data_7RVZ # _model_server_result.job_id ufzKU03IzOKyw72r1HQ4-A _model_server_result.datetime_utc '2024-10-19 12:39:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rvz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7RVZ # _exptl.entry_id 7RVZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 597.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description O-tert-butyl-N-{[(3-chlorophenyl)methoxy]carbonyl}-L-threonyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.39 _cell.angle_gamma 90 _cell.entry_id 7RVZ _cell.length_a 51.82 _cell.length_b 80.95 _cell.length_c 89.536 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RVZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -51.82 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 145 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C27 _struct_conn.ptnr2_label_comp_id 7YW _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 7YW _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.818 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C29 H45 Cl N4 O7' _chem_comp.formula_weight 597.143 _chem_comp.id 7YW _chem_comp.mon_nstd_flag . _chem_comp.name O-tert-butyl-N-{[(3-chlorophenyl)methoxy]carbonyl}-L-threonyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C6 7YW doub 1 n y C1 C2 7YW sing 2 n y C6 C5 7YW sing 3 n y CL1 C2 7YW sing 4 n n C10 C8 7YW sing 5 n n C2 C3 7YW doub 6 n y C5 C4 7YW doub 7 n y O32 C8 7YW sing 8 n n O32 C30 7YW sing 9 n n C8 C13 7YW sing 10 n n C8 C16 7YW sing 11 n n C3 C4 7YW sing 12 n y C18 C30 7YW sing 13 n n C4 C7 7YW sing 14 n n C23 C35 7YW sing 15 n n O38 C15 7YW doub 16 n n C30 C11 7YW sing 17 n n O29 C9 7YW doub 18 n n C34 C35 7YW sing 19 n n C34 C14 7YW sing 20 n n C11 C12 7YW sing 21 n n C11 N10 7YW sing 22 n n N13 C12 7YW sing 23 n n N13 C14 7YW sing 24 n n C35 C37 7YW sing 25 n n C9 N10 7YW sing 26 n n C9 O8 7YW sing 27 n n C7 O8 7YW sing 28 n n C12 O33 7YW doub 29 n n C15 C14 7YW sing 30 n n C15 N16 7YW sing 31 n n C21 C22 7YW sing 32 n n C21 C20 7YW sing 33 n n C22 N23 7YW sing 34 n n N16 C17 7YW sing 35 n n C17 C27 7YW sing 36 n n C17 C19 7YW sing 37 n n O28 C27 7YW sing 38 n n C20 C19 7YW sing 39 n n C20 C24 7YW sing 40 n n N23 C24 7YW sing 41 n n C24 O26 7YW doub 42 n n C1 H1 7YW sing 43 n n C10 H2 7YW sing 44 n n C10 H3 7YW sing 45 n n C10 H4 7YW sing 46 n n C11 H5 7YW sing 47 n n C13 H6 7YW sing 48 n n C13 H7 7YW sing 49 n n C13 H8 7YW sing 50 n n C14 H9 7YW sing 51 n n C16 H10 7YW sing 52 n n C16 H11 7YW sing 53 n n C16 H12 7YW sing 54 n n C17 H13 7YW sing 55 n n C18 H14 7YW sing 56 n n C18 H15 7YW sing 57 n n C18 H16 7YW sing 58 n n C19 H17 7YW sing 59 n n C19 H18 7YW sing 60 n n C20 H19 7YW sing 61 n n C21 H20 7YW sing 62 n n C21 H21 7YW sing 63 n n C22 H22 7YW sing 64 n n C22 H23 7YW sing 65 n n C23 H24 7YW sing 66 n n C23 H25 7YW sing 67 n n C23 H26 7YW sing 68 n n C27 H27 7YW sing 69 n n C27 H28 7YW sing 70 n n C3 H29 7YW sing 71 n n C30 H30 7YW sing 72 n n C34 H31 7YW sing 73 n n C34 H32 7YW sing 74 n n C35 H33 7YW sing 75 n n C37 H34 7YW sing 76 n n C37 H35 7YW sing 77 n n C37 H36 7YW sing 78 n n C5 H37 7YW sing 79 n n C6 H38 7YW sing 80 n n C7 H39 7YW sing 81 n n C7 H40 7YW sing 82 n n N10 H41 7YW sing 83 n n N13 H42 7YW sing 84 n n N16 H43 7YW sing 85 n n N23 H44 7YW sing 86 n n O28 H45 7YW sing 87 n n # _atom_sites.entry_id 7RVZ _atom_sites.fract_transf_matrix[1][1] 0.019298 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002162 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011239 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7YW A 1 401 401 7YW i47 . C 3 HOH A 1 501 19 HOH HOH . C 3 HOH A 2 502 13 HOH HOH . C 3 HOH A 3 503 61 HOH HOH . C 3 HOH A 4 504 16 HOH HOH . C 3 HOH A 5 505 83 HOH HOH . C 3 HOH A 6 506 30 HOH HOH . C 3 HOH A 7 507 75 HOH HOH . C 3 HOH A 8 508 47 HOH HOH . C 3 HOH A 9 509 25 HOH HOH . C 3 HOH A 10 510 81 HOH HOH . C 3 HOH A 11 511 4 HOH HOH . C 3 HOH A 12 512 95 HOH HOH . C 3 HOH A 13 513 28 HOH HOH . C 3 HOH A 14 514 54 HOH HOH . C 3 HOH A 15 515 99 HOH HOH . C 3 HOH A 16 516 26 HOH HOH . C 3 HOH A 17 517 101 HOH HOH . C 3 HOH A 18 518 2 HOH HOH . C 3 HOH A 19 519 34 HOH HOH . C 3 HOH A 20 520 32 HOH HOH . C 3 HOH A 21 521 6 HOH HOH . C 3 HOH A 22 522 73 HOH HOH . C 3 HOH A 23 523 52 HOH HOH . C 3 HOH A 24 524 45 HOH HOH . C 3 HOH A 25 525 20 HOH HOH . C 3 HOH A 26 526 39 HOH HOH . C 3 HOH A 27 527 8 HOH HOH . C 3 HOH A 28 528 64 HOH HOH . C 3 HOH A 29 529 46 HOH HOH . C 3 HOH A 30 530 66 HOH HOH . C 3 HOH A 31 531 96 HOH HOH . C 3 HOH A 32 532 58 HOH HOH . C 3 HOH A 33 533 49 HOH HOH . C 3 HOH A 34 534 103 HOH HOH . C 3 HOH A 35 535 87 HOH HOH . C 3 HOH A 36 536 21 HOH HOH . C 3 HOH A 37 537 17 HOH HOH . C 3 HOH A 38 538 7 HOH HOH . C 3 HOH A 39 539 1 HOH HOH . C 3 HOH A 40 540 37 HOH HOH . C 3 HOH A 41 541 12 HOH HOH . C 3 HOH A 42 542 59 HOH HOH . C 3 HOH A 43 543 56 HOH HOH . C 3 HOH A 44 544 36 HOH HOH . C 3 HOH A 45 545 85 HOH HOH . C 3 HOH A 46 546 9 HOH HOH . C 3 HOH A 47 547 14 HOH HOH . C 3 HOH A 48 548 70 HOH HOH . C 3 HOH A 49 549 57 HOH HOH . C 3 HOH A 50 550 3 HOH HOH . C 3 HOH A 51 551 48 HOH HOH . C 3 HOH A 52 552 42 HOH HOH . C 3 HOH A 53 553 100 HOH HOH . C 3 HOH A 54 554 72 HOH HOH . C 3 HOH A 55 555 60 HOH HOH . C 3 HOH A 56 556 77 HOH HOH . C 3 HOH A 57 557 33 HOH HOH . C 3 HOH A 58 558 97 HOH HOH . C 3 HOH A 59 559 18 HOH HOH . C 3 HOH A 60 560 24 HOH HOH . C 3 HOH A 61 561 71 HOH HOH . C 3 HOH A 62 562 84 HOH HOH . C 3 HOH A 63 563 69 HOH HOH . C 3 HOH A 64 564 10 HOH HOH . C 3 HOH A 65 565 44 HOH HOH . C 3 HOH A 66 566 15 HOH HOH . C 3 HOH A 67 567 41 HOH HOH . C 3 HOH A 68 568 74 HOH HOH . C 3 HOH A 69 569 68 HOH HOH . C 3 HOH A 70 570 5 HOH HOH . C 3 HOH A 71 571 76 HOH HOH . C 3 HOH A 72 572 67 HOH HOH . C 3 HOH A 73 573 35 HOH HOH . C 3 HOH A 74 574 104 HOH HOH . C 3 HOH A 75 575 29 HOH HOH . C 3 HOH A 76 576 23 HOH HOH . C 3 HOH A 77 577 51 HOH HOH . C 3 HOH A 78 578 11 HOH HOH . C 3 HOH A 79 579 38 HOH HOH . C 3 HOH A 80 580 88 HOH HOH . C 3 HOH A 81 581 31 HOH HOH . C 3 HOH A 82 582 43 HOH HOH . C 3 HOH A 83 583 22 HOH HOH . C 3 HOH A 84 584 55 HOH HOH . C 3 HOH A 85 585 79 HOH HOH . C 3 HOH A 86 586 62 HOH HOH . C 3 HOH A 87 587 40 HOH HOH . C 3 HOH A 88 588 80 HOH HOH . C 3 HOH A 89 589 94 HOH HOH . C 3 HOH A 90 590 91 HOH HOH . C 3 HOH A 91 591 63 HOH HOH . C 3 HOH A 92 592 86 HOH HOH . C 3 HOH A 93 593 50 HOH HOH . C 3 HOH A 94 594 65 HOH HOH . C 3 HOH A 95 595 89 HOH HOH . C 3 HOH A 96 596 98 HOH HOH . C 3 HOH A 97 597 82 HOH HOH . C 3 HOH A 98 598 102 HOH HOH . C 3 HOH A 99 599 93 HOH HOH . C 3 HOH A 100 600 90 HOH HOH . C 3 HOH A 101 601 92 HOH HOH . C 3 HOH A 102 602 53 HOH HOH . C 3 HOH A 103 603 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7YW . . . B 2 -5.913 -22.513 -21.745 1 69.22 ? C1 7YW 401 A 1 HETATM 2 C C10 7YW . . . B 2 -10.663 -21.107 -20.735 1 55.36 ? C10 7YW 401 A 1 HETATM 3 C C11 7YW . . . B 2 -9.235 -17.177 -18.626 1 49.16 ? C11 7YW 401 A 1 HETATM 4 C C12 7YW . . . B 2 -9.511 -15.864 -17.961 1 46.52 ? C12 7YW 401 A 1 HETATM 5 C C13 7YW . . . B 2 -12.368 -20.165 -19.176 1 51.14 ? C13 7YW 401 A 1 HETATM 6 C C14 7YW . . . B 2 -9.155 -13.46 -17.908 1 44.62 ? C14 7YW 401 A 1 HETATM 7 C C15 7YW . . . B 2 -10.593 -13.014 -17.949 1 42.73 ? C15 7YW 401 A 1 HETATM 8 C C16 7YW . . . B 2 -10.095 -20.764 -18.335 1 51.81 ? C16 7YW 401 A 1 HETATM 9 C C17 7YW . . . B 2 -12.486 -12.014 -16.772 1 39.18 ? C17 7YW 401 A 1 HETATM 10 C C18 7YW . . . B 2 -11.615 -16.87 -19.446 1 47.92 ? C18 7YW 401 A 1 HETATM 11 C C19 7YW . . . B 2 -13.345 -12.819 -15.785 1 36.53 ? C19 7YW 401 A 1 HETATM 12 C C2 7YW . . . B 2 -6.721 -22.798 -20.646 1 67.45 ? C2 7YW 401 A 1 HETATM 13 C C20 7YW . . . B 2 -13.505 -14.276 -16.224 1 34.96 ? C20 7YW 401 A 1 HETATM 14 C C21 7YW . . . B 2 -14.3 -14.372 -17.522 1 40.78 ? C21 7YW 401 A 1 HETATM 15 C C22 7YW . . . B 2 -15.232 -15.569 -17.347 1 41.43 ? C22 7YW 401 A 1 HETATM 16 C C23 7YW . . . B 2 -5.88 -11.915 -19.34 1 50.04 ? C23 7YW 401 A 1 HETATM 17 C C24 7YW . . . B 2 -14.325 -15.101 -15.267 1 35.91 ? C24 7YW 401 A 1 HETATM 18 C C27 7YW . . . B 2 -12.472 -10.522 -16.424 1 39.15 ? C27 7YW 401 A 1 HETATM 19 C C3 7YW . . . B 2 -6.593 -22.08 -19.457 1 64.71 ? C3 7YW 401 A 1 HETATM 20 C C30 7YW . . . B 2 -10.579 -17.863 -18.906 1 49.3 ? C30 7YW 401 A 1 HETATM 21 C C34 7YW . . . B 2 -8.273 -12.452 -18.659 1 46.21 ? C34 7YW 401 A 1 HETATM 22 C C35 7YW . . . B 2 -6.789 -12.798 -18.484 1 48.46 ? C35 7YW 401 A 1 HETATM 23 C C37 7YW . . . B 2 -6.376 -12.75 -17.007 1 44.23 ? C37 7YW 401 A 1 HETATM 24 C C4 7YW . . . B 2 -5.663 -21.055 -19.36 1 65.68 ? C4 7YW 401 A 1 HETATM 25 C C5 7YW . . . B 2 -4.856 -20.781 -20.467 1 66.73 ? C5 7YW 401 A 1 HETATM 26 C C6 7YW . . . B 2 -4.97 -21.497 -21.66 1 68.8 ? C6 7YW 401 A 1 HETATM 27 C C7 7YW . . . B 2 -5.501 -20.276 -18.062 1 61.83 ? C7 7YW 401 A 1 HETATM 28 C C8 7YW . . . B 2 -10.881 -20.208 -19.519 1 51.81 ? C8 7YW 401 A 1 HETATM 29 C C9 7YW . . . B 2 -7.17 -18.457 -18.101 1 57.94 ? C9 7YW 401 A 1 HETATM 30 N N10 7YW . . . B 2 -8.382 -17.99 -17.763 1 50.16 ? N10 7YW 401 A 1 HETATM 31 N N13 7YW . . . B 2 -8.997 -14.769 -18.519 1 46.29 ? N13 7YW 401 A 1 HETATM 32 N N16 7YW . . . B 2 -11.11 -12.509 -16.825 1 40.01 ? N16 7YW 401 A 1 HETATM 33 N N23 7YW . . . B 2 -15.237 -15.828 -15.916 1 36.55 ? N23 7YW 401 A 1 HETATM 34 O O26 7YW . . . B 2 -14.135 -15.106 -14.064 1 33.54 ? O26 7YW 401 A 1 HETATM 35 O O28 7YW . . . B 2 -13.781 -9.973 -16.669 1 42.32 ? O28 7YW 401 A 1 HETATM 36 O O29 7YW . . . B 2 -6.392 -17.911 -18.876 1 60.77 ? O29 7YW 401 A 1 HETATM 37 O O32 7YW . . . B 2 -10.403 -18.902 -19.871 1 52.72 ? O32 7YW 401 A 1 HETATM 38 O O33 7YW . . . B 2 -10.19 -15.838 -16.95 1 39.68 ? O33 7YW 401 A 1 HETATM 39 O O38 7YW . . . B 2 -11.235 -13.12 -18.99 1 42.54 ? O38 7YW 401 A 1 HETATM 40 O O8 7YW . . . B 2 -6.713 -19.72 -17.535 1 60.57 ? O8 7YW 401 A 1 HETATM 41 CL CL1 7YW . . . B 2 -7.946 -24.116 -20.761 1 86.22 ? CL1 7YW 401 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 41 #