data_7RV7
#
_model_server_result.job_id            LFBk8DeclTxSL-DIAdR_lg 
_model_server_result.datetime_utc      '2024-10-19 09:24:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7rv7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    7RV7 
#
_exptl.entry_id    7RV7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.92 
_cell.angle_gamma         90 
_cell.entry_id            7RV7 
_cell.length_a            30.556 
_cell.length_b            74.943 
_cell.length_c            53.083 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RV7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -13.667286 0 51.293374 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 73 A ASP 75 1_555 E CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
metalc ? metalc2 A OD1 ASP 73 A ASP 75 1_555 E CA CA . A CA 204 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
metalc ? metalc3 D O1 GOL . A GOL 203 1_555 E CA CA . A CA 204 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
metalc ? metalc4 D O2 GOL . A GOL 203 1_555 E CA CA . A CA 204 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
metalc ? metalc5 D O3 GOL . A GOL 203 1_555 E CA CA . A CA 204 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 191 n n 
C1 C2 GOL sing 192 n n 
C1 H11 GOL sing 193 n n 
C1 H12 GOL sing 194 n n 
O1 HO1 GOL sing 195 n n 
C2 O2 GOL sing 196 n n 
C2 C3 GOL sing 197 n n 
C2 H2 GOL sing 198 n n 
O2 HO2 GOL sing 199 n n 
C3 O3 GOL sing 200 n n 
C3 H31 GOL sing 201 n n 
C3 H32 GOL sing 202 n n 
O3 HO3 GOL sing 203 n n 
#
_atom_sites.entry_id                     7RV7 
_atom_sites.fract_transf_matrix[1][1]    0.032727 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00872 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013343 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019496 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 7SH A 1 201 201 7SH 322 . 
C 3 GOL A 1 202 202 GOL GOL . 
D 3 GOL A 1 203 203 GOL GOL . 
E 4 CA A 1 204 204 CA CA . 
F 5 HOH A 1 301 330 HOH HOH . 
F 5 HOH A 2 302 364 HOH HOH . 
F 5 HOH A 3 303 325 HOH HOH . 
F 5 HOH A 4 304 349 HOH HOH . 
F 5 HOH A 5 305 357 HOH HOH . 
F 5 HOH A 6 306 331 HOH HOH . 
F 5 HOH A 7 307 374 HOH HOH . 
F 5 HOH A 8 308 351 HOH HOH . 
F 5 HOH A 9 309 314 HOH HOH . 
F 5 HOH A 10 310 372 HOH HOH . 
F 5 HOH A 11 311 348 HOH HOH . 
F 5 HOH A 12 312 311 HOH HOH . 
F 5 HOH A 13 313 361 HOH HOH . 
F 5 HOH A 14 314 309 HOH HOH . 
F 5 HOH A 15 315 346 HOH HOH . 
F 5 HOH A 16 316 355 HOH HOH . 
F 5 HOH A 17 317 375 HOH HOH . 
F 5 HOH A 18 318 312 HOH HOH . 
F 5 HOH A 19 319 332 HOH HOH . 
F 5 HOH A 20 320 307 HOH HOH . 
F 5 HOH A 21 321 302 HOH HOH . 
F 5 HOH A 22 322 321 HOH HOH . 
F 5 HOH A 23 323 344 HOH HOH . 
F 5 HOH A 24 324 308 HOH HOH . 
F 5 HOH A 25 325 370 HOH HOH . 
F 5 HOH A 26 326 380 HOH HOH . 
F 5 HOH A 27 327 334 HOH HOH . 
F 5 HOH A 28 328 382 HOH HOH . 
F 5 HOH A 29 329 305 HOH HOH . 
F 5 HOH A 30 330 301 HOH HOH . 
F 5 HOH A 31 331 303 HOH HOH . 
F 5 HOH A 32 332 365 HOH HOH . 
F 5 HOH A 33 333 347 HOH HOH . 
F 5 HOH A 34 334 320 HOH HOH . 
F 5 HOH A 35 335 316 HOH HOH . 
F 5 HOH A 36 336 313 HOH HOH . 
F 5 HOH A 37 337 310 HOH HOH . 
F 5 HOH A 38 338 339 HOH HOH . 
F 5 HOH A 39 339 333 HOH HOH . 
F 5 HOH A 40 340 322 HOH HOH . 
F 5 HOH A 41 341 377 HOH HOH . 
F 5 HOH A 42 342 336 HOH HOH . 
F 5 HOH A 43 343 306 HOH HOH . 
F 5 HOH A 44 344 378 HOH HOH . 
F 5 HOH A 45 345 319 HOH HOH . 
F 5 HOH A 46 346 356 HOH HOH . 
F 5 HOH A 47 347 328 HOH HOH . 
F 5 HOH A 48 348 341 HOH HOH . 
F 5 HOH A 49 349 329 HOH HOH . 
F 5 HOH A 50 350 373 HOH HOH . 
F 5 HOH A 51 351 315 HOH HOH . 
F 5 HOH A 52 352 343 HOH HOH . 
F 5 HOH A 53 353 324 HOH HOH . 
F 5 HOH A 54 354 318 HOH HOH . 
F 5 HOH A 55 355 354 HOH HOH . 
F 5 HOH A 56 356 337 HOH HOH . 
F 5 HOH A 57 357 323 HOH HOH . 
F 5 HOH A 58 358 327 HOH HOH . 
F 5 HOH A 59 359 317 HOH HOH . 
F 5 HOH A 60 360 353 HOH HOH . 
F 5 HOH A 61 361 304 HOH HOH . 
F 5 HOH A 62 362 368 HOH HOH . 
F 5 HOH A 63 363 350 HOH HOH . 
F 5 HOH A 64 364 352 HOH HOH . 
F 5 HOH A 65 365 381 HOH HOH . 
F 5 HOH A 66 366 369 HOH HOH . 
F 5 HOH A 67 367 345 HOH HOH . 
F 5 HOH A 68 368 362 HOH HOH . 
F 5 HOH A 69 369 366 HOH HOH . 
F 5 HOH A 70 370 342 HOH HOH . 
F 5 HOH A 71 371 363 HOH HOH . 
F 5 HOH A 72 372 379 HOH HOH . 
F 5 HOH A 73 373 367 HOH HOH . 
F 5 HOH A 74 374 358 HOH HOH . 
F 5 HOH A 75 375 326 HOH HOH . 
F 5 HOH A 76 376 335 HOH HOH . 
F 5 HOH A 77 377 340 HOH HOH . 
F 5 HOH A 78 378 359 HOH HOH . 
F 5 HOH A 79 379 360 HOH HOH . 
F 5 HOH A 80 380 338 HOH HOH . 
F 5 HOH A 81 381 371 HOH HOH . 
F 5 HOH A 82 382 376 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 16.022 18.941 2.957 0.84 21.4 ? C1 GOL 203 A 1 
HETATM 2 O O1 GOL . . . D 3 16.498 18.971 1.636 0.84 19.32 ? O1 GOL 203 A 1 
HETATM 3 C C2 GOL . . . D 3 14.775 19.831 3.019 0.84 22.51 ? C2 GOL 203 A 1 
HETATM 4 O O2 GOL . . . D 3 14.94 21.009 2.325 0.84 20.24 ? O2 GOL 203 A 1 
HETATM 5 C C3 GOL . . . D 3 13.578 18.995 2.492 0.84 30.81 ? C3 GOL 203 A 1 
HETATM 6 O O3 GOL . . . D 3 13.596 18.952 1.083 0.84 20.59 ? O3 GOL 203 A 1 
HETATM 7 H H11 GOL . . . D 3 16.677 19.264 3.596 0.84 25.72 ? H11 GOL 203 A 1 
HETATM 8 H H12 GOL . . . D 3 15.789 18.044 3.247 0.84 25.72 ? H12 GOL 203 A 1 
HETATM 9 H H2 GOL . . . D 3 14.613 20.076 3.943 0.84 27.06 ? H2 GOL 203 A 1 
HETATM 10 H H31 GOL . . . D 3 12.764 19.389 2.844 0.84 37.01 ? H31 GOL 203 A 1 
HETATM 11 H H32 GOL . . . D 3 13.631 18.115 2.894 0.84 37.01 ? H32 GOL 203 A 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           11 
#