data_7RZK # _model_server_result.job_id sT1JgcvPq-QJQOeUATTsKA _model_server_result.datetime_utc '2024-11-15 21:40:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7rzk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 7RZK # _exptl.entry_id 7RZK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7RZK _cell.length_a 43.005 _cell.length_b 57.521 _cell.length_c 81.248 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RZK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 58 A ASP 38 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc2 A OD2 ASP 58 A ASP 38 1_555 D MG MG . A MG 303 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.192 ? metalc ? metalc3 A OD2 ASP 58 A ASP 38 1_555 E CO CO . A CO 304 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.073 ? metalc ? metalc4 A OD1 ASP 60 A ASP 40 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc5 A OD2 ASP 60 A ASP 40 1_555 D MG MG . A MG 303 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.99 ? metalc ? metalc6 A OD2 ASP 60 A ASP 40 1_555 E CO CO . A CO 304 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.138 ? metalc ? metalc7 A OE1 GLU 77 A GLU 57 1_555 H CO CO . A CO 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc8 A OE2 GLU 123 A GLU 103 1_555 F CO CO . A CO 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc9 B O2B ADP . A ADP 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc10 B O1A ADP . A ADP 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc11 B O2B ADP . A ADP 301 1_555 D MG MG . A MG 303 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.365 ? metalc ? metalc12 B O2B ADP . A ADP 301 1_555 E CO CO . A CO 304 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.199 ? metalc ? metalc13 C MG MG . A MG 302 1_555 K O HOH . A HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc14 D MG MG . A MG 303 1_555 K O HOH . A HOH 420 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc15 D MG MG . A MG 303 1_555 K O HOH . A HOH 481 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc16 D MG MG . A MG 303 1_555 K O HOH . A HOH 491 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc17 E CO CO . A CO 304 1_555 K O HOH . A HOH 420 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc18 E CO CO . A CO 304 1_555 K O HOH . A HOH 481 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc19 E CO CO . A CO 304 1_555 K O HOH . A HOH 491 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc20 F CO CO . A CO 305 1_555 K O HOH . A HOH 469 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc21 F CO CO . A CO 305 1_555 K O HOH . A HOH 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc22 F CO CO . A CO 305 1_555 K O HOH . A HOH 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc23 F CO CO . A CO 305 1_555 K O HOH . A HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc24 G CO CO . A CO 306 1_555 K O HOH . A HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc25 G CO CO . A CO 306 1_555 K O HOH . A HOH 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc26 I CO CO . A CO 308 1_555 K O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? metalc ? metalc27 I CO CO . A CO 308 1_555 K O HOH . A HOH 421 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc28 I CO CO . A CO 308 1_555 K O HOH . A HOH 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc29 I CO CO . A CO 308 1_555 K O HOH . A HOH 573 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc30 J CO CO . A CO 309 1_555 K O HOH . A HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc31 J CO CO . A CO 309 1_555 K O HOH . A HOH 514 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc32 J CO CO . A CO 309 1_555 K O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7RZK _atom_sites.fract_transf_matrix[1][1] 0.023253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012308 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 301 301 ADP ADP . C 3 MG A 1 302 1 MG MG . D 3 MG A 1 303 2 MG MG . E 4 CO A 1 304 2 CO CO . F 4 CO A 1 305 3 CO CO . G 4 CO A 1 306 4 CO CO . H 4 CO A 1 307 5 CO CO . I 4 CO A 1 308 6 CO CO . J 4 CO A 1 309 1 CO CO . K 5 HOH A 1 401 166 HOH HOH . K 5 HOH A 2 402 179 HOH HOH . K 5 HOH A 3 403 181 HOH HOH . K 5 HOH A 4 404 87 HOH HOH . K 5 HOH A 5 405 122 HOH HOH . K 5 HOH A 6 406 85 HOH HOH . K 5 HOH A 7 407 142 HOH HOH . K 5 HOH A 8 408 183 HOH HOH . K 5 HOH A 9 409 153 HOH HOH . K 5 HOH A 10 410 161 HOH HOH . K 5 HOH A 11 411 77 HOH HOH . K 5 HOH A 12 412 188 HOH HOH . K 5 HOH A 13 413 60 HOH HOH . K 5 HOH A 14 414 133 HOH HOH . K 5 HOH A 15 415 54 HOH HOH . K 5 HOH A 16 416 42 HOH HOH . K 5 HOH A 17 417 109 HOH HOH . K 5 HOH A 18 418 71 HOH HOH . K 5 HOH A 19 419 32 HOH HOH . K 5 HOH A 20 420 64 HOH HOH . K 5 HOH A 21 421 134 HOH HOH . K 5 HOH A 22 422 37 HOH HOH . K 5 HOH A 23 423 47 HOH HOH . K 5 HOH A 24 424 12 HOH HOH . K 5 HOH A 25 425 41 HOH HOH . K 5 HOH A 26 426 61 HOH HOH . K 5 HOH A 27 427 24 HOH HOH . K 5 HOH A 28 428 19 HOH HOH . K 5 HOH A 29 429 57 HOH HOH . K 5 HOH A 30 430 35 HOH HOH . K 5 HOH A 31 431 14 HOH HOH . K 5 HOH A 32 432 6 HOH HOH . K 5 HOH A 33 433 27 HOH HOH . K 5 HOH A 34 434 1 HOH HOH . K 5 HOH A 35 435 34 HOH HOH . K 5 HOH A 36 436 139 HOH HOH . K 5 HOH A 37 437 18 HOH HOH . K 5 HOH A 38 438 8 HOH HOH . K 5 HOH A 39 439 69 HOH HOH . K 5 HOH A 40 440 15 HOH HOH . K 5 HOH A 41 441 38 HOH HOH . K 5 HOH A 42 442 7 HOH HOH . K 5 HOH A 43 443 43 HOH HOH . K 5 HOH A 44 444 10 HOH HOH . K 5 HOH A 45 445 74 HOH HOH . K 5 HOH A 46 446 108 HOH HOH . K 5 HOH A 47 447 131 HOH HOH . K 5 HOH A 48 448 49 HOH HOH . K 5 HOH A 49 449 31 HOH HOH . K 5 HOH A 50 450 33 HOH HOH . K 5 HOH A 51 451 16 HOH HOH . K 5 HOH A 52 452 20 HOH HOH . K 5 HOH A 53 453 58 HOH HOH . K 5 HOH A 54 454 11 HOH HOH . K 5 HOH A 55 455 78 HOH HOH . K 5 HOH A 56 456 4 HOH HOH . K 5 HOH A 57 457 67 HOH HOH . K 5 HOH A 58 458 26 HOH HOH . K 5 HOH A 59 459 17 HOH HOH . K 5 HOH A 60 460 9 HOH HOH . K 5 HOH A 61 461 51 HOH HOH . K 5 HOH A 62 462 95 HOH HOH . K 5 HOH A 63 463 144 HOH HOH . K 5 HOH A 64 464 25 HOH HOH . K 5 HOH A 65 465 52 HOH HOH . K 5 HOH A 66 466 88 HOH HOH . K 5 HOH A 67 467 28 HOH HOH . K 5 HOH A 68 468 155 HOH HOH . K 5 HOH A 69 469 65 HOH HOH . K 5 HOH A 70 470 70 HOH HOH . K 5 HOH A 71 471 53 HOH HOH . K 5 HOH A 72 472 40 HOH HOH . K 5 HOH A 73 473 21 HOH HOH . K 5 HOH A 74 474 90 HOH HOH . K 5 HOH A 75 475 112 HOH HOH . K 5 HOH A 76 476 165 HOH HOH . K 5 HOH A 77 477 103 HOH HOH . K 5 HOH A 78 478 75 HOH HOH . K 5 HOH A 79 479 178 HOH HOH . K 5 HOH A 80 480 45 HOH HOH . K 5 HOH A 81 481 63 HOH HOH . K 5 HOH A 82 482 79 HOH HOH . K 5 HOH A 83 483 98 HOH HOH . K 5 HOH A 84 484 50 HOH HOH . K 5 HOH A 85 485 173 HOH HOH . K 5 HOH A 86 486 172 HOH HOH . K 5 HOH A 87 487 5 HOH HOH . K 5 HOH A 88 488 55 HOH HOH . K 5 HOH A 89 489 105 HOH HOH . K 5 HOH A 90 490 100 HOH HOH . K 5 HOH A 91 491 62 HOH HOH . K 5 HOH A 92 492 167 HOH HOH . K 5 HOH A 93 493 30 HOH HOH . K 5 HOH A 94 494 39 HOH HOH . K 5 HOH A 95 495 68 HOH HOH . K 5 HOH A 96 496 73 HOH HOH . K 5 HOH A 97 497 147 HOH HOH . K 5 HOH A 98 498 96 HOH HOH . K 5 HOH A 99 499 3 HOH HOH . K 5 HOH A 100 500 93 HOH HOH . K 5 HOH A 101 501 86 HOH HOH . K 5 HOH A 102 502 23 HOH HOH . K 5 HOH A 103 503 72 HOH HOH . K 5 HOH A 104 504 44 HOH HOH . K 5 HOH A 105 505 66 HOH HOH . K 5 HOH A 106 506 102 HOH HOH . K 5 HOH A 107 507 132 HOH HOH . K 5 HOH A 108 508 163 HOH HOH . K 5 HOH A 109 509 13 HOH HOH . K 5 HOH A 110 510 101 HOH HOH . K 5 HOH A 111 511 59 HOH HOH . K 5 HOH A 112 512 2 HOH HOH . K 5 HOH A 113 513 110 HOH HOH . K 5 HOH A 114 514 182 HOH HOH . K 5 HOH A 115 515 123 HOH HOH . K 5 HOH A 116 516 190 HOH HOH . K 5 HOH A 117 517 125 HOH HOH . K 5 HOH A 118 518 36 HOH HOH . K 5 HOH A 119 519 81 HOH HOH . K 5 HOH A 120 520 158 HOH HOH . K 5 HOH A 121 521 148 HOH HOH . K 5 HOH A 122 522 83 HOH HOH . K 5 HOH A 123 523 127 HOH HOH . K 5 HOH A 124 524 164 HOH HOH . K 5 HOH A 125 525 169 HOH HOH . K 5 HOH A 126 526 94 HOH HOH . K 5 HOH A 127 527 130 HOH HOH . K 5 HOH A 128 528 170 HOH HOH . K 5 HOH A 129 529 140 HOH HOH . K 5 HOH A 130 530 145 HOH HOH . K 5 HOH A 131 531 129 HOH HOH . K 5 HOH A 132 532 151 HOH HOH . K 5 HOH A 133 533 113 HOH HOH . K 5 HOH A 134 534 48 HOH HOH . K 5 HOH A 135 535 154 HOH HOH . K 5 HOH A 136 536 141 HOH HOH . K 5 HOH A 137 537 138 HOH HOH . K 5 HOH A 138 538 171 HOH HOH . K 5 HOH A 139 539 143 HOH HOH . K 5 HOH A 140 540 99 HOH HOH . K 5 HOH A 141 541 124 HOH HOH . K 5 HOH A 142 542 186 HOH HOH . K 5 HOH A 143 543 89 HOH HOH . K 5 HOH A 144 544 29 HOH HOH . K 5 HOH A 145 545 135 HOH HOH . K 5 HOH A 146 546 106 HOH HOH . K 5 HOH A 147 547 180 HOH HOH . K 5 HOH A 148 548 92 HOH HOH . K 5 HOH A 149 549 187 HOH HOH . K 5 HOH A 150 550 114 HOH HOH . K 5 HOH A 151 551 82 HOH HOH . K 5 HOH A 152 552 76 HOH HOH . K 5 HOH A 153 553 80 HOH HOH . K 5 HOH A 154 554 156 HOH HOH . K 5 HOH A 155 555 149 HOH HOH . K 5 HOH A 156 556 157 HOH HOH . K 5 HOH A 157 557 104 HOH HOH . K 5 HOH A 158 558 111 HOH HOH . K 5 HOH A 159 559 126 HOH HOH . K 5 HOH A 160 560 189 HOH HOH . K 5 HOH A 161 561 185 HOH HOH . K 5 HOH A 162 562 97 HOH HOH . K 5 HOH A 163 563 84 HOH HOH . K 5 HOH A 164 564 168 HOH HOH . K 5 HOH A 165 565 184 HOH HOH . K 5 HOH A 166 566 136 HOH HOH . K 5 HOH A 167 567 146 HOH HOH . K 5 HOH A 168 568 152 HOH HOH . K 5 HOH A 169 569 128 HOH HOH . K 5 HOH A 170 570 91 HOH HOH . K 5 HOH A 171 571 162 HOH HOH . K 5 HOH A 172 572 56 HOH HOH . K 5 HOH A 173 573 137 HOH HOH . K 5 HOH A 174 574 46 HOH HOH . K 5 HOH A 175 575 150 HOH HOH . K 5 HOH A 176 576 107 HOH HOH . K 5 HOH A 177 577 22 HOH HOH . K 5 HOH A 178 578 160 HOH HOH . K 5 HOH A 179 579 159 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id B _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 15.759 _atom_site.Cartn_y 4.824 _atom_site.Cartn_z -7.392 _atom_site.occupancy 0.51 _atom_site.B_iso_or_equiv 22.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 304 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #