data_7RV7 # _model_server_result.job_id aA3ydiDkb7uZYdBj1YIikA _model_server_result.datetime_utc '2025-01-03 00:59:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7RV7 # _exptl.entry_id 7RV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 538.945 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-chloropyridin-4-yl)-2-{5-(3-cyano-4-hydroxyphenyl)-3-[3-(1-methyl-1H-pyrazol-4-yl)prop-2-yn-1-yl]-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl}acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.92 _cell.angle_gamma 90 _cell.entry_id 7RV7 _cell.length_a 30.556 _cell.length_b 74.943 _cell.length_c 53.083 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -13.667286 0 51.293374 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 73 A ASP 75 1_555 E CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc2 A OD1 ASP 73 A ASP 75 1_555 E CA CA . A CA 204 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc3 D O1 GOL . A GOL 203 1_555 E CA CA . A CA 204 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc4 D O2 GOL . A GOL 203 1_555 E CA CA . A CA 204 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc5 D O3 GOL . A GOL 203 1_555 E CA CA . A CA 204 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? # _chem_comp.formula 'C27 H19 Cl N8 O3' _chem_comp.formula_weight 538.945 _chem_comp.id 7SH _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-chloropyridin-4-yl)-2-{5-(3-cyano-4-hydroxyphenyl)-3-[3-(1-methyl-1H-pyrazol-4-yl)prop-2-yn-1-yl]-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL10 C09 7SH sing 1 n n C08 C09 7SH doub 2 n y C08 N07 7SH sing 3 n y C09 C04 7SH sing 4 n y N07 C06 7SH doub 5 n y C17 C16 7SH doub 6 n y C17 C18 7SH sing 7 n y C06 C05 7SH sing 8 n y C04 N03 7SH sing 9 n n C04 C05 7SH doub 10 n y O19 C18 7SH sing 11 n n C16 C15 7SH sing 12 n y N03 C02 7SH sing 13 n n C18 C20 7SH doub 14 n y C02 O01 7SH doub 15 n n C02 C11 7SH sing 16 n n C13 C14 7SH doub 17 n y C13 N12 7SH sing 18 n y C15 C14 7SH sing 19 n n C15 C23 7SH doub 20 n y C20 C23 7SH sing 21 n y C20 C21 7SH sing 22 n n C11 N12 7SH sing 23 n n C14 C25 7SH sing 24 n y N12 C24 7SH sing 25 n y C21 N22 7SH trip 26 n n C24 C25 7SH doub 27 n y C24 N38 7SH sing 28 n n C25 C26 7SH sing 29 n n N38 C37 7SH doub 30 n n C26 O39 7SH doub 31 n n C26 N27 7SH sing 32 n n C37 N27 7SH sing 33 n n N27 C28 7SH sing 34 n n C28 C29 7SH sing 35 n n C29 C30 7SH trip 36 n n C30 C31 7SH sing 37 n n C31 C36 7SH sing 38 n y C31 C32 7SH doub 39 n y C36 N35 7SH doub 40 n y C32 N33 7SH sing 41 n y N35 N33 7SH sing 42 n y N33 C34 7SH sing 43 n n C11 H1 7SH sing 44 n n C11 H2 7SH sing 45 n n C13 H3 7SH sing 46 n n C05 H4 7SH sing 47 n n C06 H5 7SH sing 48 n n C08 H6 7SH sing 49 n n C16 H7 7SH sing 50 n n C17 H8 7SH sing 51 n n C23 H9 7SH sing 52 n n C28 H10 7SH sing 53 n n C28 H11 7SH sing 54 n n C32 H12 7SH sing 55 n n C34 H13 7SH sing 56 n n C34 H14 7SH sing 57 n n C34 H15 7SH sing 58 n n C36 H16 7SH sing 59 n n C37 H17 7SH sing 60 n n N03 H18 7SH sing 61 n n O19 H19 7SH sing 62 n n # _atom_sites.entry_id 7RV7 _atom_sites.fract_transf_matrix[1][1] 0.032727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00872 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7SH A 1 201 201 7SH 322 . C 3 GOL A 1 202 202 GOL GOL . D 3 GOL A 1 203 203 GOL GOL . E 4 CA A 1 204 204 CA CA . F 5 HOH A 1 301 330 HOH HOH . F 5 HOH A 2 302 364 HOH HOH . F 5 HOH A 3 303 325 HOH HOH . F 5 HOH A 4 304 349 HOH HOH . F 5 HOH A 5 305 357 HOH HOH . F 5 HOH A 6 306 331 HOH HOH . F 5 HOH A 7 307 374 HOH HOH . F 5 HOH A 8 308 351 HOH HOH . F 5 HOH A 9 309 314 HOH HOH . F 5 HOH A 10 310 372 HOH HOH . F 5 HOH A 11 311 348 HOH HOH . F 5 HOH A 12 312 311 HOH HOH . F 5 HOH A 13 313 361 HOH HOH . F 5 HOH A 14 314 309 HOH HOH . F 5 HOH A 15 315 346 HOH HOH . F 5 HOH A 16 316 355 HOH HOH . F 5 HOH A 17 317 375 HOH HOH . F 5 HOH A 18 318 312 HOH HOH . F 5 HOH A 19 319 332 HOH HOH . F 5 HOH A 20 320 307 HOH HOH . F 5 HOH A 21 321 302 HOH HOH . F 5 HOH A 22 322 321 HOH HOH . F 5 HOH A 23 323 344 HOH HOH . F 5 HOH A 24 324 308 HOH HOH . F 5 HOH A 25 325 370 HOH HOH . F 5 HOH A 26 326 380 HOH HOH . F 5 HOH A 27 327 334 HOH HOH . F 5 HOH A 28 328 382 HOH HOH . F 5 HOH A 29 329 305 HOH HOH . F 5 HOH A 30 330 301 HOH HOH . F 5 HOH A 31 331 303 HOH HOH . F 5 HOH A 32 332 365 HOH HOH . F 5 HOH A 33 333 347 HOH HOH . F 5 HOH A 34 334 320 HOH HOH . F 5 HOH A 35 335 316 HOH HOH . F 5 HOH A 36 336 313 HOH HOH . F 5 HOH A 37 337 310 HOH HOH . F 5 HOH A 38 338 339 HOH HOH . F 5 HOH A 39 339 333 HOH HOH . F 5 HOH A 40 340 322 HOH HOH . F 5 HOH A 41 341 377 HOH HOH . F 5 HOH A 42 342 336 HOH HOH . F 5 HOH A 43 343 306 HOH HOH . F 5 HOH A 44 344 378 HOH HOH . F 5 HOH A 45 345 319 HOH HOH . F 5 HOH A 46 346 356 HOH HOH . F 5 HOH A 47 347 328 HOH HOH . F 5 HOH A 48 348 341 HOH HOH . F 5 HOH A 49 349 329 HOH HOH . F 5 HOH A 50 350 373 HOH HOH . F 5 HOH A 51 351 315 HOH HOH . F 5 HOH A 52 352 343 HOH HOH . F 5 HOH A 53 353 324 HOH HOH . F 5 HOH A 54 354 318 HOH HOH . F 5 HOH A 55 355 354 HOH HOH . F 5 HOH A 56 356 337 HOH HOH . F 5 HOH A 57 357 323 HOH HOH . F 5 HOH A 58 358 327 HOH HOH . F 5 HOH A 59 359 317 HOH HOH . F 5 HOH A 60 360 353 HOH HOH . F 5 HOH A 61 361 304 HOH HOH . F 5 HOH A 62 362 368 HOH HOH . F 5 HOH A 63 363 350 HOH HOH . F 5 HOH A 64 364 352 HOH HOH . F 5 HOH A 65 365 381 HOH HOH . F 5 HOH A 66 366 369 HOH HOH . F 5 HOH A 67 367 345 HOH HOH . F 5 HOH A 68 368 362 HOH HOH . F 5 HOH A 69 369 366 HOH HOH . F 5 HOH A 70 370 342 HOH HOH . F 5 HOH A 71 371 363 HOH HOH . F 5 HOH A 72 372 379 HOH HOH . F 5 HOH A 73 373 367 HOH HOH . F 5 HOH A 74 374 358 HOH HOH . F 5 HOH A 75 375 326 HOH HOH . F 5 HOH A 76 376 335 HOH HOH . F 5 HOH A 77 377 340 HOH HOH . F 5 HOH A 78 378 359 HOH HOH . F 5 HOH A 79 379 360 HOH HOH . F 5 HOH A 80 380 338 HOH HOH . F 5 HOH A 81 381 371 HOH HOH . F 5 HOH A 82 382 376 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 7SH . . . B 2 -2.606 -6.387 37.365 0.91 13.78 ? C11 7SH 201 A 1 HETATM 2 C C13 7SH . . . B 2 -3.914 -4.437 36.932 0.91 17.27 ? C13 7SH 201 A 1 HETATM 3 C C14 7SH . . . B 2 -4.277 -3.244 37.626 0.91 12.43 ? C14 7SH 201 A 1 HETATM 4 C C02 7SH . . . B 2 -1.205 -6.252 36.765 0.91 16.98 ? C02 7SH 201 A 1 HETATM 5 C C04 7SH . . . B 2 0.329 -7.428 35.205 0.91 15.45 ? C04 7SH 201 A 1 HETATM 6 C C05 7SH . . . B 2 1.515 -7.042 35.84 0.91 21.84 ? C05 7SH 201 A 1 HETATM 7 C C06 7SH . . . B 2 2.718 -7.32 35.197 0.91 19.77 ? C06 7SH 201 A 1 HETATM 8 C C08 7SH . . . B 2 1.602 -8.39 33.43 0.91 13.94 ? C08 7SH 201 A 1 HETATM 9 C C09 7SH . . . B 2 0.399 -8.144 34.036 0.91 12.68 ? C09 7SH 201 A 1 HETATM 10 C C15 7SH . . . B 2 -5.158 -2.225 37.002 0.91 15.74 ? C15 7SH 201 A 1 HETATM 11 C C16 7SH . . . B 2 -5.047 -2.012 35.645 0.91 14.26 ? C16 7SH 201 A 1 HETATM 12 C C17 7SH . . . B 2 -5.926 -1.049 35.068 0.91 20.95 ? C17 7SH 201 A 1 HETATM 13 C C18 7SH . . . B 2 -6.845 -0.379 35.876 0.91 17.25 ? C18 7SH 201 A 1 HETATM 14 C C20 7SH . . . B 2 -6.926 -0.642 37.235 0.91 13.75 ? C20 7SH 201 A 1 HETATM 15 C C21 7SH . . . B 2 -7.926 0.047 38.141 0.91 16.22 ? C21 7SH 201 A 1 HETATM 16 C C23 7SH . . . B 2 -6.104 -1.601 37.802 0.91 14.69 ? C23 7SH 201 A 1 HETATM 17 C C24 7SH . . . B 2 -2.984 -4.536 38.953 0.91 14.28 ? C24 7SH 201 A 1 HETATM 18 C C25 7SH . . . B 2 -3.681 -3.296 38.965 0.91 9.09 ? C25 7SH 201 A 1 HETATM 19 C C26 7SH . . . B 2 -3.682 -2.447 40.19 0.91 12.47 ? C26 7SH 201 A 1 HETATM 20 C C28 7SH . . . B 2 -2.693 -2.226 42.467 0.91 12.81 ? C28 7SH 201 A 1 HETATM 21 C C29 7SH . . . B 2 -3.728 -2.263 43.495 0.91 13.13 ? C29 7SH 201 A 1 HETATM 22 C C30 7SH . . . B 2 -4.463 -2.182 44.374 0.91 16.51 ? C30 7SH 201 A 1 HETATM 23 C C31 7SH . . . B 2 -5.305 -2.118 45.557 0.91 17.6 ? C31 7SH 201 A 1 HETATM 24 C C32 7SH . . . B 2 -5.09 -2.858 46.733 0.91 23.35 ? C32 7SH 201 A 1 HETATM 25 C C34 7SH . . . B 2 -6.321 -2.998 48.855 0.91 25.45 ? C34 7SH 201 A 1 HETATM 26 C C36 7SH . . . B 2 -6.398 -1.338 45.67 0.91 20.38 ? C36 7SH 201 A 1 HETATM 27 C C37 7SH . . . B 2 -2.2 -4.212 41.196 0.91 17.95 ? C37 7SH 201 A 1 HETATM 28 N N03 7SH . . . B 2 -0.901 -7.246 35.813 0.91 14.85 ? N03 7SH 201 A 1 HETATM 29 N N07 7SH . . . B 2 2.761 -7.977 34.049 0.91 18.25 ? N07 7SH 201 A 1 HETATM 30 N N12 7SH . . . B 2 -3.123 -5.104 37.746 0.91 15.83 ? N12 7SH 201 A 1 HETATM 31 N N22 7SH . . . B 2 -8.636 0.516 38.859 0.91 18.06 ? N22 7SH 201 A 1 HETATM 32 N N27 7SH . . . B 2 -2.897 -2.984 41.231 0.91 14.98 ? N27 7SH 201 A 1 HETATM 33 N N33 7SH . . . B 2 -6.097 -2.498 47.519 0.91 22.99 ? N33 7SH 201 A 1 HETATM 34 N N35 7SH . . . B 2 -6.892 -1.589 46.93 0.91 20.86 ? N35 7SH 201 A 1 HETATM 35 N N38 7SH . . . B 2 -2.208 -5.068 40.036 0.91 13.73 ? N38 7SH 201 A 1 HETATM 36 O O01 7SH . . . B 2 -0.491 -5.353 37.074 0.91 17.4 ? O01 7SH 201 A 1 HETATM 37 O O19 7SH . . . B 2 -7.701 0.575 35.355 0.91 14.81 ? O19 7SH 201 A 1 HETATM 38 O O39 7SH . . . B 2 -4.25 -1.328 40.325 0.91 15.95 ? O39 7SH 201 A 1 HETATM 39 CL CL10 7SH . . . B 2 -1.107 -8.647 33.279 0.91 17.99 ? CL10 7SH 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 39 #