data_7RY9
#
_model_server_result.job_id            UmVnBiNWOPnT8at6QQ8kRA 
_model_server_result.datetime_utc      '2024-11-26 01:15:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ry9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":603}' 
#
_entry.id    7RY9 
#
_exptl.entry_id    7RY9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              194.226 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TETRAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.14 
_cell.angle_gamma         90 
_cell.entry_id            7RY9 
_cell.length_a            76.79 
_cell.length_b            66.31 
_cell.length_c            80.73 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7RY9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N8 VOR . A VOR 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
#
_chem_comp.formula           'C8 H18 O5' 
_chem_comp.formula_weight    194.226 
_chem_comp.id                PG4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TETRAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 PG4 sing 319 n n 
O1 HO1 PG4 sing 320 n n 
C1 C2 PG4 sing 321 n n 
C1 H11 PG4 sing 322 n n 
C1 H12 PG4 sing 323 n n 
C2 O2 PG4 sing 324 n n 
C2 H21 PG4 sing 325 n n 
C2 H22 PG4 sing 326 n n 
O2 C3 PG4 sing 327 n n 
C3 C4 PG4 sing 328 n n 
C3 H31 PG4 sing 329 n n 
C3 H32 PG4 sing 330 n n 
C4 O3 PG4 sing 331 n n 
C4 H41 PG4 sing 332 n n 
C4 H42 PG4 sing 333 n n 
O3 C5 PG4 sing 334 n n 
C5 C6 PG4 sing 335 n n 
C5 H51 PG4 sing 336 n n 
C5 H52 PG4 sing 337 n n 
C6 O4 PG4 sing 338 n n 
C6 H61 PG4 sing 339 n n 
C6 H62 PG4 sing 340 n n 
O4 C7 PG4 sing 341 n n 
C7 C8 PG4 sing 342 n n 
C7 H71 PG4 sing 343 n n 
C7 H72 PG4 sing 344 n n 
C8 O5 PG4 sing 345 n n 
C8 H81 PG4 sing 346 n n 
C8 H82 PG4 sing 347 n n 
O5 HO5 PG4 sing 348 n n 
#
_atom_sites.entry_id                     7RY9 
_atom_sites.fract_transf_matrix[1][1]    0.013023 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001863 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015081 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012513 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 601 HEM HEM . 
C 3 VOR A 1 602 602 VOR VOR . 
D 4 PG4 A 1 603 1 PG4 PG4 . 
E 5 HOH A 1 701 6 HOH HOH . 
E 5 HOH A 2 702 4 HOH HOH . 
E 5 HOH A 3 703 7 HOH HOH . 
E 5 HOH A 4 704 2 HOH HOH . 
E 5 HOH A 5 705 10 HOH HOH . 
E 5 HOH A 6 706 8 HOH HOH . 
E 5 HOH A 7 707 9 HOH HOH . 
E 5 HOH A 8 708 51 HOH HOH . 
E 5 HOH A 9 709 43 HOH HOH . 
E 5 HOH A 10 710 39 HOH HOH . 
E 5 HOH A 11 711 49 HOH HOH . 
E 5 HOH A 12 712 20 HOH HOH . 
E 5 HOH A 13 713 60 HOH HOH . 
E 5 HOH A 14 714 47 HOH HOH . 
E 5 HOH A 15 715 33 HOH HOH . 
E 5 HOH A 16 716 35 HOH HOH . 
E 5 HOH A 17 717 102 HOH HOH . 
E 5 HOH A 18 718 21 HOH HOH . 
E 5 HOH A 19 719 37 HOH HOH . 
E 5 HOH A 20 720 40 HOH HOH . 
E 5 HOH A 21 721 93 HOH HOH . 
E 5 HOH A 22 722 32 HOH HOH . 
E 5 HOH A 23 723 57 HOH HOH . 
E 5 HOH A 24 724 13 HOH HOH . 
E 5 HOH A 25 725 56 HOH HOH . 
E 5 HOH A 26 726 55 HOH HOH . 
E 5 HOH A 27 727 5 HOH HOH . 
E 5 HOH A 28 728 18 HOH HOH . 
E 5 HOH A 29 729 25 HOH HOH . 
E 5 HOH A 30 730 38 HOH HOH . 
E 5 HOH A 31 731 27 HOH HOH . 
E 5 HOH A 32 732 44 HOH HOH . 
E 5 HOH A 33 733 19 HOH HOH . 
E 5 HOH A 34 734 45 HOH HOH . 
E 5 HOH A 35 735 48 HOH HOH . 
E 5 HOH A 36 736 17 HOH HOH . 
E 5 HOH A 37 737 71 HOH HOH . 
E 5 HOH A 38 738 65 HOH HOH . 
E 5 HOH A 39 739 16 HOH HOH . 
E 5 HOH A 40 740 95 HOH HOH . 
E 5 HOH A 41 741 78 HOH HOH . 
E 5 HOH A 42 742 68 HOH HOH . 
E 5 HOH A 43 743 59 HOH HOH . 
E 5 HOH A 44 744 3 HOH HOH . 
E 5 HOH A 45 745 54 HOH HOH . 
E 5 HOH A 46 746 22 HOH HOH . 
E 5 HOH A 47 747 36 HOH HOH . 
E 5 HOH A 48 748 87 HOH HOH . 
E 5 HOH A 49 749 99 HOH HOH . 
E 5 HOH A 50 750 104 HOH HOH . 
E 5 HOH A 51 751 14 HOH HOH . 
E 5 HOH A 52 752 24 HOH HOH . 
E 5 HOH A 53 753 64 HOH HOH . 
E 5 HOH A 54 754 101 HOH HOH . 
E 5 HOH A 55 755 46 HOH HOH . 
E 5 HOH A 56 756 103 HOH HOH . 
E 5 HOH A 57 757 31 HOH HOH . 
E 5 HOH A 58 758 62 HOH HOH . 
E 5 HOH A 59 759 50 HOH HOH . 
E 5 HOH A 60 760 41 HOH HOH . 
E 5 HOH A 61 761 63 HOH HOH . 
E 5 HOH A 62 762 91 HOH HOH . 
E 5 HOH A 63 763 73 HOH HOH . 
E 5 HOH A 64 764 66 HOH HOH . 
E 5 HOH A 65 765 1 HOH HOH . 
E 5 HOH A 66 766 70 HOH HOH . 
E 5 HOH A 67 767 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PG4 . . . D 4 29.943 30.683 -2.106 1 47.27 ? O1 PG4 603 A 1 
HETATM 2 C C1 PG4 . . . D 4 28.83 29.81 -1.898 1 47.21 ? C1 PG4 603 A 1 
HETATM 3 C C2 PG4 . . . D 4 28.642 28.753 -2.962 1 43.29 ? C2 PG4 603 A 1 
HETATM 4 O O2 PG4 . . . D 4 29.568 27.663 -2.871 1 49.75 ? O2 PG4 603 A 1 
HETATM 5 C C3 PG4 . . . D 4 29.477 26.768 -3.975 1 46.35 ? C3 PG4 603 A 1 
HETATM 6 C C4 PG4 . . . D 4 30.557 25.72 -3.972 1 40.44 ? C4 PG4 603 A 1 
HETATM 7 O O3 PG4 . . . D 4 31.778 26.208 -3.396 1 51.38 ? O3 PG4 603 A 1 
HETATM 8 C C5 PG4 . . . D 4 32.806 25.241 -3.573 1 46.1 ? C5 PG4 603 A 1 
HETATM 9 C C6 PG4 . . . D 4 34.114 25.613 -2.935 1 43.69 ? C6 PG4 603 A 1 
HETATM 10 O O4 PG4 . . . D 4 34.362 27.028 -2.889 1 55.2 ? O4 PG4 603 A 1 
HETATM 11 C C7 PG4 . . . D 4 35.086 27.33 -1.695 1 43.65 ? C7 PG4 603 A 1 
HETATM 12 C C8 PG4 . . . D 4 35.53 28.764 -1.592 1 44.01 ? C8 PG4 603 A 1 
HETATM 13 O O5 PG4 . . . D 4 34.601 29.592 -0.89 1 44.92 ? O5 PG4 603 A 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           13 
#