data_7RY8
#
_model_server_result.job_id            -Y8h4OeT93wwv3MlKly6Ng 
_model_server_result.datetime_utc      '2024-11-30 09:08:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ry8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":603}' 
#
_entry.id    7RY8 
#
_exptl.entry_id    7RY8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.509 
_cell.angle_gamma         90 
_cell.entry_id            7RY8 
_cell.length_a            77.79 
_cell.length_b            66.863 
_cell.length_c            80.878 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RY8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N8 VOR . A VOR 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                BGC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     beta-D-glucose;D-glucose;glucose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C3 BGC sing 107 n n 
C2 C1 BGC sing 108 n n 
C2 O2 BGC sing 109 n n 
C2 H2 BGC sing 110 n n 
C3 C4 BGC sing 111 n n 
C3 O3 BGC sing 112 n n 
C3 H3 BGC sing 113 n n 
C4 C5 BGC sing 114 n n 
C4 O4 BGC sing 115 n n 
C4 H4 BGC sing 116 n n 
C5 C6 BGC sing 117 n n 
C5 O5 BGC sing 118 n n 
C5 H5 BGC sing 119 n n 
C6 O6 BGC sing 120 n n 
C6 H61 BGC sing 121 n n 
C6 H62 BGC sing 122 n n 
C1 O1 BGC sing 123 n n 
C1 O5 BGC sing 124 n n 
C1 H1 BGC sing 125 n n 
O1 HO1 BGC sing 126 n n 
O2 HO2 BGC sing 127 n n 
O3 HO3 BGC sing 128 n n 
O4 HO4 BGC sing 129 n n 
O6 HO6 BGC sing 130 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
BGC b-D-glucopyranose 'COMMON NAME' GMML 1 
BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7RY8 
_atom_sites.fract_transf_matrix[1][1]    0.012855 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001923 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014956 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012502 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 601 HEM HEM . 
C 3 VOR A 1 602 2 VOR VOR . 
D 4 BGC A 1 603 1 BGC BGC . 
E 5 1PE A 1 604 604 1PE 1PE . 
F 6 HOH A 1 701 55 HOH HOH . 
F 6 HOH A 2 702 258 HOH HOH . 
F 6 HOH A 3 703 98 HOH HOH . 
F 6 HOH A 4 704 6 HOH HOH . 
F 6 HOH A 5 705 189 HOH HOH . 
F 6 HOH A 6 706 67 HOH HOH . 
F 6 HOH A 7 707 29 HOH HOH . 
F 6 HOH A 8 708 284 HOH HOH . 
F 6 HOH A 9 709 27 HOH HOH . 
F 6 HOH A 10 710 118 HOH HOH . 
F 6 HOH A 11 711 203 HOH HOH . 
F 6 HOH A 12 712 281 HOH HOH . 
F 6 HOH A 13 713 185 HOH HOH . 
F 6 HOH A 14 714 12 HOH HOH . 
F 6 HOH A 15 715 20 HOH HOH . 
F 6 HOH A 16 716 270 HOH HOH . 
F 6 HOH A 17 717 21 HOH HOH . 
F 6 HOH A 18 718 196 HOH HOH . 
F 6 HOH A 19 719 60 HOH HOH . 
F 6 HOH A 20 720 85 HOH HOH . 
F 6 HOH A 21 721 257 HOH HOH . 
F 6 HOH A 22 722 17 HOH HOH . 
F 6 HOH A 23 723 245 HOH HOH . 
F 6 HOH A 24 724 309 HOH HOH . 
F 6 HOH A 25 725 46 HOH HOH . 
F 6 HOH A 26 726 49 HOH HOH . 
F 6 HOH A 27 727 33 HOH HOH . 
F 6 HOH A 28 728 86 HOH HOH . 
F 6 HOH A 29 729 288 HOH HOH . 
F 6 HOH A 30 730 51 HOH HOH . 
F 6 HOH A 31 731 232 HOH HOH . 
F 6 HOH A 32 732 10 HOH HOH . 
F 6 HOH A 33 733 255 HOH HOH . 
F 6 HOH A 34 734 30 HOH HOH . 
F 6 HOH A 35 735 87 HOH HOH . 
F 6 HOH A 36 736 38 HOH HOH . 
F 6 HOH A 37 737 266 HOH HOH . 
F 6 HOH A 38 738 173 HOH HOH . 
F 6 HOH A 39 739 233 HOH HOH . 
F 6 HOH A 40 740 254 HOH HOH . 
F 6 HOH A 41 741 32 HOH HOH . 
F 6 HOH A 42 742 18 HOH HOH . 
F 6 HOH A 43 743 22 HOH HOH . 
F 6 HOH A 44 744 177 HOH HOH . 
F 6 HOH A 45 745 92 HOH HOH . 
F 6 HOH A 46 746 201 HOH HOH . 
F 6 HOH A 47 747 31 HOH HOH . 
F 6 HOH A 48 748 2 HOH HOH . 
F 6 HOH A 49 749 217 HOH HOH . 
F 6 HOH A 50 750 13 HOH HOH . 
F 6 HOH A 51 751 301 HOH HOH . 
F 6 HOH A 52 752 178 HOH HOH . 
F 6 HOH A 53 753 25 HOH HOH . 
F 6 HOH A 54 754 134 HOH HOH . 
F 6 HOH A 55 755 290 HOH HOH . 
F 6 HOH A 56 756 11 HOH HOH . 
F 6 HOH A 57 757 195 HOH HOH . 
F 6 HOH A 58 758 39 HOH HOH . 
F 6 HOH A 59 759 218 HOH HOH . 
F 6 HOH A 60 760 84 HOH HOH . 
F 6 HOH A 61 761 19 HOH HOH . 
F 6 HOH A 62 762 316 HOH HOH . 
F 6 HOH A 63 763 78 HOH HOH . 
F 6 HOH A 64 764 225 HOH HOH . 
F 6 HOH A 65 765 53 HOH HOH . 
F 6 HOH A 66 766 210 HOH HOH . 
F 6 HOH A 67 767 63 HOH HOH . 
F 6 HOH A 68 768 229 HOH HOH . 
F 6 HOH A 69 769 58 HOH HOH . 
F 6 HOH A 70 770 181 HOH HOH . 
F 6 HOH A 71 771 7 HOH HOH . 
F 6 HOH A 72 772 238 HOH HOH . 
F 6 HOH A 73 773 24 HOH HOH . 
F 6 HOH A 74 774 298 HOH HOH . 
F 6 HOH A 75 775 26 HOH HOH . 
F 6 HOH A 76 776 15 HOH HOH . 
F 6 HOH A 77 777 70 HOH HOH . 
F 6 HOH A 78 778 16 HOH HOH . 
F 6 HOH A 79 779 28 HOH HOH . 
F 6 HOH A 80 780 234 HOH HOH . 
F 6 HOH A 81 781 100 HOH HOH . 
F 6 HOH A 82 782 34 HOH HOH . 
F 6 HOH A 83 783 9 HOH HOH . 
F 6 HOH A 84 784 35 HOH HOH . 
F 6 HOH A 85 785 283 HOH HOH . 
F 6 HOH A 86 786 79 HOH HOH . 
F 6 HOH A 87 787 256 HOH HOH . 
F 6 HOH A 88 788 57 HOH HOH . 
F 6 HOH A 89 789 8 HOH HOH . 
F 6 HOH A 90 790 209 HOH HOH . 
F 6 HOH A 91 791 224 HOH HOH . 
F 6 HOH A 92 792 223 HOH HOH . 
F 6 HOH A 93 793 253 HOH HOH . 
F 6 HOH A 94 794 23 HOH HOH . 
F 6 HOH A 95 795 219 HOH HOH . 
F 6 HOH A 96 796 107 HOH HOH . 
F 6 HOH A 97 797 222 HOH HOH . 
F 6 HOH A 98 798 36 HOH HOH . 
F 6 HOH A 99 799 272 HOH HOH . 
F 6 HOH A 100 800 174 HOH HOH . 
F 6 HOH A 101 801 129 HOH HOH . 
F 6 HOH A 102 802 156 HOH HOH . 
F 6 HOH A 103 803 236 HOH HOH . 
F 6 HOH A 104 804 278 HOH HOH . 
F 6 HOH A 105 805 37 HOH HOH . 
F 6 HOH A 106 806 263 HOH HOH . 
F 6 HOH A 107 807 48 HOH HOH . 
F 6 HOH A 108 808 246 HOH HOH . 
F 6 HOH A 109 809 286 HOH HOH . 
F 6 HOH A 110 810 128 HOH HOH . 
F 6 HOH A 111 811 274 HOH HOH . 
F 6 HOH A 112 812 317 HOH HOH . 
F 6 HOH A 113 813 133 HOH HOH . 
F 6 HOH A 114 814 297 HOH HOH . 
F 6 HOH A 115 815 261 HOH HOH . 
F 6 HOH A 116 816 212 HOH HOH . 
F 6 HOH A 117 817 108 HOH HOH . 
F 6 HOH A 118 818 239 HOH HOH . 
F 6 HOH A 119 819 205 HOH HOH . 
F 6 HOH A 120 820 303 HOH HOH . 
F 6 HOH A 121 821 264 HOH HOH . 
F 6 HOH A 122 822 269 HOH HOH . 
F 6 HOH A 123 823 271 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 BGC . . . D 4 43.54 15.082 9.163 1 62.08 ? C2 BGC 603 A 1 
HETATM 2 C C3 BGC . . . D 4 43.929 16.248 10.101 1 62.26 ? C3 BGC 603 A 1 
HETATM 3 C C4 BGC . . . D 4 44.971 15.855 11.149 1 64.49 ? C4 BGC 603 A 1 
HETATM 4 C C5 BGC . . . D 4 46.074 15.041 10.493 1 69.53 ? C5 BGC 603 A 1 
HETATM 5 C C6 BGC . . . D 4 47.197 14.657 11.425 1 68 ? C6 BGC 603 A 1 
HETATM 6 C C1 BGC . . . D 4 44.712 14.165 8.788 1 66.69 ? C1 BGC 603 A 1 
HETATM 7 O O1 BGC . . . D 4 44.226 12.999 8.199 1 66.57 ? O1 BGC 603 A 1 
HETATM 8 O O2 BGC . . . D 4 43.002 15.644 7.972 1 57.06 ? O2 BGC 603 A 1 
HETATM 9 O O3 BGC . . . D 4 42.754 16.776 10.723 1 56.97 ? O3 BGC 603 A 1 
HETATM 10 O O4 BGC . . . D 4 45.56 17.026 11.709 1 69.55 ? O4 BGC 603 A 1 
HETATM 11 O O5 BGC . . . D 4 45.506 13.846 9.948 1 74.48 ? O5 BGC 603 A 1 
HETATM 12 O O6 BGC . . . D 4 48.173 15.695 11.453 1 74 ? O6 BGC 603 A 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           12 
#