data_7S1A
#
_model_server_result.job_id            UTwwphEgXIKKMj15XpMHnw 
_model_server_result.datetime_utc      '2024-11-10 01:25:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7s1a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":302}' 
#
_entry.id    7S1A 
#
_exptl.entry_id    7S1A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              60.052 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7S1A 
_cell.length_a            56.815 
_cell.length_b            56.815 
_cell.length_c            122.924 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7S1A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    'P 31' 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LYS 68 A LYS 65 1_555 A N MSE 69 A MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale2 A C MSE 69 A MSE 66 1_555 A N LYS 70 A LYS 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale3 A C GLY 75 A GLY 72 1_555 A N MSE 76 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale4 A C MSE 76 A MSE 73 1_555 A N ILE 77 A ILE 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale5 A C VAL 105 A VAL 102 1_555 A N MSE 106 A MSE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale6 A C MSE 106 A MSE 103 1_555 A N ALA 107 A ALA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale7 A C ASP 130 A ASP 127 1_555 A N MSE 131 A MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale8 A C MSE 131 A MSE 128 1_555 A N LYS 132 A LYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale9 A C ASN 154 A ASN 151 1_555 A N MSE 155 A MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale10 A C MSE 155 A MSE 152 1_555 A N LEU 156 A LEU 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale11 A C LYS 176 A LYS 173 1_555 A N MSE 177 A MSE 174 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.33 ? 
covale ? covale12 A C LYS 176 A LYS 173 1_555 A N MSE 177 A MSE 174 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.323 ? 
covale ? covale13 A C MSE 177 A MSE 174 1_555 A N ASN 178 A ASN 175 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale14 A C MSE 177 A MSE 174 1_555 A N ASN 178 A ASN 175 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale15 B C LYS 68 B LYS 65 1_555 B N MSE 69 B MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale16 B C MSE 69 B MSE 66 1_555 B N LYS 70 B LYS 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale17 B C GLY 75 B GLY 72 1_555 B N MSE 76 B MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale18 B C MSE 76 B MSE 73 1_555 B N ILE 77 B ILE 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale19 B C VAL 105 B VAL 102 1_555 B N MSE 106 B MSE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale20 B C MSE 106 B MSE 103 1_555 B N ALA 107 B ALA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale21 B C ASP 130 B ASP 127 1_555 B N MSE 131 B MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale22 B C MSE 131 B MSE 128 1_555 B N LYS 132 B LYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale23 B C ASN 154 B ASN 151 1_555 B N MSE 155 B MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale24 B C MSE 155 B MSE 152 1_555 B N LEU 156 B LEU 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale25 B C LYS 176 B LYS 173 1_555 B N MSE 177 B MSE 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale26 B C MSE 177 B MSE 174 1_555 B N ASN 178 B ASN 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
#
_chem_comp.formula           'C2 H4 O2' 
_chem_comp.formula_weight    60.052 
_chem_comp.id                ACY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACY doub 1 n n 
C OXT ACY sing 2 n n 
C CH3 ACY sing 3 n n 
OXT HXT ACY sing 4 n n 
CH3 H1 ACY sing 5 n n 
CH3 H2 ACY sing 6 n n 
CH3 H3 ACY sing 7 n n 
#
_atom_sites.entry_id                     7S1A 
_atom_sites.fract_transf_matrix[1][1]    0.017601 
_atom_sites.fract_transf_matrix[1][2]    0.010162 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020324 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008135 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 301 301 FMN FMN . 
D 3 CL A 1 302 304 CL CL . 
E 4 ACY A 1 303 305 ACY ACY . 
F 2 FMN B 1 301 301 FMN FMN . 
G 4 ACY B 1 302 302 ACY ACY . 
H 3 CL B 1 303 303 CL CL . 
I 3 CL B 1 304 304 CL CL . 
J 5 HOH A 1 401 39 HOH HOH . 
J 5 HOH A 2 402 105 HOH HOH . 
J 5 HOH A 3 403 65 HOH HOH . 
J 5 HOH A 4 404 106 HOH HOH . 
J 5 HOH A 5 405 9 HOH HOH . 
J 5 HOH A 6 406 84 HOH HOH . 
J 5 HOH A 7 407 101 HOH HOH . 
J 5 HOH A 8 408 6 HOH HOH . 
J 5 HOH A 9 409 87 HOH HOH . 
J 5 HOH A 10 410 20 HOH HOH . 
J 5 HOH A 11 411 102 HOH HOH . 
J 5 HOH A 12 412 24 HOH HOH . 
J 5 HOH A 13 413 98 HOH HOH . 
J 5 HOH A 14 414 10 HOH HOH . 
J 5 HOH A 15 415 55 HOH HOH . 
J 5 HOH A 16 416 34 HOH HOH . 
J 5 HOH A 17 417 79 HOH HOH . 
J 5 HOH A 18 418 48 HOH HOH . 
J 5 HOH A 19 419 92 HOH HOH . 
J 5 HOH A 20 420 5 HOH HOH . 
J 5 HOH A 21 421 73 HOH HOH . 
J 5 HOH A 22 422 31 HOH HOH . 
J 5 HOH A 23 423 21 HOH HOH . 
J 5 HOH A 24 424 78 HOH HOH . 
J 5 HOH A 25 425 91 HOH HOH . 
J 5 HOH A 26 426 116 HOH HOH . 
J 5 HOH A 27 427 72 HOH HOH . 
J 5 HOH A 28 428 11 HOH HOH . 
J 5 HOH A 29 429 15 HOH HOH . 
J 5 HOH A 30 430 89 HOH HOH . 
J 5 HOH A 31 431 53 HOH HOH . 
J 5 HOH A 32 432 16 HOH HOH . 
J 5 HOH A 33 433 45 HOH HOH . 
J 5 HOH A 34 434 97 HOH HOH . 
J 5 HOH A 35 435 3 HOH HOH . 
J 5 HOH A 36 436 66 HOH HOH . 
J 5 HOH A 37 437 115 HOH HOH . 
J 5 HOH A 38 438 12 HOH HOH . 
J 5 HOH A 39 439 51 HOH HOH . 
J 5 HOH A 40 440 90 HOH HOH . 
J 5 HOH A 41 441 46 HOH HOH . 
J 5 HOH A 42 442 83 HOH HOH . 
J 5 HOH A 43 443 96 HOH HOH . 
J 5 HOH A 44 444 17 HOH HOH . 
J 5 HOH A 45 445 77 HOH HOH . 
J 5 HOH A 46 446 60 HOH HOH . 
J 5 HOH A 47 447 103 HOH HOH . 
J 5 HOH A 48 448 71 HOH HOH . 
J 5 HOH A 49 449 2 HOH HOH . 
J 5 HOH A 50 450 110 HOH HOH . 
J 5 HOH A 51 451 80 HOH HOH . 
J 5 HOH A 52 452 29 HOH HOH . 
J 5 HOH A 53 453 57 HOH HOH . 
J 5 HOH A 54 454 69 HOH HOH . 
J 5 HOH A 55 455 108 HOH HOH . 
J 5 HOH A 56 456 27 HOH HOH . 
J 5 HOH A 57 457 99 HOH HOH . 
J 5 HOH A 58 458 50 HOH HOH . 
J 5 HOH A 59 459 40 HOH HOH . 
J 5 HOH A 60 460 85 HOH HOH . 
K 5 HOH B 1 401 76 HOH HOH . 
K 5 HOH B 2 402 44 HOH HOH . 
K 5 HOH B 3 403 117 HOH HOH . 
K 5 HOH B 4 404 61 HOH HOH . 
K 5 HOH B 5 405 8 HOH HOH . 
K 5 HOH B 6 406 47 HOH HOH . 
K 5 HOH B 7 407 19 HOH HOH . 
K 5 HOH B 8 408 94 HOH HOH . 
K 5 HOH B 9 409 104 HOH HOH . 
K 5 HOH B 10 410 41 HOH HOH . 
K 5 HOH B 11 411 52 HOH HOH . 
K 5 HOH B 12 412 59 HOH HOH . 
K 5 HOH B 13 413 100 HOH HOH . 
K 5 HOH B 14 414 111 HOH HOH . 
K 5 HOH B 15 415 88 HOH HOH . 
K 5 HOH B 16 416 112 HOH HOH . 
K 5 HOH B 17 417 93 HOH HOH . 
K 5 HOH B 18 418 74 HOH HOH . 
K 5 HOH B 19 419 113 HOH HOH . 
K 5 HOH B 20 420 28 HOH HOH . 
K 5 HOH B 21 421 13 HOH HOH . 
K 5 HOH B 22 422 33 HOH HOH . 
K 5 HOH B 23 423 42 HOH HOH . 
K 5 HOH B 24 424 35 HOH HOH . 
K 5 HOH B 25 425 18 HOH HOH . 
K 5 HOH B 26 426 23 HOH HOH . 
K 5 HOH B 27 427 54 HOH HOH . 
K 5 HOH B 28 428 82 HOH HOH . 
K 5 HOH B 29 429 30 HOH HOH . 
K 5 HOH B 30 430 119 HOH HOH . 
K 5 HOH B 31 431 22 HOH HOH . 
K 5 HOH B 32 432 58 HOH HOH . 
K 5 HOH B 33 433 49 HOH HOH . 
K 5 HOH B 34 434 26 HOH HOH . 
K 5 HOH B 35 435 37 HOH HOH . 
K 5 HOH B 36 436 109 HOH HOH . 
K 5 HOH B 37 437 95 HOH HOH . 
K 5 HOH B 38 438 118 HOH HOH . 
K 5 HOH B 39 439 36 HOH HOH . 
K 5 HOH B 40 440 43 HOH HOH . 
K 5 HOH B 41 441 62 HOH HOH . 
K 5 HOH B 42 442 114 HOH HOH . 
K 5 HOH B 43 443 4 HOH HOH . 
K 5 HOH B 44 444 68 HOH HOH . 
K 5 HOH B 45 445 25 HOH HOH . 
K 5 HOH B 46 446 32 HOH HOH . 
K 5 HOH B 47 447 81 HOH HOH . 
K 5 HOH B 48 448 7 HOH HOH . 
K 5 HOH B 49 449 107 HOH HOH . 
K 5 HOH B 50 450 70 HOH HOH . 
K 5 HOH B 51 451 14 HOH HOH . 
K 5 HOH B 52 452 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACY . . . G 4 -3.897 52.3 3.386 1 57.03 ? C ACY 302 B 1 
HETATM 2 O O ACY . . . G 4 -4.719 53.191 3.194 1 55.08 ? O ACY 302 B 1 
HETATM 3 O OXT ACY . . . G 4 -3.699 51.657 4.486 1 52.58 ? OXT ACY 302 B 1 
HETATM 4 C CH3 ACY . . . G 4 -2.977 51.85 2.298 1 52.82 ? CH3 ACY 302 B 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#