 63 HOH HOH . H 3 HOH B 3 603 116 HOH HOH . H 3 HOH B 4 604 49 HOH HOH . H 3 HOH B 5 605 32 HOH HOH . H 3 HOH B 6 606 31 HOH HOH . H 3 HOH B 7 607 78 HOH HOH . H 3 HOH B 8 608 23 HOH HOH . H 3 HOH B 9 609 51 HOH HOH . H 3 HOH B 10 610 25 HOH HOH . H 3 HOH B 11 611 61 HOH HOH . H 3 HOH B 12 612 35 HOH HOH . H 3 HOH B 13 613 76 HOH HOH . H 3 HOH B 14 614 110 HOH HOH . H 3 HOH B 15 615 47 HOH HOH . H 3 HOH B 16 616 14 HOH HOH . H 3 HOH B 17 617 26 HOH HOH . H 3 HOH B 18 618 5 HOH HOH . H 3 HOH B 19 619 56 HOH HOH . H 3 HOH B 20 620 203 HOH HOH . H 3 HOH B 21 621 72 HOH HOH . H 3 HOH B 22 622 100 HOH HOH . H 3 HOH B 23 623 82 HOH HOH . H 3 HOH B 24 624 120 HOH HOH . H 3 HOH B 25 625 57 HOH HOH . H 3 HOH B 26 626 6 HOH HOH . H 3 HOH B 27 627 53 HOH HOH . H 3 HOH B 28 628 91 HOH HOH . H 3 HOH B 29 629 121 HOH HOH . H 3 HOH B 30 630 59 HOH HOH . H 3 HOH B 31 631 207 HOH HOH . H 3 HOH B 32 632 71 HOH HOH . H 3 HOH B 33 633 81 HOH HOH . H 3 HOH B 34 634 18 HOH HOH . H 3 HOH B 35 635 66 HOH HOH . H 3 HOH B 36 636 74 HOH HOH . H 3 HOH B 37 637 93 HOH HOH . H 3 HOH B 38 638 11 HOH HOH . H 3 HOH B 39 639 45 HOH HOH . H 3 HOH B 40 640 206 HOH HOH . H 3 HOH B 41 641 109 HOH HOH . H 3 HOH B 42 642 36 HOH HOH . H 3 HOH B 43 643 96 HOH HOH . H 3 HOH B 44 644 15 HOH HOH . H 3 HOH B 45 645 80 HOH HOH . H 3 HOH B 46 646 70 HOH HOH . H 3 HOH B 47 647 88 HOH HOH . H 3 HOH B 48 648 92 HOH HOH . H 3 HOH B 49 649 115 HOH HOH . H 3 HOH B 50 650 52 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -20.486 _atom_site.Cartn_y -13.159 _atom_site.Cartn_z 24.388 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #